RNA–Protein interactions for RNA: ENST00000478705.5

SFT2D1-202, Transcript of SFT2 domain containing 1, humanhuman

TSL 2

Gene SFT2D1, Length 659 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D1-202ENST00000478705 NISCHQ9Y2I1 1504 aa41.51■■■■■ 4.24
SFT2D1-202ENST00000478705 CCDC180Q9P1Z9 1646 aa37.21■■■■□ 3.55
SFT2D1-202ENST00000478705 ABCC9O60706 1549 aa37.13■■■■□ 3.53
SFT2D1-202ENST00000478705 RB1CC1Q8TDY2 1594 aa35.35■■■■□ 3.25
SFT2D1-202ENST00000478705 NACADO15069 1562 aa35.14■■■■□ 3.22
SFT2D1-202ENST00000478705 DCAF8L2P0C7V8 631 aa34.86■■■■□ 3.17
SFT2D1-202ENST00000478705 DNAJC5BQ9UF47 199 aa34.82■■■■□ 3.16
SFT2D1-202ENST00000478705 MYO15BQ96JP2 1530 aa34.71■■■■□ 3.15
SFT2D1-202ENST00000478705 UNC13AQ9UPW8 1703 aa34.64■■■■□ 3.14
SFT2D1-202ENST00000478705 PABPN1Q86U42 306 aaKnown RBP eCLIP34.56■■■■□ 3.12
SFT2D1-202ENST00000478705 ZCCHC6Q5VYS8 1495 aaKnown RBP34.45■■■■□ 3.1
SFT2D1-202ENST00000478705 BICRAQ9NZM4 1560 aa34.42■■■■□ 3.1
SFT2D1-202ENST00000478705 DCAF1Q9Y4B6 1507 aa34.3■■■■□ 3.08
SFT2D1-202ENST00000478705 SCRIBQ14160 1630 aa33.9■■■■□ 3.02
SFT2D1-202ENST00000478705 SHROOM4Q9ULL8 1493 aa33.88■■■■□ 3.01
SFT2D1-202ENST00000478705 CC2D2AQ9P2K1 1620 aa33.57■■■□□ 2.96
SFT2D1-202ENST00000478705 EIF4G1Q04637 1599 aaKnown RBP33.51■■■□□ 2.96
SFT2D1-202ENST00000478705 CECR2Q9BXF3 1484 aa33.43■■■□□ 2.94
SFT2D1-202ENST00000478705 NCAPD3P42695 1498 aa32.47■■■□□ 2.79
SFT2D1-202ENST00000478705 ATAD2BQ9ULI0 1458 aa32.39■■■□□ 2.78
SFT2D1-202ENST00000478705 SMARCA4P51532 1647 aa32.37■■■□□ 2.77
SFT2D1-202ENST00000478705 SMARCA2P51531 1590 aa32.25■■■□□ 2.75
SFT2D1-202ENST00000478705 HMGXB3Q12766 1538 aa32.23■■■□□ 2.75
SFT2D1-202ENST00000478705 BAZ1AQ9NRL2 1556 aaPredicted RBP32.19■■■□□ 2.74
SFT2D1-202ENST00000478705 PEG3Q9GZU2 1588 aa32.08■■■□□ 2.73
SFT2D1-202ENST00000478705 BAZ1BQ9UIG0 1483 aaKnown RBP32.03■■■□□ 2.72
SFT2D1-202ENST00000478705 MROH2BQ7Z745 1585 aa32.01■■■□□ 2.71
SFT2D1-202ENST00000478705 ERCC6Q03468 1493 aa31.98■■■□□ 2.71
SFT2D1-202ENST00000478705 CUX2O14529 1486 aa31.96■■■□□ 2.71
SFT2D1-202ENST00000478705 NESP48681 1621 aa31.95■■■□□ 2.71
SFT2D1-202ENST00000478705 DNAJC5Q9H3Z4 198 aa31.85■■■□□ 2.69
SFT2D1-202ENST00000478705 LAMC3Q9Y6N6 1575 aa31.7■■■□□ 2.67
SFT2D1-202ENST00000478705 THOC2Q8NI27 1593 aaKnown RBP31.64■■■□□ 2.65
SFT2D1-202ENST00000478705 WIZO95785 1651 aa31.62■■■□□ 2.65
SFT2D1-202ENST00000478705 KIF21AQ7Z4S6 1674 aa31.54■■■□□ 2.64
SFT2D1-202ENST00000478705 PDS5BQ9NTI5 1447 aa31.47■■■□□ 2.63
SFT2D1-202ENST00000478705 CADPSQ9ULU8 1353 aa31.45■■■□□ 2.63
SFT2D1-202ENST00000478705 RSF1Q96T23 1441 aaPredicted RBP31.35■■■□□ 2.61
SFT2D1-202ENST00000478705 MRC2Q9UBG0 1479 aa31.24■■■□□ 2.59
SFT2D1-202ENST00000478705 TOP2AP11388 1531 aaKnown RBP31.21■■■□□ 2.59
SFT2D1-202ENST00000478705 WDR62O43379 1518 aa31.19■■■□□ 2.58
SFT2D1-202ENST00000478705 CFTRP13569 1480 aa31.14■■■□□ 2.57
SFT2D1-202ENST00000478705 CEP164Q9UPV0 1460 aa31.12■■■□□ 2.57
SFT2D1-202ENST00000478705 FANCD2Q9BXW9 1451 aa31.1■■■□□ 2.57
SFT2D1-202ENST00000478705 URB2Q14146 1524 aaKnown RBP30.88■■■□□ 2.53
SFT2D1-202ENST00000478705 CCDC88BA6NC98 1476 aa30.86■■■□□ 2.53
SFT2D1-202ENST00000478705 PRDM2Q13029 1718 aa30.84■■■□□ 2.53
SFT2D1-202ENST00000478705 TOPBP1Q92547 1522 aa30.54■■■□□ 2.48
SFT2D1-202ENST00000478705 IFT140Q96RY7 1462 aa30.49■■■□□ 2.47
SFT2D1-202ENST00000478705 ZNF608Q9ULD9 1512 aaPredicted RBP30.48■■■□□ 2.47
SFT2D1-202ENST00000478705 OSCARQ8IYS5 282 aa30.45■■■□□ 2.47
SFT2D1-202ENST00000478705 DNMBPQ6XZF7 1577 aa30.43■■■□□ 2.46
SFT2D1-202ENST00000478705 TRIM41Q8WV44 630 aa30.43■■■□□ 2.46
SFT2D1-202ENST00000478705 ABCC8Q09428 1581 aa30.41■■■□□ 2.46
SFT2D1-202ENST00000478705 EIF4G3O43432 1585 aaKnown RBP30.32■■■□□ 2.44
SFT2D1-202ENST00000478705 TARBP1Q13395 1621 aaKnown RBP30.29■■■□□ 2.44
SFT2D1-202ENST00000478705 POLA1P09884 1462 aaPredicted RBP30.25■■■□□ 2.43
SFT2D1-202ENST00000478705 AQRO60306 1485 aaKnown RBP eCLIP30.19■■■□□ 2.421e-13■■■■■ 33.4
SFT2D1-202ENST00000478705 RIMBP3CA6NJZ7 1639 aa30.14■■■□□ 2.41
SFT2D1-202ENST00000478705 RIMBP3BA6NNM3 1639 aa30.14■■■□□ 2.41
SFT2D1-202ENST00000478705 RIMBP3Q9UFD9 1639 aa30.14■■■□□ 2.41
SFT2D1-202ENST00000478705 RAD54L2Q9Y4B4 1467 aa30.13■■■□□ 2.41
SFT2D1-202ENST00000478705 CHD1O14646 1710 aa30.07■■■□□ 2.4
SFT2D1-202ENST00000478705 CUX1P39880 1505 aa30.06■■■□□ 2.4
SFT2D1-202ENST00000478705 FGD5Q6ZNL6 1462 aa30.06■■■□□ 2.4
SFT2D1-202ENST00000478705 SOGA1O94964 1423 aa30.05■■■□□ 2.4
SFT2D1-202ENST00000478705 ARHGEF11O15085 1522 aa30.05■■■□□ 2.4
SFT2D1-202ENST00000478705 TDRD9Q8NDG6 1382 aaKnown RBP30.01■■■□□ 2.39
SFT2D1-202ENST00000478705 WDR97A6NE52 1622 aa29.94■■■□□ 2.38
SFT2D1-202ENST00000478705 SUPT5HO00267 1087 aaKnown RBP29.92■■■□□ 2.38
SFT2D1-202ENST00000478705 SNAPC4Q5SXM2 1469 aa29.88■■■□□ 2.37
SFT2D1-202ENST00000478705 FBLN2P98095 1184 aa29.87■■■□□ 2.37
SFT2D1-202ENST00000478705 GRIN2BQ13224 1484 aa29.8■■■□□ 2.36
SFT2D1-202ENST00000478705 MAGI1Q96QZ7 1491 aaPredicted RBP29.79■■■□□ 2.36
SFT2D1-202ENST00000478705 ARAP1Q96P48 1450 aa29.77■■■□□ 2.36
SFT2D1-202ENST00000478705 CLASP1Q7Z460 1538 aa29.76■■■□□ 2.35
SFT2D1-202ENST00000478705 CYB5RLQ6IPT4 315 aa29.74■■■□□ 2.35
SFT2D1-202ENST00000478705 ABCA10Q8WWZ4 1543 aa29.72■■■□□ 2.35
SFT2D1-202ENST00000478705 PBRM1Q86U86 1689 aa29.72■■■□□ 2.35
SFT2D1-202ENST00000478705 GAPVD1Q14C86 1478 aa29.7■■■□□ 2.35
SFT2D1-202ENST00000478705 ABCA5Q8WWZ7 1642 aa29.7■■■□□ 2.34
SFT2D1-202ENST00000478705 SYNJ2O15056 1496 aa29.69■■■□□ 2.34
SFT2D1-202ENST00000478705 CHMP7Q8WUX9 453 aaPredicted RBP29.68■■■□□ 2.34
SFT2D1-202ENST00000478705 SYNJ1O43426 1573 aa29.67■■■□□ 2.34
SFT2D1-202ENST00000478705 BIVM-ERCC5R4GMW8 1640 aa29.6■■■□□ 2.33
SFT2D1-202ENST00000478705 TOP2BQ02880 1626 aa29.58■■■□□ 2.33
SFT2D1-202ENST00000478705 WRNQ14191 1432 aaPredicted RBP eCLIP29.55■■■□□ 2.32
SFT2D1-202ENST00000478705 ADAMTS12P58397 1594 aa29.45■■■□□ 2.31
SFT2D1-202ENST00000478705 GRIN2AQ12879 1464 aa29.43■■■□□ 2.3
SFT2D1-202ENST00000478705 CEP170Q5SW79 1584 aa29.36■■■□□ 2.29
SFT2D1-202ENST00000478705 NUP160Q12769 1436 aa29.36■■■□□ 2.29
SFT2D1-202ENST00000478705 TRHP20396 242 aaPredicted RBP29.34■■■□□ 2.29
SFT2D1-202ENST00000478705 ERICH3Q5RHP9 1530 aa29.34■■■□□ 2.29
SFT2D1-202ENST00000478705 FHAD1B1AJZ9 1412 aa29.33■■■□□ 2.29
SFT2D1-202ENST00000478705 ERCC6L2Q5T890 1561 aa29.31■■■□□ 2.28
SFT2D1-202ENST00000478705 SHROOM2Q13796 1616 aa29.23■■■□□ 2.27
SFT2D1-202ENST00000478705 RUSC2Q8N2Y8 1516 aa29.04■■■□□ 2.24
SFT2D1-202ENST00000478705 PRG4Q92954 1404 aaPredicted RBP29.02■■■□□ 2.24
SFT2D1-202ENST00000478705 JPH4Q96JJ6 628 aa28.99■■■□□ 2.23
SFT2D1-202ENST00000478705 IGF1RP08069 1367 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms