RNA–Protein interactions for RNA: ENST00000526942.5

RPUSD4-203, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 5

Gene RPUSD4, Length 1,791 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-203ENST00000526942 NISCHQ9Y2I1 1504 aa29.46■■■□□ 2.31
RPUSD4-203ENST00000526942 ABCC9O60706 1549 aa26.92■■□□□ 1.9
RPUSD4-203ENST00000526942 CCDC180Q9P1Z9 1646 aa26.59■■□□□ 1.85
RPUSD4-203ENST00000526942 DNAJC5BQ9UF47 199 aa25.54■■□□□ 1.68
RPUSD4-203ENST00000526942 RB1CC1Q8TDY2 1594 aa25.48■■□□□ 1.67
RPUSD4-203ENST00000526942 NACADO15069 1562 aa25.21■■□□□ 1.63
RPUSD4-203ENST00000526942 PABPN1Q86U42 306 aaKnown RBP eCLIP24.99■■□□□ 1.59
RPUSD4-203ENST00000526942 DCAF8L2P0C7V8 631 aa24.96■■□□□ 1.59
RPUSD4-203ENST00000526942 UNC13AQ9UPW8 1703 aa24.88■■□□□ 1.57
RPUSD4-203ENST00000526942 MYO15BQ96JP2 1530 aa24.77■■□□□ 1.56
RPUSD4-203ENST00000526942 BICRAQ9NZM4 1560 aa24.76■■□□□ 1.55
RPUSD4-203ENST00000526942 SHROOM4Q9ULL8 1493 aa24.4■■□□□ 1.5
RPUSD4-203ENST00000526942 ZCCHC6Q5VYS8 1495 aaKnown RBP24.36■■□□□ 1.49
RPUSD4-203ENST00000526942 DCAF1Q9Y4B6 1507 aa24.33■■□□□ 1.49
RPUSD4-203ENST00000526942 CC2D2AQ9P2K1 1620 aa24.3■■□□□ 1.48
RPUSD4-203ENST00000526942 CECR2Q9BXF3 1484 aa24.28■■□□□ 1.48
RPUSD4-203ENST00000526942 SCRIBQ14160 1630 aa24.21■■□□□ 1.47
RPUSD4-203ENST00000526942 EIF4G1Q04637 1599 aaKnown RBP24.17■■□□□ 1.46
RPUSD4-203ENST00000526942 DNAJC5Q9H3Z4 198 aa23.69■■□□□ 1.38
RPUSD4-203ENST00000526942 CUX2O14529 1486 aa23.35■■□□□ 1.33
RPUSD4-203ENST00000526942 NCAPD3P42695 1498 aa23.28■■□□□ 1.32
RPUSD4-203ENST00000526942 ERCC6Q03468 1493 aa23.26■■□□□ 1.31
RPUSD4-203ENST00000526942 ATAD2BQ9ULI0 1458 aa23.17■■□□□ 1.3
RPUSD4-203ENST00000526942 HMGXB3Q12766 1538 aa23.1■■□□□ 1.29
RPUSD4-203ENST00000526942 SMARCA2P51531 1590 aa23.08■■□□□ 1.29
RPUSD4-203ENST00000526942 SMARCA4P51532 1647 aa23.06■■□□□ 1.28
RPUSD4-203ENST00000526942 NESP48681 1621 aa23.03■■□□□ 1.28
RPUSD4-203ENST00000526942 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
RPUSD4-203ENST00000526942 BAZ1AQ9NRL2 1556 aaPredicted RBP22.89■■□□□ 1.26
RPUSD4-203ENST00000526942 THOC2Q8NI27 1593 aaKnown RBP22.88■■□□□ 1.25
RPUSD4-203ENST00000526942 PEG3Q9GZU2 1588 aa22.85■■□□□ 1.25
RPUSD4-203ENST00000526942 LAMC3Q9Y6N6 1575 aa22.82■■□□□ 1.24
RPUSD4-203ENST00000526942 KIF21AQ7Z4S6 1674 aa22.72■■□□□ 1.23
RPUSD4-203ENST00000526942 MROH2BQ7Z745 1585 aa22.7■■□□□ 1.22
RPUSD4-203ENST00000526942 PDS5BQ9NTI5 1447 aa22.69■■□□□ 1.22
RPUSD4-203ENST00000526942 CADPSQ9ULU8 1353 aa22.55■■□□□ 1.2
RPUSD4-203ENST00000526942 MRC2Q9UBG0 1479 aa22.53■■□□□ 1.2
RPUSD4-203ENST00000526942 TRIM41Q8WV44 630 aa22.51■■□□□ 1.19
RPUSD4-203ENST00000526942 WDR62O43379 1518 aa22.48■■□□□ 1.19
RPUSD4-203ENST00000526942 WIZO95785 1651 aa22.4■■□□□ 1.18
RPUSD4-203ENST00000526942 CEP164Q9UPV0 1460 aa22.37■■□□□ 1.17
RPUSD4-203ENST00000526942 FANCD2Q9BXW9 1451 aa22.31■■□□□ 1.16
RPUSD4-203ENST00000526942 CFTRP13569 1480 aa22.23■■□□□ 1.15
RPUSD4-203ENST00000526942 OSCARQ8IYS5 282 aa22.18■■□□□ 1.14
RPUSD4-203ENST00000526942 URB2Q14146 1524 aaKnown RBP22.15■■□□□ 1.14
RPUSD4-203ENST00000526942 TOP2AP11388 1531 aaKnown RBP22.11■■□□□ 1.13
RPUSD4-203ENST00000526942 RSF1Q96T23 1441 aaPredicted RBP22.1■■□□□ 1.13
RPUSD4-203ENST00000526942 PRDM2Q13029 1718 aa21.98■■□□□ 1.11
RPUSD4-203ENST00000526942 RIMBP3CA6NJZ7 1639 aa21.97■■□□□ 1.11
RPUSD4-203ENST00000526942 RIMBP3BA6NNM3 1639 aa21.97■■□□□ 1.11
RPUSD4-203ENST00000526942 RIMBP3Q9UFD9 1639 aa21.97■■□□□ 1.11
RPUSD4-203ENST00000526942 ZNF608Q9ULD9 1512 aaPredicted RBP21.93■■□□□ 1.1
RPUSD4-203ENST00000526942 IFT140Q96RY7 1462 aa21.92■■□□□ 1.1
RPUSD4-203ENST00000526942 ARHGEF11O15085 1522 aa21.87■■□□□ 1.09
RPUSD4-203ENST00000526942 CCDC88BA6NC98 1476 aa21.85■■□□□ 1.09
RPUSD4-203ENST00000526942 TOPBP1Q92547 1522 aa21.85■■□□□ 1.09
RPUSD4-203ENST00000526942 EIF4G3O43432 1585 aaKnown RBP21.8■■□□□ 1.08
RPUSD4-203ENST00000526942 ABCC8Q09428 1581 aa21.76■■□□□ 1.07
RPUSD4-203ENST00000526942 DNMBPQ6XZF7 1577 aa21.74■■□□□ 1.07
RPUSD4-203ENST00000526942 CYB5RLQ6IPT4 315 aa21.69■■□□□ 1.06
RPUSD4-203ENST00000526942 TARBP1Q13395 1621 aaKnown RBP21.69■■□□□ 1.06
RPUSD4-203ENST00000526942 CHD1O14646 1710 aa21.68■■□□□ 1.06
RPUSD4-203ENST00000526942 AQRO60306 1485 aaKnown RBP eCLIP21.68■■□□□ 1.064e-7■■■□□ 18.4
RPUSD4-203ENST00000526942 ARAP1Q96P48 1450 aa21.64■■□□□ 1.05
RPUSD4-203ENST00000526942 POLA1P09884 1462 aaPredicted RBP21.61■■□□□ 1.05
RPUSD4-203ENST00000526942 FBLN2P98095 1184 aa21.58■■□□□ 1.04
RPUSD4-203ENST00000526942 TRHP20396 242 aaPredicted RBP21.56■■□□□ 1.04
RPUSD4-203ENST00000526942 RAD54L2Q9Y4B4 1467 aa21.53■■□□□ 1.04
RPUSD4-203ENST00000526942 TDRD9Q8NDG6 1382 aaKnown RBP21.49■■□□□ 1.03
RPUSD4-203ENST00000526942 SOGA1O94964 1423 aa21.48■■□□□ 1.03
RPUSD4-203ENST00000526942 SNAPC4Q5SXM2 1469 aa21.46■■□□□ 1.03
RPUSD4-203ENST00000526942 CLASP1Q7Z460 1538 aa21.45■■□□□ 1.02
RPUSD4-203ENST00000526942 WDR97A6NE52 1622 aa21.44■■□□□ 1.02
RPUSD4-203ENST00000526942 FGD5Q6ZNL6 1462 aa21.42■■□□□ 1.02
RPUSD4-203ENST00000526942 SYNJ1O43426 1573 aa21.39■■□□□ 1.02
RPUSD4-203ENST00000526942 MAGI1Q96QZ7 1491 aaPredicted RBP21.38■■□□□ 1.01
RPUSD4-203ENST00000526942 CHMP7Q8WUX9 453 aaPredicted RBP21.37■■□□□ 1.01
RPUSD4-203ENST00000526942 CUX1P39880 1505 aa21.36■■□□□ 1.01
RPUSD4-203ENST00000526942 GRIN2BQ13224 1484 aa21.35■■□□□ 1.01
RPUSD4-203ENST00000526942 SYNJ2O15056 1496 aa21.32■■□□□ 1
RPUSD4-203ENST00000526942 PBRM1Q86U86 1689 aa21.24■□□□□ 0.99
RPUSD4-203ENST00000526942 GAPVD1Q14C86 1478 aa21.23■□□□□ 0.99
RPUSD4-203ENST00000526942 AEBP2Q6ZN18 517 aaPredicted RBP21.18■□□□□ 0.98
RPUSD4-203ENST00000526942 ABCA5Q8WWZ7 1642 aa21.17■□□□□ 0.98
RPUSD4-203ENST00000526942 ABCA10Q8WWZ4 1543 aa21.16■□□□□ 0.98
RPUSD4-203ENST00000526942 ERCC6L2Q5T890 1561 aa21.08■□□□□ 0.97
RPUSD4-203ENST00000526942 GRIN2AQ12879 1464 aa21.08■□□□□ 0.97
RPUSD4-203ENST00000526942 ADAMTS12P58397 1594 aa21.04■□□□□ 0.96
RPUSD4-203ENST00000526942 NUP160Q12769 1436 aa21.03■□□□□ 0.96
RPUSD4-203ENST00000526942 CEP170Q5SW79 1584 aa21.03■□□□□ 0.96
RPUSD4-203ENST00000526942 WRNQ14191 1432 aaPredicted RBP eCLIP21■□□□□ 0.95
RPUSD4-203ENST00000526942 SHROOM2Q13796 1616 aa20.97■□□□□ 0.95
RPUSD4-203ENST00000526942 FHAD1B1AJZ9 1412 aa20.95■□□□□ 0.94
RPUSD4-203ENST00000526942 BIVM-ERCC5R4GMW8 1640 aa20.92■□□□□ 0.94
RPUSD4-203ENST00000526942 TOP2BQ02880 1626 aa20.92■□□□□ 0.94
RPUSD4-203ENST00000526942 ERICH3Q5RHP9 1530 aa20.89■□□□□ 0.93
RPUSD4-203ENST00000526942 KIF13AQ9H1H9 1805 aa20.86■□□□□ 0.93
RPUSD4-203ENST00000526942 PRG4Q92954 1404 aaPredicted RBP20.84■□□□□ 0.93
RPUSD4-203ENST00000526942 SUPT5HO00267 1087 aaKnown RBP20.83■□□□□ 0.93
RPUSD4-203ENST00000526942 JPH4Q96JJ6 628 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms