RNA–Protein interactions for RNA: ENST00000361731.3

SFT2D1-201, Transcript of SFT2 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFT2D1, Length 1,079 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D1-201ENST00000361731 NISCHQ9Y2I1 1504 aa41.24■■■■■ 4.19
SFT2D1-201ENST00000361731 ABCC9O60706 1549 aa37.61■■■■□ 3.61
SFT2D1-201ENST00000361731 CCDC180Q9P1Z9 1646 aa37.25■■■■□ 3.55
SFT2D1-201ENST00000361731 DNAJC5BQ9UF47 199 aa35.85■■■■□ 3.33
SFT2D1-201ENST00000361731 RB1CC1Q8TDY2 1594 aa35.63■■■■□ 3.29
SFT2D1-201ENST00000361731 NACADO15069 1562 aa35.3■■■■□ 3.24
SFT2D1-201ENST00000361731 UNC13AQ9UPW8 1703 aa34.91■■■■□ 3.18
SFT2D1-201ENST00000361731 PABPN1Q86U42 306 aaKnown RBP eCLIP34.88■■■■□ 3.17
SFT2D1-201ENST00000361731 MYO15BQ96JP2 1530 aa34.76■■■■□ 3.16
SFT2D1-201ENST00000361731 BICRAQ9NZM4 1560 aa34.75■■■■□ 3.15
SFT2D1-201ENST00000361731 DCAF8L2P0C7V8 631 aa34.66■■■■□ 3.14
SFT2D1-201ENST00000361731 SHROOM4Q9ULL8 1493 aa34.2■■■■□ 3.07
SFT2D1-201ENST00000361731 DCAF1Q9Y4B6 1507 aa34.11■■■■□ 3.05
SFT2D1-201ENST00000361731 AEBP2Q6ZN18 517 aaPredicted RBP34.11■■■■□ 3.05
SFT2D1-201ENST00000361731 ZCCHC6Q5VYS8 1495 aaKnown RBP34.1■■■■□ 3.05
SFT2D1-201ENST00000361731 CC2D2AQ9P2K1 1620 aa34.03■■■■□ 3.04
SFT2D1-201ENST00000361731 CECR2Q9BXF3 1484 aa33.97■■■■□ 3.03
SFT2D1-201ENST00000361731 EIF4G1Q04637 1599 aaKnown RBP33.85■■■■□ 3.01
SFT2D1-201ENST00000361731 SCRIBQ14160 1630 aa33.8■■■■□ 3
SFT2D1-201ENST00000361731 DNAJC5Q9H3Z4 198 aa33.24■■■□□ 2.91
SFT2D1-201ENST00000361731 CUX2O14529 1486 aa32.71■■■□□ 2.83
SFT2D1-201ENST00000361731 NCAPD3P42695 1498 aa32.63■■■□□ 2.81
SFT2D1-201ENST00000361731 ATAD2BQ9ULI0 1458 aa32.44■■■□□ 2.78
SFT2D1-201ENST00000361731 ERCC6Q03468 1493 aa32.43■■■□□ 2.78
SFT2D1-201ENST00000361731 HMGXB3Q12766 1538 aa32.35■■■□□ 2.77
SFT2D1-201ENST00000361731 SMARCA4P51532 1647 aa32.27■■■□□ 2.76
SFT2D1-201ENST00000361731 SMARCA2P51531 1590 aa32.27■■■□□ 2.76
SFT2D1-201ENST00000361731 NESP48681 1621 aa32.23■■■□□ 2.75
SFT2D1-201ENST00000361731 THOC2Q8NI27 1593 aaKnown RBP32.09■■■□□ 2.73
SFT2D1-201ENST00000361731 PEG3Q9GZU2 1588 aa32.06■■■□□ 2.72
SFT2D1-201ENST00000361731 CHIC1Q5VXU3 224 aa32.02■■■□□ 2.72
SFT2D1-201ENST00000361731 BAZ1BQ9UIG0 1483 aaKnown RBP32.01■■■□□ 2.71
SFT2D1-201ENST00000361731 BAZ1AQ9NRL2 1556 aaPredicted RBP32■■■□□ 2.71
SFT2D1-201ENST00000361731 LAMC3Q9Y6N6 1575 aa31.94■■■□□ 2.7
SFT2D1-201ENST00000361731 KIF21AQ7Z4S6 1674 aa31.8■■■□□ 2.68
SFT2D1-201ENST00000361731 MROH2BQ7Z745 1585 aa31.77■■■□□ 2.68
SFT2D1-201ENST00000361731 PDS5BQ9NTI5 1447 aa31.69■■■□□ 2.66
SFT2D1-201ENST00000361731 CADPSQ9ULU8 1353 aa31.55■■■□□ 2.64
SFT2D1-201ENST00000361731 WDR62O43379 1518 aa31.51■■■□□ 2.63
SFT2D1-201ENST00000361731 MRC2Q9UBG0 1479 aa31.5■■■□□ 2.63
SFT2D1-201ENST00000361731 TRIM41Q8WV44 630 aa31.36■■■□□ 2.61
SFT2D1-201ENST00000361731 WIZO95785 1651 aa31.32■■■□□ 2.6
SFT2D1-201ENST00000361731 CEP164Q9UPV0 1460 aa31.23■■■□□ 2.59
SFT2D1-201ENST00000361731 FANCD2Q9BXW9 1451 aa31.18■■■□□ 2.58
SFT2D1-201ENST00000361731 CFTRP13569 1480 aa31.14■■■□□ 2.58
SFT2D1-201ENST00000361731 URB2Q14146 1524 aaKnown RBP31.02■■■□□ 2.56
SFT2D1-201ENST00000361731 OSCARQ8IYS5 282 aa30.99■■■□□ 2.55
SFT2D1-201ENST00000361731 TOP2AP11388 1531 aaKnown RBP30.92■■■□□ 2.54
SFT2D1-201ENST00000361731 RSF1Q96T23 1441 aaPredicted RBP30.91■■■□□ 2.54
SFT2D1-201ENST00000361731 RIMBP3CA6NJZ7 1639 aa30.77■■■□□ 2.52
SFT2D1-201ENST00000361731 RIMBP3BA6NNM3 1639 aa30.77■■■□□ 2.52
SFT2D1-201ENST00000361731 RIMBP3Q9UFD9 1639 aa30.77■■■□□ 2.52
SFT2D1-201ENST00000361731 PRDM2Q13029 1718 aa30.77■■■□□ 2.52
SFT2D1-201ENST00000361731 ZNF608Q9ULD9 1512 aaPredicted RBP30.7■■■□□ 2.51
SFT2D1-201ENST00000361731 IFT140Q96RY7 1462 aa30.66■■■□□ 2.5
SFT2D1-201ENST00000361731 ARHGEF11O15085 1522 aa30.62■■■□□ 2.49
SFT2D1-201ENST00000361731 TOPBP1Q92547 1522 aa30.57■■■□□ 2.48
SFT2D1-201ENST00000361731 CCDC88BA6NC98 1476 aa30.56■■■□□ 2.48
SFT2D1-201ENST00000361731 EIF4G3O43432 1585 aaKnown RBP30.49■■■□□ 2.47
SFT2D1-201ENST00000361731 ABCC8Q09428 1581 aa30.41■■■□□ 2.46
SFT2D1-201ENST00000361731 DNMBPQ6XZF7 1577 aa30.41■■■□□ 2.46
SFT2D1-201ENST00000361731 TARBP1Q13395 1621 aaKnown RBP30.4■■■□□ 2.46
SFT2D1-201ENST00000361731 CHD1O14646 1710 aa30.34■■■□□ 2.45
SFT2D1-201ENST00000361731 ARAP1Q96P48 1450 aa30.31■■■□□ 2.44
SFT2D1-201ENST00000361731 AQRO60306 1485 aaKnown RBP eCLIP30.3■■■□□ 2.441e-13■■■■■ 33.4
SFT2D1-201ENST00000361731 CYB5RLQ6IPT4 315 aa30.26■■■□□ 2.43
SFT2D1-201ENST00000361731 POLA1P09884 1462 aaPredicted RBP30.23■■■□□ 2.43
SFT2D1-201ENST00000361731 RAD54L2Q9Y4B4 1467 aa30.08■■■□□ 2.41
SFT2D1-201ENST00000361731 CLASP1Q7Z460 1538 aa30.07■■■□□ 2.4
SFT2D1-201ENST00000361731 WDR97A6NE52 1622 aa30.04■■■□□ 2.4
SFT2D1-201ENST00000361731 TDRD9Q8NDG6 1382 aaKnown RBP30■■■□□ 2.39
SFT2D1-201ENST00000361731 SOGA1O94964 1423 aa29.99■■■□□ 2.39
SFT2D1-201ENST00000361731 FBLN2P98095 1184 aa29.99■■■□□ 2.39
SFT2D1-201ENST00000361731 SNAPC4Q5SXM2 1469 aa29.99■■■□□ 2.39
SFT2D1-201ENST00000361731 TRHP20396 242 aaPredicted RBP29.98■■■□□ 2.39
SFT2D1-201ENST00000361731 FGD5Q6ZNL6 1462 aa29.93■■■□□ 2.38
SFT2D1-201ENST00000361731 MAGI1Q96QZ7 1491 aaPredicted RBP29.92■■■□□ 2.38
SFT2D1-201ENST00000361731 CUX1P39880 1505 aa29.88■■■□□ 2.37
SFT2D1-201ENST00000361731 SYNJ1O43426 1573 aa29.88■■■□□ 2.37
SFT2D1-201ENST00000361731 GRIN2BQ13224 1484 aa29.83■■■□□ 2.37
SFT2D1-201ENST00000361731 SYNJ2O15056 1496 aa29.81■■■□□ 2.36
SFT2D1-201ENST00000361731 CHMP7Q8WUX9 453 aaPredicted RBP29.76■■■□□ 2.35
SFT2D1-201ENST00000361731 PBRM1Q86U86 1689 aa29.69■■■□□ 2.34
SFT2D1-201ENST00000361731 GAPVD1Q14C86 1478 aa29.67■■■□□ 2.34
SFT2D1-201ENST00000361731 ABCA5Q8WWZ7 1642 aa29.64■■■□□ 2.34
SFT2D1-201ENST00000361731 ABCA10Q8WWZ4 1543 aa29.61■■■□□ 2.33
SFT2D1-201ENST00000361731 ERCC6L2Q5T890 1561 aa29.54■■■□□ 2.32
SFT2D1-201ENST00000361731 GRIN2AQ12879 1464 aa29.47■■■□□ 2.31
SFT2D1-201ENST00000361731 NUP160Q12769 1436 aa29.45■■■□□ 2.31
SFT2D1-201ENST00000361731 ADAMTS12P58397 1594 aa29.43■■■□□ 2.3
SFT2D1-201ENST00000361731 CEP170Q5SW79 1584 aa29.43■■■□□ 2.3
SFT2D1-201ENST00000361731 SHROOM2Q13796 1616 aa29.42■■■□□ 2.3
SFT2D1-201ENST00000361731 SENP3Q9H4L4 574 aaPredicted RBP29.37■■■□□ 2.29
SFT2D1-201ENST00000361731 WRNQ14191 1432 aaPredicted RBP eCLIP29.29■■■□□ 2.28
SFT2D1-201ENST00000361731 BIVM-ERCC5R4GMW8 1640 aa29.27■■■□□ 2.28
SFT2D1-201ENST00000361731 FHAD1B1AJZ9 1412 aa29.27■■■□□ 2.28
SFT2D1-201ENST00000361731 KIF13AQ9H1H9 1805 aa29.25■■■□□ 2.27
SFT2D1-201ENST00000361731 TOP2BQ02880 1626 aa29.25■■■□□ 2.27
SFT2D1-201ENST00000361731 ERICH3Q5RHP9 1530 aa29.21■■■□□ 2.27
SFT2D1-201ENST00000361731 PRG4Q92954 1404 aaPredicted RBP29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms