RNA–Protein interactions for RNA: ENST00000479192.1

ZNF3-213, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-213ENST00000479192 NISCHQ9Y2I1 1504 aa27.77■■■□□ 2.04
ZNF3-213ENST00000479192 CCDC180Q9P1Z9 1646 aa25.04■■□□□ 1.6
ZNF3-213ENST00000479192 ABCC9O60706 1549 aa24.71■■□□□ 1.55
ZNF3-213ENST00000479192 RB1CC1Q8TDY2 1594 aa23.68■■□□□ 1.38
ZNF3-213ENST00000479192 NACADO15069 1562 aa23.52■■□□□ 1.36
ZNF3-213ENST00000479192 UNC13AQ9UPW8 1703 aa23.33■■□□□ 1.32
ZNF3-213ENST00000479192 DCAF8L2P0C7V8 631 aa23.3■■□□□ 1.32
ZNF3-213ENST00000479192 MYO15BQ96JP2 1530 aa23.21■■□□□ 1.31
ZNF3-213ENST00000479192 ZCCHC6Q5VYS8 1495 aaKnown RBP23.05■■□□□ 1.28
ZNF3-213ENST00000479192 DCAF1Q9Y4B6 1507 aa22.98■■□□□ 1.27
ZNF3-213ENST00000479192 BICRAQ9NZM4 1560 aa22.94■■□□□ 1.26
ZNF3-213ENST00000479192 PABPN1Q86U42 306 aaKnown RBP eCLIP22.94■■□□□ 1.26
ZNF3-213ENST00000479192 DNAJC5BQ9UF47 199 aa22.94■■□□□ 1.26
ZNF3-213ENST00000479192 SCRIBQ14160 1630 aa22.73■■□□□ 1.23
ZNF3-213ENST00000479192 SHROOM4Q9ULL8 1493 aa22.66■■□□□ 1.22
ZNF3-213ENST00000479192 CC2D2AQ9P2K1 1620 aa22.42■■□□□ 1.18
ZNF3-213ENST00000479192 EIF4G1Q04637 1599 aaKnown RBP22.38■■□□□ 1.17
ZNF3-213ENST00000479192 CECR2Q9BXF3 1484 aa22.24■■□□□ 1.15
ZNF3-213ENST00000479192 SMARCA4P51532 1647 aa21.71■■□□□ 1.07
ZNF3-213ENST00000479192 NCAPD3P42695 1498 aa21.63■■□□□ 1.05
ZNF3-213ENST00000479192 SMARCA2P51531 1590 aa21.61■■□□□ 1.05
ZNF3-213ENST00000479192 BAZ1AQ9NRL2 1556 aaPredicted RBP21.59■■□□□ 1.05
ZNF3-213ENST00000479192 ATAD2BQ9ULI0 1458 aa21.58■■□□□ 1.05
ZNF3-213ENST00000479192 HMGXB3Q12766 1538 aa21.57■■□□□ 1.04
ZNF3-213ENST00000479192 PEG3Q9GZU2 1588 aa21.48■■□□□ 1.03
ZNF3-213ENST00000479192 BAZ1BQ9UIG0 1483 aaKnown RBP21.43■■□□□ 1.02
ZNF3-213ENST00000479192 MROH2BQ7Z745 1585 aa21.39■■□□□ 1.01
ZNF3-213ENST00000479192 ERCC6Q03468 1493 aa21.35■■□□□ 1.01
ZNF3-213ENST00000479192 CUX2O14529 1486 aa21.27■■□□□ 1
ZNF3-213ENST00000479192 NESP48681 1621 aa21.26■□□□□ 0.99
ZNF3-213ENST00000479192 WIZO95785 1651 aa21.24■□□□□ 0.99
ZNF3-213ENST00000479192 LAMC3Q9Y6N6 1575 aa21.23■□□□□ 0.99
ZNF3-213ENST00000479192 KIF21AQ7Z4S6 1674 aa21.18■□□□□ 0.98
ZNF3-213ENST00000479192 THOC2Q8NI27 1593 aaKnown RBP21.13■□□□□ 0.97
ZNF3-213ENST00000479192 PDS5BQ9NTI5 1447 aa21.01■□□□□ 0.95
ZNF3-213ENST00000479192 DNAJC5Q9H3Z4 198 aa21■□□□□ 0.95
ZNF3-213ENST00000479192 CADPSQ9ULU8 1353 aa20.96■□□□□ 0.95
ZNF3-213ENST00000479192 RSF1Q96T23 1441 aaPredicted RBP20.95■□□□□ 0.94
ZNF3-213ENST00000479192 TOP2AP11388 1531 aaKnown RBP20.94■□□□□ 0.94
ZNF3-213ENST00000479192 PRDM2Q13029 1718 aa20.91■□□□□ 0.94
ZNF3-213ENST00000479192 MRC2Q9UBG0 1479 aa20.84■□□□□ 0.93
ZNF3-213ENST00000479192 WDR62O43379 1518 aa20.82■□□□□ 0.92
ZNF3-213ENST00000479192 CEP164Q9UPV0 1460 aa20.81■□□□□ 0.92
ZNF3-213ENST00000479192 CFTRP13569 1480 aa20.77■□□□□ 0.92
ZNF3-213ENST00000479192 FANCD2Q9BXW9 1451 aa20.76■□□□□ 0.91
ZNF3-213ENST00000479192 CCDC88BA6NC98 1476 aa20.63■□□□□ 0.89
ZNF3-213ENST00000479192 URB2Q14146 1524 aaKnown RBP20.58■□□□□ 0.89
ZNF3-213ENST00000479192 TOPBP1Q92547 1522 aa20.41■□□□□ 0.86
ZNF3-213ENST00000479192 ABCC8Q09428 1581 aa20.4■□□□□ 0.86
ZNF3-213ENST00000479192 DNMBPQ6XZF7 1577 aa20.39■□□□□ 0.85
ZNF3-213ENST00000479192 IFT140Q96RY7 1462 aa20.37■□□□□ 0.85
ZNF3-213ENST00000479192 EIF4G3O43432 1585 aaKnown RBP20.3■□□□□ 0.84
ZNF3-213ENST00000479192 ZNF608Q9ULD9 1512 aaPredicted RBP20.29■□□□□ 0.84
ZNF3-213ENST00000479192 AEBP2Q6ZN18 517 aaPredicted RBP20.29■□□□□ 0.84
ZNF3-213ENST00000479192 TARBP1Q13395 1621 aaKnown RBP20.27■□□□□ 0.84
ZNF3-213ENST00000479192 OSCARQ8IYS5 282 aa20.25■□□□□ 0.83
ZNF3-213ENST00000479192 CHD1O14646 1710 aa20.22■□□□□ 0.83
ZNF3-213ENST00000479192 POLA1P09884 1462 aaPredicted RBP20.19■□□□□ 0.82
ZNF3-213ENST00000479192 TRIM41Q8WV44 630 aa20.16■□□□□ 0.82
ZNF3-213ENST00000479192 WDR97A6NE52 1622 aa20.12■□□□□ 0.81
ZNF3-213ENST00000479192 RIMBP3CA6NJZ7 1639 aa20.12■□□□□ 0.81
ZNF3-213ENST00000479192 RIMBP3BA6NNM3 1639 aa20.12■□□□□ 0.81
ZNF3-213ENST00000479192 RIMBP3Q9UFD9 1639 aa20.12■□□□□ 0.81
ZNF3-213ENST00000479192 AQRO60306 1485 aaKnown RBP eCLIP20.11■□□□□ 0.81
ZNF3-213ENST00000479192 SUPT5HO00267 1087 aaKnown RBP20.1■□□□□ 0.81
ZNF3-213ENST00000479192 CUX1P39880 1505 aa20.1■□□□□ 0.81
ZNF3-213ENST00000479192 FGD5Q6ZNL6 1462 aa20.1■□□□□ 0.81
ZNF3-213ENST00000479192 RAD54L2Q9Y4B4 1467 aa20.09■□□□□ 0.81
ZNF3-213ENST00000479192 SOGA1O94964 1423 aa20.07■□□□□ 0.8
ZNF3-213ENST00000479192 PBRM1Q86U86 1689 aa20.05■□□□□ 0.8
ZNF3-213ENST00000479192 ARHGEF11O15085 1522 aa20■□□□□ 0.79
ZNF3-213ENST00000479192 TDRD9Q8NDG6 1382 aaKnown RBP19.98■□□□□ 0.79
ZNF3-213ENST00000479192 SNAPC4Q5SXM2 1469 aa19.95■□□□□ 0.78
ZNF3-213ENST00000479192 FBLN2P98095 1184 aa19.94■□□□□ 0.78
ZNF3-213ENST00000479192 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
ZNF3-213ENST00000479192 MAGI1Q96QZ7 1491 aaPredicted RBP19.92■□□□□ 0.78
ZNF3-213ENST00000479192 GRIN2BQ13224 1484 aa19.92■□□□□ 0.78
ZNF3-213ENST00000479192 ABCA5Q8WWZ7 1642 aa19.91■□□□□ 0.78
ZNF3-213ENST00000479192 SYNJ1O43426 1573 aa19.89■□□□□ 0.77
ZNF3-213ENST00000479192 TOP2BQ02880 1626 aa19.88■□□□□ 0.77
ZNF3-213ENST00000479192 ABCA10Q8WWZ4 1543 aa19.87■□□□□ 0.77
ZNF3-213ENST00000479192 GAPVD1Q14C86 1478 aa19.86■□□□□ 0.77
ZNF3-213ENST00000479192 CLASP1Q7Z460 1538 aa19.85■□□□□ 0.77
ZNF3-213ENST00000479192 SYNJ2O15056 1496 aa19.84■□□□□ 0.77
ZNF3-213ENST00000479192 CHMP7Q8WUX9 453 aaPredicted RBP19.81■□□□□ 0.76
ZNF3-213ENST00000479192 WRNQ14191 1432 aaPredicted RBP eCLIP19.79■□□□□ 0.76
ZNF3-213ENST00000479192 ARAP1Q96P48 1450 aa19.78■□□□□ 0.76
ZNF3-213ENST00000479192 CYB5RLQ6IPT4 315 aa19.75■□□□□ 0.75
ZNF3-213ENST00000479192 ADAMTS12P58397 1594 aa19.74■□□□□ 0.75
ZNF3-213ENST00000479192 GRIN2AQ12879 1464 aa19.67■□□□□ 0.74
ZNF3-213ENST00000479192 ERICH3Q5RHP9 1530 aa19.66■□□□□ 0.74
ZNF3-213ENST00000479192 CEP170Q5SW79 1584 aa19.63■□□□□ 0.73
ZNF3-213ENST00000479192 FHAD1B1AJZ9 1412 aa19.6■□□□□ 0.73
ZNF3-213ENST00000479192 SHROOM2Q13796 1616 aa19.58■□□□□ 0.72
ZNF3-213ENST00000479192 NUP160Q12769 1436 aa19.57■□□□□ 0.72
ZNF3-213ENST00000479192 ERCC6L2Q5T890 1561 aa19.53■□□□□ 0.72
ZNF3-213ENST00000479192 TRHP20396 242 aaPredicted RBP19.51■□□□□ 0.71
ZNF3-213ENST00000479192 CUL7Q14999 1698 aa19.49■□□□□ 0.71
ZNF3-213ENST00000479192 RUSC2Q8N2Y8 1516 aa19.46■□□□□ 0.71
ZNF3-213ENST00000479192 KIF27Q86VH2 1401 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms