RNA–Protein interactions for RNA: ENST00000405600.5

CGREF1-206, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 4 BASIC

Gene CGREF1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-206ENST00000405600 NISCHQ9Y2I1 1504 aa39.7■■■■□ 3.95
CGREF1-206ENST00000405600 CCDC180Q9P1Z9 1646 aa35.41■■■■□ 3.26
CGREF1-206ENST00000405600 ABCC9O60706 1549 aa35.29■■■■□ 3.24
CGREF1-206ENST00000405600 DCAF8L2P0C7V8 631 aa33.74■■■□□ 2.99
CGREF1-206ENST00000405600 RB1CC1Q8TDY2 1594 aa33.63■■■□□ 2.97
CGREF1-206ENST00000405600 NACADO15069 1562 aa33.43■■■□□ 2.94
CGREF1-206ENST00000405600 PABPN1Q86U42 306 aaKnown RBP eCLIP32.99■■■□□ 2.87
CGREF1-206ENST00000405600 MYO15BQ96JP2 1530 aa32.98■■■□□ 2.87
CGREF1-206ENST00000405600 ZCCHC6Q5VYS8 1495 aaKnown RBP32.97■■■□□ 2.87
CGREF1-206ENST00000405600 UNC13AQ9UPW8 1703 aa32.87■■■□□ 2.85
CGREF1-206ENST00000405600 DCAF1Q9Y4B6 1507 aa32.8■■■□□ 2.84
CGREF1-206ENST00000405600 DNAJC5BQ9UF47 199 aa32.79■■■□□ 2.84
CGREF1-206ENST00000405600 BICRAQ9NZM4 1560 aa32.59■■■□□ 2.81
CGREF1-206ENST00000405600 SCRIBQ14160 1630 aa32.46■■■□□ 2.79
CGREF1-206ENST00000405600 SHROOM4Q9ULL8 1493 aa32.07■■■□□ 2.72
CGREF1-206ENST00000405600 CC2D2AQ9P2K1 1620 aa31.82■■■□□ 2.68
CGREF1-206ENST00000405600 EIF4G1Q04637 1599 aaKnown RBP31.81■■■□□ 2.68
CGREF1-206ENST00000405600 CECR2Q9BXF3 1484 aa31.71■■■□□ 2.67
CGREF1-206ENST00000405600 SMARCA4P51532 1647 aa30.91■■■□□ 2.54
CGREF1-206ENST00000405600 NCAPD3P42695 1498 aa30.85■■■□□ 2.53
CGREF1-206ENST00000405600 ATAD2BQ9ULI0 1458 aa30.85■■■□□ 2.53
CGREF1-206ENST00000405600 BAZ1AQ9NRL2 1556 aaPredicted RBP30.8■■■□□ 2.52
CGREF1-206ENST00000405600 SMARCA2P51531 1590 aa30.78■■■□□ 2.52
CGREF1-206ENST00000405600 HMGXB3Q12766 1538 aa30.64■■■□□ 2.5
CGREF1-206ENST00000405600 MROH2BQ7Z745 1585 aa30.64■■■□□ 2.5
CGREF1-206ENST00000405600 BAZ1BQ9UIG0 1483 aaKnown RBP30.63■■■□□ 2.49
CGREF1-206ENST00000405600 PEG3Q9GZU2 1588 aa30.5■■■□□ 2.47
CGREF1-206ENST00000405600 ERCC6Q03468 1493 aa30.47■■■□□ 2.47
CGREF1-206ENST00000405600 NESP48681 1621 aa30.39■■■□□ 2.46
CGREF1-206ENST00000405600 WIZO95785 1651 aa30.33■■■□□ 2.45
CGREF1-206ENST00000405600 CUX2O14529 1486 aa30.14■■■□□ 2.42
CGREF1-206ENST00000405600 RSF1Q96T23 1441 aaPredicted RBP30.14■■■□□ 2.42
CGREF1-206ENST00000405600 LAMC3Q9Y6N6 1575 aa30.13■■■□□ 2.41
CGREF1-206ENST00000405600 CADPSQ9ULU8 1353 aa30.01■■■□□ 2.39
CGREF1-206ENST00000405600 PDS5BQ9NTI5 1447 aa30■■■□□ 2.39
CGREF1-206ENST00000405600 KIF21AQ7Z4S6 1674 aa29.99■■■□□ 2.39
CGREF1-206ENST00000405600 THOC2Q8NI27 1593 aaKnown RBP29.9■■■□□ 2.38
CGREF1-206ENST00000405600 TOP2AP11388 1531 aaKnown RBP29.89■■■□□ 2.38
CGREF1-206ENST00000405600 DNAJC5Q9H3Z4 198 aa29.83■■■□□ 2.37
CGREF1-206ENST00000405600 MRC2Q9UBG0 1479 aa29.7■■■□□ 2.35
CGREF1-206ENST00000405600 CFTRP13569 1480 aa29.68■■■□□ 2.34
CGREF1-206ENST00000405600 FANCD2Q9BXW9 1451 aa29.68■■■□□ 2.34
CGREF1-206ENST00000405600 CEP164Q9UPV0 1460 aa29.68■■■□□ 2.34
CGREF1-206ENST00000405600 CCDC88BA6NC98 1476 aa29.61■■■□□ 2.33
CGREF1-206ENST00000405600 WDR62O43379 1518 aa29.57■■■□□ 2.32
CGREF1-206ENST00000405600 PRDM2Q13029 1718 aa29.41■■■□□ 2.3
CGREF1-206ENST00000405600 URB2Q14146 1524 aaKnown RBP29.39■■■□□ 2.3
CGREF1-206ENST00000405600 SUPT5HO00267 1087 aaKnown RBP29.35■■■□□ 2.29
CGREF1-206ENST00000405600 TOPBP1Q92547 1522 aa29.14■■■□□ 2.26
CGREF1-206ENST00000405600 ABCC8Q09428 1581 aa29.06■■■□□ 2.24
CGREF1-206ENST00000405600 DNMBPQ6XZF7 1577 aa29.04■■■□□ 2.24
CGREF1-206ENST00000405600 IFT140Q96RY7 1462 aa29.04■■■□□ 2.24
CGREF1-206ENST00000405600 ZNF608Q9ULD9 1512 aaPredicted RBP29.01■■■□□ 2.23
CGREF1-206ENST00000405600 OSCARQ8IYS5 282 aa28.97■■■□□ 2.23
CGREF1-206ENST00000405600 TRIM41Q8WV44 630 aa28.88■■■□□ 2.21
CGREF1-206ENST00000405600 POLA1P09884 1462 aaPredicted RBP28.85■■■□□ 2.21
CGREF1-206ENST00000405600 AQRO60306 1485 aaKnown RBP eCLIP28.84■■■□□ 2.21
CGREF1-206ENST00000405600 EIF4G3O43432 1585 aaKnown RBP28.84■■■□□ 2.21
CGREF1-206ENST00000405600 RAD54L2Q9Y4B4 1467 aa28.82■■■□□ 2.2
CGREF1-206ENST00000405600 TARBP1Q13395 1621 aaKnown RBP28.81■■■□□ 2.2
CGREF1-206ENST00000405600 SOGA1O94964 1423 aa28.8■■■□□ 2.2
CGREF1-206ENST00000405600 FGD5Q6ZNL6 1462 aa28.75■■■□□ 2.19
CGREF1-206ENST00000405600 CUX1P39880 1505 aa28.75■■■□□ 2.19
CGREF1-206ENST00000405600 FBLN2P98095 1184 aa28.74■■■□□ 2.19
CGREF1-206ENST00000405600 TDRD9Q8NDG6 1382 aaKnown RBP28.73■■■□□ 2.19
CGREF1-206ENST00000405600 CHD1O14646 1710 aa28.59■■■□□ 2.17
CGREF1-206ENST00000405600 SNAPC4Q5SXM2 1469 aa28.51■■■□□ 2.16
CGREF1-206ENST00000405600 CHMP7Q8WUX9 453 aaPredicted RBP28.49■■■□□ 2.15
CGREF1-206ENST00000405600 RIMBP3CA6NJZ7 1639 aa28.49■■■□□ 2.15
CGREF1-206ENST00000405600 RIMBP3BA6NNM3 1639 aa28.49■■■□□ 2.15
CGREF1-206ENST00000405600 RIMBP3Q9UFD9 1639 aa28.49■■■□□ 2.15
CGREF1-206ENST00000405600 WDR97A6NE52 1622 aa28.46■■■□□ 2.15
CGREF1-206ENST00000405600 WRNQ14191 1432 aaPredicted RBP eCLIP28.46■■■□□ 2.15
CGREF1-206ENST00000405600 GRIN2BQ13224 1484 aa28.46■■■□□ 2.15
CGREF1-206ENST00000405600 GAPVD1Q14C86 1478 aa28.42■■■□□ 2.14
CGREF1-206ENST00000405600 ARHGEF11O15085 1522 aa28.42■■■□□ 2.14
CGREF1-206ENST00000405600 ABCA10Q8WWZ4 1543 aa28.38■■■□□ 2.13
CGREF1-206ENST00000405600 PBRM1Q86U86 1689 aa28.38■■■□□ 2.13
CGREF1-206ENST00000405600 MAGI1Q96QZ7 1491 aaPredicted RBP28.38■■■□□ 2.13
CGREF1-206ENST00000405600 SYNJ1O43426 1573 aa28.38■■■□□ 2.13
CGREF1-206ENST00000405600 TOP2BQ02880 1626 aa28.36■■■□□ 2.13
CGREF1-206ENST00000405600 CYB5RLQ6IPT4 315 aa28.35■■■□□ 2.13
CGREF1-206ENST00000405600 BIVM-ERCC5R4GMW8 1640 aa28.34■■■□□ 2.13
CGREF1-206ENST00000405600 SYNJ2O15056 1496 aa28.31■■■□□ 2.12
CGREF1-206ENST00000405600 ABCA5Q8WWZ7 1642 aa28.3■■■□□ 2.12
CGREF1-206ENST00000405600 CLASP1Q7Z460 1538 aa28.17■■■□□ 2.1
CGREF1-206ENST00000405600 ARAP1Q96P48 1450 aa28.15■■■□□ 2.1
CGREF1-206ENST00000405600 ADAMTS12P58397 1594 aa28.08■■■□□ 2.09
CGREF1-206ENST00000405600 GRIN2AQ12879 1464 aa28.08■■■□□ 2.09
CGREF1-206ENST00000405600 FHAD1B1AJZ9 1412 aa28.05■■■□□ 2.08
CGREF1-206ENST00000405600 ERICH3Q5RHP9 1530 aa28.04■■■□□ 2.08
CGREF1-206ENST00000405600 CHIC1Q5VXU3 224 aa28.02■■■□□ 2.08
CGREF1-206ENST00000405600 TRHP20396 242 aaPredicted RBP28■■■□□ 2.07
CGREF1-206ENST00000405600 CEP170Q5SW79 1584 aa27.97■■■□□ 2.07
CGREF1-206ENST00000405600 NUP160Q12769 1436 aa27.92■■■□□ 2.06
CGREF1-206ENST00000405600 KIF27Q86VH2 1401 aa27.9■■■□□ 2.06
CGREF1-206ENST00000405600 AEBP2Q6ZN18 517 aaPredicted RBP27.88■■■□□ 2.05
CGREF1-206ENST00000405600 ERCC6L2Q5T890 1561 aa27.86■■■□□ 2.05
CGREF1-206ENST00000405600 IGF1RP08069 1367 aa27.81■■■□□ 2.04
CGREF1-206ENST00000405600 JPH4Q96JJ6 628 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms