RNA–Protein interactions for RNA: ENST00000589296.5

CYTH1-209, Transcript of cytohesin 1, humanhuman

TSL 5 BASIC

Gene CYTH1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH1-209ENST00000589296 NISCHQ9Y2I1 1504 aa40.68■■■■■ 4.1
CYTH1-209ENST00000589296 CCDC180Q9P1Z9 1646 aa35.44■■■■□ 3.26
CYTH1-209ENST00000589296 ZCCHC6Q5VYS8 1495 aaKnown RBP34.19■■■■□ 3.06
CYTH1-209ENST00000589296 DCAF1Q9Y4B6 1507 aa33.66■■■□□ 2.98
CYTH1-209ENST00000589296 DCAF8L2P0C7V8 631 aa33.61■■■□□ 2.97
CYTH1-209ENST00000589296 ABCC9O60706 1549 aa33.44■■■□□ 2.94
CYTH1-209ENST00000589296 MYO15BQ96JP2 1530 aa33.25■■■□□ 2.91
CYTH1-209ENST00000589296 SHROOM4Q9ULL8 1493 aa33.23■■■□□ 2.91
CYTH1-209ENST00000589296 NACADO15069 1562 aa33.02■■■□□ 2.88
CYTH1-209ENST00000589296 RB1CC1Q8TDY2 1594 aa32.72■■■□□ 2.83
CYTH1-209ENST00000589296 SCRIBQ14160 1630 aa32.59■■■□□ 2.81
CYTH1-209ENST00000589296 SUPT5HO00267 1087 aaKnown RBP32.31■■■□□ 2.76
CYTH1-209ENST00000589296 UNC13AQ9UPW8 1703 aa31.96■■■□□ 2.71
CYTH1-209ENST00000589296 BICRAQ9NZM4 1560 aa31.66■■■□□ 2.66
CYTH1-209ENST00000589296 CHIC1Q5VXU3 224 aa31.61■■■□□ 2.65
CYTH1-209ENST00000589296 RSF1Q96T23 1441 aaPredicted RBP31.59■■■□□ 2.65
CYTH1-209ENST00000589296 CECR2Q9BXF3 1484 aa31.57■■■□□ 2.64
CYTH1-209ENST00000589296 PABPN1Q86U42 306 aaKnown RBP eCLIP31.56■■■□□ 2.64
CYTH1-209ENST00000589296 BAZ1AQ9NRL2 1556 aaPredicted RBP31.43■■■□□ 2.62
CYTH1-209ENST00000589296 MROH2BQ7Z745 1585 aa31.41■■■□□ 2.62
CYTH1-209ENST00000589296 SMARCA4P51532 1647 aa31.25■■■□□ 2.59
CYTH1-209ENST00000589296 WIZO95785 1651 aa31.15■■■□□ 2.58
CYTH1-209ENST00000589296 HRCP23327 699 aa30.95■■■□□ 2.54
CYTH1-209ENST00000589296 PEG3Q9GZU2 1588 aa30.87■■■□□ 2.53
CYTH1-209ENST00000589296 TOP2AP11388 1531 aaKnown RBP30.87■■■□□ 2.53
CYTH1-209ENST00000589296 SMARCA2P51531 1590 aa30.75■■■□□ 2.51
CYTH1-209ENST00000589296 EIF4G1Q04637 1599 aaKnown RBP30.74■■■□□ 2.51
CYTH1-209ENST00000589296 ATAD2BQ9ULI0 1458 aa30.73■■■□□ 2.51
CYTH1-209ENST00000589296 PCGF6Q9BYE7 350 aa30.7■■■□□ 2.51
CYTH1-209ENST00000589296 BAZ1BQ9UIG0 1483 aaKnown RBP30.59■■■□□ 2.49
CYTH1-209ENST00000589296 CCDC88BA6NC98 1476 aa30.55■■■□□ 2.48
CYTH1-209ENST00000589296 LOC105371045A0A1W2PR82 267 aa30.53■■■□□ 2.48
CYTH1-209ENST00000589296 NCAPD3P42695 1498 aa30.47■■■□□ 2.47
CYTH1-209ENST00000589296 HMGXB3Q12766 1538 aa30.44■■■□□ 2.46
CYTH1-209ENST00000589296 TRIM26Q12899 539 aaPredicted RBP30.27■■■□□ 2.44
CYTH1-209ENST00000589296 CC2D2AQ9P2K1 1620 aa30.26■■■□□ 2.44
CYTH1-209ENST00000589296 TRIM41Q8WV44 630 aa30.23■■■□□ 2.43
CYTH1-209ENST00000589296 PPARGC1BQ86YN6 1023 aaKnown RBP30.01■■■□□ 2.4
CYTH1-209ENST00000589296 ABCC8Q09428 1581 aa29.9■■■□□ 2.38
CYTH1-209ENST00000589296 ZEB1P37275 1124 aaPredicted RBP29.83■■■□□ 2.37
CYTH1-209ENST00000589296 CFTRP13569 1480 aa29.81■■■□□ 2.36
CYTH1-209ENST00000589296 FAM9AQ8IZU1 332 aaPredicted RBP29.79■■■□□ 2.36
CYTH1-209ENST00000589296 WRNQ14191 1432 aaPredicted RBP eCLIP29.76■■■□□ 2.352e-6■■■■■ 64.8
CYTH1-209ENST00000589296 CADPSQ9ULU8 1353 aa29.71■■■□□ 2.35
CYTH1-209ENST00000589296 PRDM2Q13029 1718 aa29.63■■■□□ 2.33
CYTH1-209ENST00000589296 SYNJ1O43426 1573 aa29.58■■■□□ 2.33
CYTH1-209ENST00000589296 TOP2BQ02880 1626 aa29.48■■■□□ 2.31
CYTH1-209ENST00000589296 BIVM-ERCC5R4GMW8 1640 aa29.44■■■□□ 2.3
CYTH1-209ENST00000589296 LAMC3Q9Y6N6 1575 aa29.43■■■□□ 2.3
CYTH1-209ENST00000589296 EEA1Q15075 1411 aa29.41■■■□□ 2.3
CYTH1-209ENST00000589296 DNAJC5BQ9UF47 199 aa29.4■■■□□ 2.3
CYTH1-209ENST00000589296 EHMT2Q96KQ7 1210 aa29.39■■■□□ 2.29
CYTH1-209ENST00000589296 CUX1P39880 1505 aa29.38■■■□□ 2.29
CYTH1-209ENST00000589296 SOGA1O94964 1423 aa29.37■■■□□ 2.29
CYTH1-209ENST00000589296 FANCD2Q9BXW9 1451 aa29.37■■■□□ 2.29
CYTH1-209ENST00000589296 NESP48681 1621 aa29.36■■■□□ 2.29
CYTH1-209ENST00000589296 PDS5BQ9NTI5 1447 aa29.24■■■□□ 2.27
CYTH1-209ENST00000589296 RUSC2Q8N2Y8 1516 aa29.23■■■□□ 2.27
CYTH1-209ENST00000589296 CSRNP3Q8WYN3 585 aa29.21■■■□□ 2.27
CYTH1-209ENST00000589296 CEP164Q9UPV0 1460 aa29.19■■■□□ 2.26
CYTH1-209ENST00000589296 DNMBPQ6XZF7 1577 aa29.11■■■□□ 2.25
CYTH1-209ENST00000589296 FGD5Q6ZNL6 1462 aa29.06■■■□□ 2.24
CYTH1-209ENST00000589296 TOPBP1Q92547 1522 aa29.05■■■□□ 2.24
CYTH1-209ENST00000589296 KIF27Q86VH2 1401 aa29.03■■■□□ 2.24
CYTH1-209ENST00000589296 TNIKQ9UKE5 1360 aa29.02■■■□□ 2.24
CYTH1-209ENST00000589296 KIF21AQ7Z4S6 1674 aa29■■■□□ 2.23
CYTH1-209ENST00000589296 CEP162Q5TB80 1403 aa28.99■■■□□ 2.23
CYTH1-209ENST00000589296 GOLGA3Q08378 1498 aa28.98■■■□□ 2.23
CYTH1-209ENST00000589296 KIF21BO75037 1637 aa28.97■■■□□ 2.23
CYTH1-209ENST00000589296 URB2Q14146 1524 aaKnown RBP28.97■■■□□ 2.23
CYTH1-209ENST00000589296 POLA1P09884 1462 aaPredicted RBP28.91■■■□□ 2.22
CYTH1-209ENST00000589296 CUX2O14529 1486 aa28.9■■■□□ 2.22
CYTH1-209ENST00000589296 CCER1Q8TC90 406 aaPredicted RBP28.89■■■□□ 2.22
CYTH1-209ENST00000589296 UBTFP17480 764 aaKnown RBP28.87■■■□□ 2.21
CYTH1-209ENST00000589296 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.83■■■□□ 2.21
CYTH1-209ENST00000589296 ABCA10Q8WWZ4 1543 aa28.82■■■□□ 2.2
CYTH1-209ENST00000589296 MRC2Q9UBG0 1479 aa28.82■■■□□ 2.2
CYTH1-209ENST00000589296 PRXQ9BXM0 1461 aa28.81■■■□□ 2.2
CYTH1-209ENST00000589296 RAD54L2Q9Y4B4 1467 aa28.8■■■□□ 2.2
CYTH1-209ENST00000589296 ERICH3Q5RHP9 1530 aa28.78■■■□□ 2.2
CYTH1-209ENST00000589296 RAPGEF2Q9Y4G8 1499 aa28.78■■■□□ 2.2
CYTH1-209ENST00000589296 ERCC6Q03468 1493 aa28.73■■■□□ 2.19
CYTH1-209ENST00000589296 IGF1RP08069 1367 aa28.72■■■□□ 2.19
CYTH1-209ENST00000589296 WDR97A6NE52 1622 aa28.67■■■□□ 2.18
CYTH1-209ENST00000589296 WDR62O43379 1518 aa28.65■■■□□ 2.18
CYTH1-209ENST00000589296 CARMIL1Q5VZK9 1371 aa28.6■■■□□ 2.17
CYTH1-209ENST00000589296 TARBP1Q13395 1621 aaKnown RBP28.58■■■□□ 2.17
CYTH1-209ENST00000589296 ABCA5Q8WWZ7 1642 aa28.55■■■□□ 2.16
CYTH1-209ENST00000589296 TDRD9Q8NDG6 1382 aaKnown RBP28.53■■■□□ 2.16
CYTH1-209ENST00000589296 GAPVD1Q14C86 1478 aa28.53■■■□□ 2.16
CYTH1-209ENST00000589296 TTBK1Q5TCY1 1321 aaPredicted RBP28.53■■■□□ 2.16
CYTH1-209ENST00000589296 THOC2Q8NI27 1593 aaKnown RBP28.52■■■□□ 2.16
CYTH1-209ENST00000589296 CLIP1P30622 1438 aa28.51■■■□□ 2.15
CYTH1-209ENST00000589296 CUL7Q14999 1698 aa28.51■■■□□ 2.15
CYTH1-209ENST00000589296 IFT140Q96RY7 1462 aa28.5■■■□□ 2.15
CYTH1-209ENST00000589296 SCAF1Q9H7N4 1312 aaKnown RBP28.48■■■□□ 2.15
CYTH1-209ENST00000589296 PELP1Q8IZL8 1130 aaKnown RBP28.42■■■□□ 2.14
CYTH1-209ENST00000589296 DIEXFQ68CQ4 756 aaKnown RBP28.41■■■□□ 2.14
CYTH1-209ENST00000589296 VPS8Q8N3P4 1428 aa28.38■■■□□ 2.13
CYTH1-209ENST00000589296 RANGAP1P46060 587 aaPredicted RBP28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms