RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 NISCHQ9Y2I1 1504 aa30.45■■■□□ 2.46
FARP1-242ENST00000627049 DCAF8L2P0C7V8 631 aa29.36■■■□□ 2.29
FARP1-242ENST00000627049 SUPT5HO00267 1087 aaKnown RBP29.34■■■□□ 2.29
FARP1-242ENST00000627049 SHROOM4Q9ULL8 1493 aa28.87■■■□□ 2.21
FARP1-242ENST00000627049 PCGF6Q9BYE7 350 aa28.38■■■□□ 2.13
FARP1-242ENST00000627049 PELP1Q8IZL8 1130 aaKnown RBP27.93■■■□□ 2.06
FARP1-242ENST00000627049 HRCP23327 699 aa27.83■■■□□ 2.05
FARP1-242ENST00000627049 EHMT2Q96KQ7 1210 aa27.8■■■□□ 2.04
FARP1-242ENST00000627049 ZEB1P37275 1124 aaPredicted RBP27.74■■■□□ 2.03
FARP1-242ENST00000627049 FAM9AQ8IZU1 332 aaPredicted RBP27.46■■□□□ 1.99
FARP1-242ENST00000627049 CENPBP07199 599 aaPredicted RBP27.44■■□□□ 1.98
FARP1-242ENST00000627049 MYT1Q01538 1121 aa27.29■■□□□ 1.96
FARP1-242ENST00000627049 TRIM26Q12899 539 aaPredicted RBP27.27■■□□□ 1.96
FARP1-242ENST00000627049 CHIC1Q5VXU3 224 aa27.19■■□□□ 1.94
FARP1-242ENST00000627049 CCER1Q8TC90 406 aaPredicted RBP27.18■■□□□ 1.94
FARP1-242ENST00000627049 PPARGC1BQ86YN6 1023 aaKnown RBP27.18■■□□□ 1.94
FARP1-242ENST00000627049 TRIM41Q8WV44 630 aa27.16■■□□□ 1.94
FARP1-242ENST00000627049 TTBK1Q5TCY1 1321 aaPredicted RBP27.03■■□□□ 1.92
FARP1-242ENST00000627049 APLP2Q06481 763 aa26.98■■□□□ 1.91
FARP1-242ENST00000627049 LOC105371045A0A1W2PR82 267 aa26.94■■□□□ 1.9
FARP1-242ENST00000627049 YTHDC1Q96MU7 727 aaKnown RBP26.71■■□□□ 1.87
FARP1-242ENST00000627049 UBTFP17480 764 aaKnown RBP26.42■■□□□ 1.82
FARP1-242ENST00000627049 ERICH6Q7L0X2 663 aa26.34■■□□□ 1.81
FARP1-242ENST00000627049 DIEXFQ68CQ4 756 aaKnown RBP26.31■■□□□ 1.8
FARP1-242ENST00000627049 RANGAP1P46060 587 aaPredicted RBP26.26■■□□□ 1.79
FARP1-242ENST00000627049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.26■■□□□ 1.79
FARP1-242ENST00000627049 NEFLP07196 543 aa26.19■■□□□ 1.78
FARP1-242ENST00000627049 GTF3C3Q9Y5Q9 886 aa26.16■■□□□ 1.78
FARP1-242ENST00000627049 ACIN1Q9UKV3 1341 aaKnown RBP26.04■■□□□ 1.76
FARP1-242ENST00000627049 DCAF1Q9Y4B6 1507 aa26■■□□□ 1.75
FARP1-242ENST00000627049 HNRNPUL2Q1KMD3 747 aaKnown RBP25.93■■□□□ 1.74
FARP1-242ENST00000627049 SCAF1Q9H7N4 1312 aaKnown RBP25.77■■□□□ 1.72
FARP1-242ENST00000627049 ZNF316A6NFI3 1004 aaPredicted RBP25.7■■□□□ 1.7
FARP1-242ENST00000627049 MYO15BQ96JP2 1530 aa25.69■■□□□ 1.7
FARP1-242ENST00000627049 ATP1B4Q9UN42 357 aaPredicted RBP25.68■■□□□ 1.7
FARP1-242ENST00000627049 NEUROD1Q13562 356 aa25.58■■□□□ 1.69
FARP1-242ENST00000627049 ITGAEP38570 1179 aa25.55■■□□□ 1.68
FARP1-242ENST00000627049 ZCCHC6Q5VYS8 1495 aaKnown RBP25.49■■□□□ 1.67
FARP1-242ENST00000627049 BCANQ96GW7 911 aa25.32■■□□□ 1.64
FARP1-242ENST00000627049 CCDC180Q9P1Z9 1646 aa25.23■■□□□ 1.63
FARP1-242ENST00000627049 CLSPNQ9HAW4 1339 aa25.21■■□□□ 1.63
FARP1-242ENST00000627049 CSRNP3Q8WYN3 585 aa25.09■■□□□ 1.61
FARP1-242ENST00000627049 RTL5Q5HYW3 569 aaPredicted RBP25.03■■□□□ 1.6
FARP1-242ENST00000627049 ANP32CO43423 234 aa25.01■■□□□ 1.6
FARP1-242ENST00000627049 CDK11AQ9UQ88 783 aaPredicted RBP25.01■■□□□ 1.59
FARP1-242ENST00000627049 MIER1Q8N108 512 aa25■■□□□ 1.59
FARP1-242ENST00000627049 DAXXQ9UER7 740 aaPredicted RBP24.98■■□□□ 1.59
FARP1-242ENST00000627049 FAM50AQ14320 339 aaKnown RBP24.93■■□□□ 1.58
FARP1-242ENST00000627049 POLR3GLQ9BT43 218 aa24.93■■□□□ 1.58
FARP1-242ENST00000627049 FKBP8Q14318 412 aa24.87■■□□□ 1.57
FARP1-242ENST00000627049 CNGB1Q14028 1251 aaPredicted RBP24.85■■□□□ 1.57
FARP1-242ENST00000627049 SCRIBQ14160 1630 aa24.67■■□□□ 1.54
FARP1-242ENST00000627049 ABCC9O60706 1549 aa24.67■■□□□ 1.54
FARP1-242ENST00000627049 RSF1Q96T23 1441 aaPredicted RBP24.65■■□□□ 1.54
FARP1-242ENST00000627049 DDX10Q13206 875 aaKnown RBP24.62■■□□□ 1.53
FARP1-242ENST00000627049 ANP32EQ9BTT0 268 aa24.6■■□□□ 1.53
FARP1-242ENST00000627049 TRIM52Q96A61 297 aa24.58■■□□□ 1.53
FARP1-242ENST00000627049 CEP162Q5TB80 1403 aa24.53■■□□□ 1.52
FARP1-242ENST00000627049 PABPN1Q86U42 306 aaKnown RBP eCLIP24.51■■□□□ 1.512e-7■□□□□ 10.7
FARP1-242ENST00000627049 MYT1LQ9UL68 1186 aa24.51■■□□□ 1.51
FARP1-242ENST00000627049 ANP32AP39687 249 aaKnown RBP24.49■■□□□ 1.51
FARP1-242ENST00000627049 HNRNPUQ00839 825 aaKnown RBP eCLIP24.47■■□□□ 1.516e-6■■□□□ 13.5
FARP1-242ENST00000627049 SUPT16HQ9Y5B9 1047 aaKnown RBP24.42■■□□□ 1.5
FARP1-242ENST00000627049 CLIP1P30622 1438 aa24.39■■□□□ 1.49
FARP1-242ENST00000627049 TNIKQ9UKE5 1360 aa24.36■■□□□ 1.49
FARP1-242ENST00000627049 EEA1Q15075 1411 aa24.35■■□□□ 1.49
FARP1-242ENST00000627049 TONSLQ96HA7 1378 aa24.35■■□□□ 1.49
FARP1-242ENST00000627049 GOLGA3Q08378 1498 aa24.29■■□□□ 1.48
FARP1-242ENST00000627049 P3H3Q8IVL6 736 aa24.27■■□□□ 1.48
FARP1-242ENST00000627049 RB1CC1Q8TDY2 1594 aa24.26■■□□□ 1.47
FARP1-242ENST00000627049 ZNF326Q5BKZ1 582 aaKnown RBP24.25■■□□□ 1.47
FARP1-242ENST00000627049 NPM2Q86SE8 214 aaKnown RBP24.22■■□□□ 1.47
FARP1-242ENST00000627049 FAM9BQ8IZU0 186 aa24.21■■□□□ 1.47
FARP1-242ENST00000627049 NBR1Q14596 966 aa24.21■■□□□ 1.47
FARP1-242ENST00000627049 IRX6P78412 446 aaPredicted RBP24.2■■□□□ 1.46
FARP1-242ENST00000627049 HIRIP3Q9BW71 556 aaPredicted RBP24.17■■□□□ 1.46
FARP1-242ENST00000627049 ZBTB47Q9UFB7 747 aaPredicted RBP24.14■■□□□ 1.46
FARP1-242ENST00000627049 BCL11AQ9H165 835 aa24.13■■□□□ 1.45
FARP1-242ENST00000627049 CCDC136Q96JN2 1154 aa24.11■■□□□ 1.45
FARP1-242ENST00000627049 MRS2Q9HD23 443 aa24.04■■□□□ 1.44
FARP1-242ENST00000627049 EIF5BO60841 1220 aaKnown RBP24.03■■□□□ 1.44
FARP1-242ENST00000627049 TSHZ2Q9NRE2 1034 aa24.02■■□□□ 1.44
FARP1-242ENST00000627049 CEP164Q9UPV0 1460 aa24.02■■□□□ 1.44
FARP1-242ENST00000627049 RBM19Q9Y4C8 960 aaKnown RBP23.98■■□□□ 1.43
FARP1-242ENST00000627049 WRNQ14191 1432 aaPredicted RBP eCLIP23.98■■□□□ 1.43
FARP1-242ENST00000627049 SOGA1O94964 1423 aa23.93■■□□□ 1.42
FARP1-242ENST00000627049 SLC4A1APQ9BWU0 796 aaKnown RBP23.89■■□□□ 1.42
FARP1-242ENST00000627049 CECR2Q9BXF3 1484 aa23.89■■□□□ 1.42
FARP1-242ENST00000627049 EIF4G2P78344 907 aaKnown RBP eCLIP23.88■■□□□ 1.41
FARP1-242ENST00000627049 TMC1Q8TDI8 760 aa23.87■■□□□ 1.41
FARP1-242ENST00000627049 PPP4R2Q9NY27 417 aa23.87■■□□□ 1.41
FARP1-242ENST00000627049 SIN3AQ96ST3 1273 aa23.85■■□□□ 1.41
FARP1-242ENST00000627049 CANXP27824 592 aaKnown RBP23.81■■□□□ 1.4
FARP1-242ENST00000627049 CCER2I3L3R5 266 aa23.81■■□□□ 1.4
FARP1-242ENST00000627049 ARID3CA6NKF2 412 aa23.81■■□□□ 1.4
FARP1-242ENST00000627049 CHIC2Q9UKJ5 165 aa23.81■■□□□ 1.4
FARP1-242ENST00000627049 SALL2Q9Y467 1007 aaPredicted RBP23.8■■□□□ 1.4
FARP1-242ENST00000627049 VPS8Q8N3P4 1428 aa23.8■■□□□ 1.4
FARP1-242ENST00000627049 CCNB3Q8WWL7 1395 aa23.77■■□□□ 1.4
FARP1-242ENST00000627049 NOP58Q9Y2X3 529 aaKnown RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms