RNA–Protein interactions for RNA: ENST00000595437.5

FARP1-214, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene FARP1, Length 4,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-214ENST00000595437 NISCHQ9Y2I1 1504 aa28.19■■■□□ 2.1
FARP1-214ENST00000595437 DCAF8L2P0C7V8 631 aa26.4■■□□□ 1.82
FARP1-214ENST00000595437 SUPT5HO00267 1087 aaKnown RBP25.54■■□□□ 1.68
FARP1-214ENST00000595437 SHROOM4Q9ULL8 1493 aa25.46■■□□□ 1.67
FARP1-214ENST00000595437 EHMT2Q96KQ7 1210 aa23.91■■□□□ 1.42
FARP1-214ENST00000595437 TRIM41Q8WV44 630 aa23.88■■□□□ 1.41
FARP1-214ENST00000595437 FAM9AQ8IZU1 332 aaPredicted RBP23.83■■□□□ 1.41
FARP1-214ENST00000595437 PCGF6Q9BYE7 350 aa23.73■■□□□ 1.39
FARP1-214ENST00000595437 APLP2Q06481 763 aa23.65■■□□□ 1.38
FARP1-214ENST00000595437 CHIC1Q5VXU3 224 aa23.59■■□□□ 1.37
FARP1-214ENST00000595437 CCDC180Q9P1Z9 1646 aa23.59■■□□□ 1.37
FARP1-214ENST00000595437 ZCCHC6Q5VYS8 1495 aaKnown RBP23.54■■□□□ 1.36
FARP1-214ENST00000595437 ZEB1P37275 1124 aaPredicted RBP23.45■■□□□ 1.34
FARP1-214ENST00000595437 ABCC9O60706 1549 aa23.33■■□□□ 1.33
FARP1-214ENST00000595437 UBTFP17480 764 aaKnown RBP23.24■■□□□ 1.31
FARP1-214ENST00000595437 TRIM26Q12899 539 aaPredicted RBP23.2■■□□□ 1.3
FARP1-214ENST00000595437 TTBK1Q5TCY1 1321 aaPredicted RBP23.14■■□□□ 1.29
FARP1-214ENST00000595437 LOC105371045A0A1W2PR82 267 aa23.1■■□□□ 1.29
FARP1-214ENST00000595437 CCER1Q8TC90 406 aaPredicted RBP23.07■■□□□ 1.28
FARP1-214ENST00000595437 HRCP23327 699 aa23.01■■□□□ 1.27
FARP1-214ENST00000595437 RANGAP1P46060 587 aaPredicted RBP22.98■■□□□ 1.27
FARP1-214ENST00000595437 SCRIBQ14160 1630 aa22.83■■□□□ 1.25
FARP1-214ENST00000595437 PELP1Q8IZL8 1130 aaKnown RBP22.81■■□□□ 1.24
FARP1-214ENST00000595437 PABPN1Q86U42 306 aaKnown RBP eCLIP22.76■■□□□ 1.232e-7■□□□□ 10.7
FARP1-214ENST00000595437 DCAF1Q9Y4B6 1507 aa22.75■■□□□ 1.23
FARP1-214ENST00000595437 PPARGC1BQ86YN6 1023 aaKnown RBP22.74■■□□□ 1.23
FARP1-214ENST00000595437 CENPBP07199 599 aaPredicted RBP22.72■■□□□ 1.23
FARP1-214ENST00000595437 ATP1B4Q9UN42 357 aaPredicted RBP22.68■■□□□ 1.22
FARP1-214ENST00000595437 NACADO15069 1562 aa22.52■■□□□ 1.2
FARP1-214ENST00000595437 RB1CC1Q8TDY2 1594 aa22.47■■□□□ 1.19
FARP1-214ENST00000595437 RSF1Q96T23 1441 aaPredicted RBP22.4■■□□□ 1.18
FARP1-214ENST00000595437 CSRNP3Q8WYN3 585 aa22.33■■□□□ 1.17
FARP1-214ENST00000595437 HNRNPUL2Q1KMD3 747 aaKnown RBP22.32■■□□□ 1.16
FARP1-214ENST00000595437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.23■■□□□ 1.15
FARP1-214ENST00000595437 ITGAEP38570 1179 aa22.18■■□□□ 1.14
FARP1-214ENST00000595437 MYO15BQ96JP2 1530 aa22.14■■□□□ 1.13
FARP1-214ENST00000595437 YTHDC1Q96MU7 727 aaKnown RBP22.08■■□□□ 1.12
FARP1-214ENST00000595437 BAZ1AQ9NRL2 1556 aaPredicted RBP22.05■■□□□ 1.12
FARP1-214ENST00000595437 EEA1Q15075 1411 aa21.98■■□□□ 1.11
FARP1-214ENST00000595437 DIEXFQ68CQ4 756 aaKnown RBP21.98■■□□□ 1.11
FARP1-214ENST00000595437 NEFLP07196 543 aa21.95■■□□□ 1.1
FARP1-214ENST00000595437 CECR2Q9BXF3 1484 aa21.91■■□□□ 1.1
FARP1-214ENST00000595437 FAM50AQ14320 339 aaKnown RBP21.89■■□□□ 1.09
FARP1-214ENST00000595437 BAZ1BQ9UIG0 1483 aaKnown RBP21.79■■□□□ 1.08
FARP1-214ENST00000595437 WRNQ14191 1432 aaPredicted RBP eCLIP21.78■■□□□ 1.08
FARP1-214ENST00000595437 MROH2BQ7Z745 1585 aa21.75■■□□□ 1.07
FARP1-214ENST00000595437 GOLGA3Q08378 1498 aa21.74■■□□□ 1.07
FARP1-214ENST00000595437 ZNF316A6NFI3 1004 aaPredicted RBP21.73■■□□□ 1.07
FARP1-214ENST00000595437 CLIP1P30622 1438 aa21.68■■□□□ 1.06
FARP1-214ENST00000595437 CEP162Q5TB80 1403 aa21.67■■□□□ 1.06
FARP1-214ENST00000595437 TNIKQ9UKE5 1360 aa21.67■■□□□ 1.06
FARP1-214ENST00000595437 CEP164Q9UPV0 1460 aa21.6■■□□□ 1.05
FARP1-214ENST00000595437 P3H3Q8IVL6 736 aa21.6■■□□□ 1.05
FARP1-214ENST00000595437 TRIM52Q96A61 297 aa21.58■■□□□ 1.04
FARP1-214ENST00000595437 ERICH6Q7L0X2 663 aa21.58■■□□□ 1.04
FARP1-214ENST00000595437 NEUROD1Q13562 356 aa21.57■■□□□ 1.04
FARP1-214ENST00000595437 CCDC88BA6NC98 1476 aa21.53■■□□□ 1.04
FARP1-214ENST00000595437 TOP2AP11388 1531 aaKnown RBP21.52■■□□□ 1.04
FARP1-214ENST00000595437 KIF27Q86VH2 1401 aa21.5■■□□□ 1.03
FARP1-214ENST00000595437 MYT1LQ9UL68 1186 aa21.48■■□□□ 1.03
FARP1-214ENST00000595437 SMARCA2P51531 1590 aa21.47■■□□□ 1.03
FARP1-214ENST00000595437 POLR3GLQ9BT43 218 aa21.46■■□□□ 1.03
FARP1-214ENST00000595437 WIZO95785 1651 aa21.46■■□□□ 1.03
FARP1-214ENST00000595437 MYT1Q01538 1121 aa21.45■■□□□ 1.02
FARP1-214ENST00000595437 CDK11AQ9UQ88 783 aaPredicted RBP21.44■■□□□ 1.02
FARP1-214ENST00000595437 FBLN2P98095 1184 aa21.42■■□□□ 1.02
FARP1-214ENST00000595437 SOGA1O94964 1423 aa21.37■■□□□ 1.01
FARP1-214ENST00000595437 ANP32CO43423 234 aa21.37■■□□□ 1.01
FARP1-214ENST00000595437 ACIN1Q9UKV3 1341 aaKnown RBP21.34■■□□□ 1.01
FARP1-214ENST00000595437 SMARCA4P51532 1647 aa21.34■■□□□ 1.01
FARP1-214ENST00000595437 ABCC8Q09428 1581 aa21.32■■□□□ 1
FARP1-214ENST00000595437 GTF3C3Q9Y5Q9 886 aa21.32■■□□□ 1
FARP1-214ENST00000595437 MTUS2Q5JR59 1369 aa21.25■□□□□ 0.99
FARP1-214ENST00000595437 TONSLQ96HA7 1378 aa21.23■□□□□ 0.99
FARP1-214ENST00000595437 ARID3CA6NKF2 412 aa21.21■□□□□ 0.99
FARP1-214ENST00000595437 ATAD2BQ9ULI0 1458 aa21.18■□□□□ 0.98
FARP1-214ENST00000595437 VPS8Q8N3P4 1428 aa21.16■□□□□ 0.98
FARP1-214ENST00000595437 CLSPNQ9HAW4 1339 aa21.15■□□□□ 0.98
FARP1-214ENST00000595437 CNGB1Q14028 1251 aaPredicted RBP21.15■□□□□ 0.98
FARP1-214ENST00000595437 ZNF777Q9ULD5 760 aaPredicted RBP21.12■□□□□ 0.97
FARP1-214ENST00000595437 ZNF326Q5BKZ1 582 aaKnown RBP21.12■□□□□ 0.97
FARP1-214ENST00000595437 CUX2O14529 1486 aa21.11■□□□□ 0.97
FARP1-214ENST00000595437 FHAD1B1AJZ9 1412 aa21.1■□□□□ 0.97
FARP1-214ENST00000595437 CARMIL1Q5VZK9 1371 aa21.1■□□□□ 0.97
FARP1-214ENST00000595437 CHMP7Q8WUX9 453 aaPredicted RBP21.03■□□□□ 0.96
FARP1-214ENST00000595437 CCNB3Q8WWL7 1395 aa20.99■□□□□ 0.95
FARP1-214ENST00000595437 CHIC2Q9UKJ5 165 aa20.98■□□□□ 0.95
FARP1-214ENST00000595437 CADPSQ9ULU8 1353 aa20.95■□□□□ 0.94
FARP1-214ENST00000595437 DDX10Q13206 875 aaKnown RBP20.95■□□□□ 0.94
FARP1-214ENST00000595437 MIER1Q8N108 512 aa20.9■□□□□ 0.94
FARP1-214ENST00000595437 TSPY4P0CV99 314 aa20.9■□□□□ 0.94
FARP1-214ENST00000595437 TSPY10P0CW01 314 aa20.9■□□□□ 0.94
FARP1-214ENST00000595437 SLC4A1APQ9BWU0 796 aaKnown RBP20.89■□□□□ 0.93
FARP1-214ENST00000595437 PDS5BQ9NTI5 1447 aa20.88■□□□□ 0.93
FARP1-214ENST00000595437 DAXXQ9UER7 740 aaPredicted RBP20.88■□□□□ 0.93
FARP1-214ENST00000595437 BCANQ96GW7 911 aa20.86■□□□□ 0.93
FARP1-214ENST00000595437 RAPGEF2Q9Y4G8 1499 aa20.85■□□□□ 0.93
FARP1-214ENST00000595437 RRP7BPQ9NSQ0 103 aa20.82■□□□□ 0.92
FARP1-214ENST00000595437 RUSC2Q8N2Y8 1516 aa20.82■□□□□ 0.92
FARP1-214ENST00000595437 PLEKHD1A6NEE1 506 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms