RNA–Protein interactions for RNA: ENST00000592497.1

CYTH1-217, Transcript of cytohesin 1, humanhuman

TSL 3

Gene CYTH1, Length 454 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH1-217ENST00000592497 NISCHQ9Y2I1 1504 aa20.53■□□□□ 0.88
CYTH1-217ENST00000592497 CCDC180Q9P1Z9 1646 aa18.23■□□□□ 0.51
CYTH1-217ENST00000592497 ABCC9O60706 1549 aa17.99■□□□□ 0.47
CYTH1-217ENST00000592497 RB1CC1Q8TDY2 1594 aa17.26■□□□□ 0.35
CYTH1-217ENST00000592497 DCAF8L2P0C7V8 631 aa17.24■□□□□ 0.35
CYTH1-217ENST00000592497 NACADO15069 1562 aa17.23■□□□□ 0.35
CYTH1-217ENST00000592497 MYO15BQ96JP2 1530 aa17.13■□□□□ 0.33
CYTH1-217ENST00000592497 ZCCHC6Q5VYS8 1495 aaKnown RBP17.05■□□□□ 0.32
CYTH1-217ENST00000592497 DCAF1Q9Y4B6 1507 aa17■□□□□ 0.31
CYTH1-217ENST00000592497 PABPN1Q86U42 306 aaKnown RBP eCLIP16.85■□□□□ 0.29
CYTH1-217ENST00000592497 UNC13AQ9UPW8 1703 aa16.73■□□□□ 0.27
CYTH1-217ENST00000592497 BICRAQ9NZM4 1560 aa16.72■□□□□ 0.27
CYTH1-217ENST00000592497 DNAJC5BQ9UF47 199 aa16.68■□□□□ 0.26
CYTH1-217ENST00000592497 SCRIBQ14160 1630 aa16.62■□□□□ 0.25
CYTH1-217ENST00000592497 SHROOM4Q9ULL8 1493 aa16.61■□□□□ 0.25
CYTH1-217ENST00000592497 EIF4G1Q04637 1599 aaKnown RBP16.3■□□□□ 0.2
CYTH1-217ENST00000592497 CC2D2AQ9P2K1 1620 aa16.25■□□□□ 0.19
CYTH1-217ENST00000592497 CECR2Q9BXF3 1484 aa16.21■□□□□ 0.19
CYTH1-217ENST00000592497 NCAPD3P42695 1498 aa15.94■□□□□ 0.14
CYTH1-217ENST00000592497 BAZ1AQ9NRL2 1556 aaPredicted RBP15.91■□□□□ 0.14
CYTH1-217ENST00000592497 ATAD2BQ9ULI0 1458 aa15.91■□□□□ 0.14
CYTH1-217ENST00000592497 SMARCA4P51532 1647 aa15.9■□□□□ 0.14
CYTH1-217ENST00000592497 SMARCA2P51531 1590 aa15.87■□□□□ 0.13
CYTH1-217ENST00000592497 MROH2BQ7Z745 1585 aa15.79■□□□□ 0.12
CYTH1-217ENST00000592497 HMGXB3Q12766 1538 aa15.79■□□□□ 0.12
CYTH1-217ENST00000592497 PEG3Q9GZU2 1588 aa15.79■□□□□ 0.12
CYTH1-217ENST00000592497 BAZ1BQ9UIG0 1483 aaKnown RBP15.75■□□□□ 0.11
CYTH1-217ENST00000592497 RSF1Q96T23 1441 aaPredicted RBP15.62■□□□□ 0.09
CYTH1-217ENST00000592497 WIZO95785 1651 aa15.57■□□□□ 0.08
CYTH1-217ENST00000592497 ERCC6Q03468 1493 aa15.53■□□□□ 0.08
CYTH1-217ENST00000592497 NESP48681 1621 aa15.53■□□□□ 0.08
CYTH1-217ENST00000592497 LAMC3Q9Y6N6 1575 aa15.49■□□□□ 0.07
CYTH1-217ENST00000592497 CADPSQ9ULU8 1353 aa15.49■□□□□ 0.07
CYTH1-217ENST00000592497 PDS5BQ9NTI5 1447 aa15.44■□□□□ 0.06
CYTH1-217ENST00000592497 TOP2AP11388 1531 aaKnown RBP15.44■□□□□ 0.06
CYTH1-217ENST00000592497 CUX2O14529 1486 aa15.43■□□□□ 0.06
CYTH1-217ENST00000592497 CFTRP13569 1480 aa15.34■□□□□ 0.05
CYTH1-217ENST00000592497 CCDC88BA6NC98 1476 aa15.29■□□□□ 0.04
CYTH1-217ENST00000592497 THOC2Q8NI27 1593 aaKnown RBP15.28■□□□□ 0.04
CYTH1-217ENST00000592497 FANCD2Q9BXW9 1451 aa15.26■□□□□ 0.03
CYTH1-217ENST00000592497 KIF21AQ7Z4S6 1674 aa15.25■□□□□ 0.03
CYTH1-217ENST00000592497 MRC2Q9UBG0 1479 aa15.25■□□□□ 0.03
CYTH1-217ENST00000592497 CEP164Q9UPV0 1460 aa15.24■□□□□ 0.03
CYTH1-217ENST00000592497 WDR62O43379 1518 aa15.18■□□□□ 0.02
CYTH1-217ENST00000592497 DNAJC5Q9H3Z4 198 aa15.15■□□□□ 0.02
CYTH1-217ENST00000592497 SUPT5HO00267 1087 aaKnown RBP15.14■□□□□ 0.01
CYTH1-217ENST00000592497 URB2Q14146 1524 aaKnown RBP15.1■□□□□ 0.01
CYTH1-217ENST00000592497 PRDM2Q13029 1718 aa15.05■□□□□ -0
CYTH1-217ENST00000592497 ABCC8Q09428 1581 aa15.03■□□□□ -0
CYTH1-217ENST00000592497 TOPBP1Q92547 1522 aa14.99□□□□□ -0.01
CYTH1-217ENST00000592497 IFT140Q96RY7 1462 aa14.95□□□□□ -0.02
CYTH1-217ENST00000592497 DNMBPQ6XZF7 1577 aa14.95□□□□□ -0.02
CYTH1-217ENST00000592497 ZNF608Q9ULD9 1512 aaPredicted RBP14.87□□□□□ -0.03
CYTH1-217ENST00000592497 POLA1P09884 1462 aaPredicted RBP14.86□□□□□ -0.03
CYTH1-217ENST00000592497 SOGA1O94964 1423 aa14.83□□□□□ -0.03
CYTH1-217ENST00000592497 OSCARQ8IYS5 282 aa14.83□□□□□ -0.04
CYTH1-217ENST00000592497 CUX1P39880 1505 aa14.82□□□□□ -0.04
CYTH1-217ENST00000592497 TARBP1Q13395 1621 aaKnown RBP14.81□□□□□ -0.04
CYTH1-217ENST00000592497 FGD5Q6ZNL6 1462 aa14.8□□□□□ -0.04
CYTH1-217ENST00000592497 RAD54L2Q9Y4B4 1467 aa14.8□□□□□ -0.04
CYTH1-217ENST00000592497 AQRO60306 1485 aaKnown RBP eCLIP14.79□□□□□ -0.043e-6■■■■□ 24.7
CYTH1-217ENST00000592497 TDRD9Q8NDG6 1382 aaKnown RBP14.75□□□□□ -0.05
CYTH1-217ENST00000592497 EIF4G3O43432 1585 aaKnown RBP14.75□□□□□ -0.05
CYTH1-217ENST00000592497 WRNQ14191 1432 aaPredicted RBP eCLIP14.72□□□□□ -0.052e-6■■■■■ 64.8
CYTH1-217ENST00000592497 WDR97A6NE52 1622 aa14.71□□□□□ -0.05
CYTH1-217ENST00000592497 ABCA10Q8WWZ4 1543 aa14.67□□□□□ -0.06
CYTH1-217ENST00000592497 GRIN2BQ13224 1484 aa14.66□□□□□ -0.06
CYTH1-217ENST00000592497 FBLN2P98095 1184 aa14.66□□□□□ -0.06
CYTH1-217ENST00000592497 TOP2BQ02880 1626 aa14.66□□□□□ -0.06
CYTH1-217ENST00000592497 GAPVD1Q14C86 1478 aa14.64□□□□□ -0.07
CYTH1-217ENST00000592497 CHMP7Q8WUX9 453 aaPredicted RBP14.63□□□□□ -0.07
CYTH1-217ENST00000592497 SNAPC4Q5SXM2 1469 aa14.63□□□□□ -0.07
CYTH1-217ENST00000592497 MAGI1Q96QZ7 1491 aaPredicted RBP14.63□□□□□ -0.07
CYTH1-217ENST00000592497 BIVM-ERCC5R4GMW8 1640 aa14.63□□□□□ -0.07
CYTH1-217ENST00000592497 SYNJ1O43426 1573 aa14.62□□□□□ -0.07
CYTH1-217ENST00000592497 SYNJ2O15056 1496 aa14.57□□□□□ -0.08
CYTH1-217ENST00000592497 ABCA5Q8WWZ7 1642 aa14.56□□□□□ -0.08
CYTH1-217ENST00000592497 TRIM41Q8WV44 630 aa14.55□□□□□ -0.08
CYTH1-217ENST00000592497 CHD1O14646 1710 aa14.53□□□□□ -0.08
CYTH1-217ENST00000592497 ARHGEF11O15085 1522 aa14.5□□□□□ -0.09
CYTH1-217ENST00000592497 PBRM1Q86U86 1689 aa14.49□□□□□ -0.09
CYTH1-217ENST00000592497 ERICH3Q5RHP9 1530 aa14.49□□□□□ -0.09
CYTH1-217ENST00000592497 FHAD1B1AJZ9 1412 aa14.49□□□□□ -0.09
CYTH1-217ENST00000592497 RIMBP3CA6NJZ7 1639 aa14.48□□□□□ -0.09
CYTH1-217ENST00000592497 RIMBP3BA6NNM3 1639 aa14.48□□□□□ -0.09
CYTH1-217ENST00000592497 RIMBP3Q9UFD9 1639 aa14.48□□□□□ -0.09
CYTH1-217ENST00000592497 CLASP1Q7Z460 1538 aa14.46□□□□□ -0.09
CYTH1-217ENST00000592497 GRIN2AQ12879 1464 aa14.44□□□□□ -0.1
CYTH1-217ENST00000592497 KIF27Q86VH2 1401 aa14.44□□□□□ -0.1
CYTH1-217ENST00000592497 CYB5RLQ6IPT4 315 aa14.44□□□□□ -0.1
CYTH1-217ENST00000592497 ADAMTS12P58397 1594 aa14.43□□□□□ -0.1
CYTH1-217ENST00000592497 IGF1RP08069 1367 aa14.42□□□□□ -0.1
CYTH1-217ENST00000592497 NUP160Q12769 1436 aa14.41□□□□□ -0.1
CYTH1-217ENST00000592497 ARAP1Q96P48 1450 aa14.38□□□□□ -0.11
CYTH1-217ENST00000592497 CEP170Q5SW79 1584 aa14.34□□□□□ -0.11
CYTH1-217ENST00000592497 JPH4Q96JJ6 628 aa14.32□□□□□ -0.12
CYTH1-217ENST00000592497 CARMIL1Q5VZK9 1371 aa14.32□□□□□ -0.12
CYTH1-217ENST00000592497 CUL7Q14999 1698 aa14.29□□□□□ -0.12
CYTH1-217ENST00000592497 KIAA0586Q9BVV6 1533 aa14.26□□□□□ -0.13
CYTH1-217ENST00000592497 SHROOM2Q13796 1616 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms