RNA–Protein interactions for RNA: ENST00000446868.7

CYTH1-202, Transcript of cytohesin 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CYTH1, Length 3,311 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH1-202ENST00000446868 NISCHQ9Y2I1 1504 aa33.8■■■■□ 3
CYTH1-202ENST00000446868 CCDC180Q9P1Z9 1646 aa29.34■■■□□ 2.29
CYTH1-202ENST00000446868 DCAF8L2P0C7V8 631 aa28.69■■■□□ 2.18
CYTH1-202ENST00000446868 ABCC9O60706 1549 aa28.58■■■□□ 2.17
CYTH1-202ENST00000446868 ZCCHC6Q5VYS8 1495 aaKnown RBP28.28■■■□□ 2.12
CYTH1-202ENST00000446868 SHROOM4Q9ULL8 1493 aa27.97■■■□□ 2.07
CYTH1-202ENST00000446868 DCAF1Q9Y4B6 1507 aa27.65■■■□□ 2.02
CYTH1-202ENST00000446868 NACADO15069 1562 aa27.49■■□□□ 1.99
CYTH1-202ENST00000446868 RB1CC1Q8TDY2 1594 aa27.4■■□□□ 1.98
CYTH1-202ENST00000446868 SCRIBQ14160 1630 aa27.39■■□□□ 1.98
CYTH1-202ENST00000446868 MYO15BQ96JP2 1530 aa27.37■■□□□ 1.97
CYTH1-202ENST00000446868 PABPN1Q86U42 306 aaKnown RBP eCLIP27.07■■□□□ 1.92
CYTH1-202ENST00000446868 UNC13AQ9UPW8 1703 aa26.9■■□□□ 1.9
CYTH1-202ENST00000446868 SUPT5HO00267 1087 aaKnown RBP26.76■■□□□ 1.87
CYTH1-202ENST00000446868 BICRAQ9NZM4 1560 aa26.65■■□□□ 1.86
CYTH1-202ENST00000446868 CECR2Q9BXF3 1484 aa26.51■■□□□ 1.83
CYTH1-202ENST00000446868 MROH2BQ7Z745 1585 aa26.24■■□□□ 1.79
CYTH1-202ENST00000446868 RSF1Q96T23 1441 aaPredicted RBP26.22■■□□□ 1.79
CYTH1-202ENST00000446868 BAZ1AQ9NRL2 1556 aaPredicted RBP26.07■■□□□ 1.76
CYTH1-202ENST00000446868 SMARCA4P51532 1647 aa26.03■■□□□ 1.76
CYTH1-202ENST00000446868 WIZO95785 1651 aa26.02■■□□□ 1.76
CYTH1-202ENST00000446868 EIF4G1Q04637 1599 aaKnown RBP25.91■■□□□ 1.74
CYTH1-202ENST00000446868 ATAD2BQ9ULI0 1458 aa25.73■■□□□ 1.71
CYTH1-202ENST00000446868 CC2D2AQ9P2K1 1620 aa25.65■■□□□ 1.7
CYTH1-202ENST00000446868 BAZ1BQ9UIG0 1483 aaKnown RBP25.61■■□□□ 1.69
CYTH1-202ENST00000446868 DNAJC5BQ9UF47 199 aa25.6■■□□□ 1.69
CYTH1-202ENST00000446868 SMARCA2P51531 1590 aa25.58■■□□□ 1.69
CYTH1-202ENST00000446868 TOP2AP11388 1531 aaKnown RBP25.55■■□□□ 1.68
CYTH1-202ENST00000446868 PEG3Q9GZU2 1588 aa25.53■■□□□ 1.68
CYTH1-202ENST00000446868 CCDC88BA6NC98 1476 aa25.45■■□□□ 1.67
CYTH1-202ENST00000446868 NCAPD3P42695 1498 aa25.45■■□□□ 1.67
CYTH1-202ENST00000446868 HMGXB3Q12766 1538 aa25.31■■□□□ 1.64
CYTH1-202ENST00000446868 CHIC1Q5VXU3 224 aa25.22■■□□□ 1.63
CYTH1-202ENST00000446868 NESP48681 1621 aa24.99■■□□□ 1.59
CYTH1-202ENST00000446868 TRIM41Q8WV44 630 aa24.99■■□□□ 1.59
CYTH1-202ENST00000446868 ABCC8Q09428 1581 aa24.97■■□□□ 1.59
CYTH1-202ENST00000446868 CADPSQ9ULU8 1353 aa24.91■■□□□ 1.58
CYTH1-202ENST00000446868 CFTRP13569 1480 aa24.86■■□□□ 1.57
CYTH1-202ENST00000446868 FAM9AQ8IZU1 332 aaPredicted RBP24.82■■□□□ 1.56
CYTH1-202ENST00000446868 EHMT2Q96KQ7 1210 aa24.73■■□□□ 1.55
CYTH1-202ENST00000446868 WRNQ14191 1432 aaPredicted RBP eCLIP24.7■■□□□ 1.542e-6■■■■■ 64.8
CYTH1-202ENST00000446868 FANCD2Q9BXW9 1451 aa24.67■■□□□ 1.54
CYTH1-202ENST00000446868 SYNJ1O43426 1573 aa24.61■■□□□ 1.53
CYTH1-202ENST00000446868 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
CYTH1-202ENST00000446868 PDS5BQ9NTI5 1447 aa24.53■■□□□ 1.52
CYTH1-202ENST00000446868 CUX1P39880 1505 aa24.51■■□□□ 1.51
CYTH1-202ENST00000446868 PRDM2Q13029 1718 aa24.51■■□□□ 1.51
CYTH1-202ENST00000446868 CEP164Q9UPV0 1460 aa24.5■■□□□ 1.51
CYTH1-202ENST00000446868 LOC105371045A0A1W2PR82 267 aa24.5■■□□□ 1.51
CYTH1-202ENST00000446868 KIF21AQ7Z4S6 1674 aa24.5■■□□□ 1.51
CYTH1-202ENST00000446868 ERCC6Q03468 1493 aa24.46■■□□□ 1.51
CYTH1-202ENST00000446868 SOGA1O94964 1423 aa24.46■■□□□ 1.51
CYTH1-202ENST00000446868 RUSC2Q8N2Y8 1516 aa24.42■■□□□ 1.5
CYTH1-202ENST00000446868 TOP2BQ02880 1626 aa24.38■■□□□ 1.49
CYTH1-202ENST00000446868 URB2Q14146 1524 aaKnown RBP24.38■■□□□ 1.49
CYTH1-202ENST00000446868 TOPBP1Q92547 1522 aa24.33■■□□□ 1.49
CYTH1-202ENST00000446868 FGD5Q6ZNL6 1462 aa24.33■■□□□ 1.48
CYTH1-202ENST00000446868 RAD54L2Q9Y4B4 1467 aa24.3■■□□□ 1.48
CYTH1-202ENST00000446868 BIVM-ERCC5R4GMW8 1640 aa24.29■■□□□ 1.48
CYTH1-202ENST00000446868 DNMBPQ6XZF7 1577 aa24.25■■□□□ 1.47
CYTH1-202ENST00000446868 POLA1P09884 1462 aaPredicted RBP24.23■■□□□ 1.47
CYTH1-202ENST00000446868 MRC2Q9UBG0 1479 aa24.23■■□□□ 1.47
CYTH1-202ENST00000446868 CSRNP3Q8WYN3 585 aa24.18■■□□□ 1.46
CYTH1-202ENST00000446868 CUX2O14529 1486 aa24.17■■□□□ 1.46
CYTH1-202ENST00000446868 TDRD9Q8NDG6 1382 aaKnown RBP24.15■■□□□ 1.46
CYTH1-202ENST00000446868 RANGAP1P46060 587 aaPredicted RBP24.07■■□□□ 1.44
CYTH1-202ENST00000446868 KIF27Q86VH2 1401 aa24.06■■□□□ 1.44
CYTH1-202ENST00000446868 THOC2Q8NI27 1593 aaKnown RBP24.06■■□□□ 1.44
CYTH1-202ENST00000446868 UBTFP17480 764 aaKnown RBP24.05■■□□□ 1.44
CYTH1-202ENST00000446868 WDR62O43379 1518 aa24.03■■□□□ 1.44
CYTH1-202ENST00000446868 AQRO60306 1485 aaKnown RBP eCLIP24■■□□□ 1.439e-7■■■■■ 31.4
CYTH1-202ENST00000446868 ZNF608Q9ULD9 1512 aaPredicted RBP23.98■■□□□ 1.43
CYTH1-202ENST00000446868 EEA1Q15075 1411 aa23.96■■□□□ 1.43
CYTH1-202ENST00000446868 ABCA10Q8WWZ4 1543 aa23.95■■□□□ 1.42
CYTH1-202ENST00000446868 IGF1RP08069 1367 aa23.93■■□□□ 1.42
CYTH1-202ENST00000446868 TARBP1Q13395 1621 aaKnown RBP23.91■■□□□ 1.42
CYTH1-202ENST00000446868 RAPGEF2Q9Y4G8 1499 aa23.91■■□□□ 1.42
CYTH1-202ENST00000446868 GAPVD1Q14C86 1478 aa23.88■■□□□ 1.41
CYTH1-202ENST00000446868 IFT140Q96RY7 1462 aa23.85■■□□□ 1.41
CYTH1-202ENST00000446868 CARMIL1Q5VZK9 1371 aa23.83■■□□□ 1.41
CYTH1-202ENST00000446868 WDR97A6NE52 1622 aa23.81■■□□□ 1.4
CYTH1-202ENST00000446868 FBLN2P98095 1184 aa23.81■■□□□ 1.4
CYTH1-202ENST00000446868 GOLGA3Q08378 1498 aa23.79■■□□□ 1.4
CYTH1-202ENST00000446868 PRXQ9BXM0 1461 aa23.77■■□□□ 1.4
CYTH1-202ENST00000446868 ABCA5Q8WWZ7 1642 aa23.75■■□□□ 1.39
CYTH1-202ENST00000446868 EIF4G3O43432 1585 aaKnown RBP23.72■■□□□ 1.39
CYTH1-202ENST00000446868 KIF21BO75037 1637 aa23.7■■□□□ 1.38
CYTH1-202ENST00000446868 GRIN2BQ13224 1484 aa23.66■■□□□ 1.38
CYTH1-202ENST00000446868 SNAPC4Q5SXM2 1469 aa23.66■■□□□ 1.38
CYTH1-202ENST00000446868 TNIKQ9UKE5 1360 aa23.65■■□□□ 1.38
CYTH1-202ENST00000446868 PBRM1Q86U86 1689 aa23.65■■□□□ 1.38
CYTH1-202ENST00000446868 CEP162Q5TB80 1403 aa23.63■■□□□ 1.37
CYTH1-202ENST00000446868 ERICH3Q5RHP9 1530 aa23.62■■□□□ 1.37
CYTH1-202ENST00000446868 CHMP7Q8WUX9 453 aaPredicted RBP23.62■■□□□ 1.37
CYTH1-202ENST00000446868 P3H3Q8IVL6 736 aa23.61■■□□□ 1.37
CYTH1-202ENST00000446868 PPARGC1BQ86YN6 1023 aaKnown RBP23.59■■□□□ 1.37
CYTH1-202ENST00000446868 CUL7Q14999 1698 aa23.54■■□□□ 1.36
CYTH1-202ENST00000446868 FHAD1B1AJZ9 1412 aa23.53■■□□□ 1.36
CYTH1-202ENST00000446868 TTBK1Q5TCY1 1321 aaPredicted RBP23.53■■□□□ 1.36
CYTH1-202ENST00000446868 CLIP1P30622 1438 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms