RNA–Protein interactions for RNA: ENST00000413658.6

ZNF3-205, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene ZNF3, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-205ENST00000413658 NISCHQ9Y2I1 1504 aa24.66■■□□□ 1.54
ZNF3-205ENST00000413658 AEBP2Q6ZN18 517 aaPredicted RBP23.07■■□□□ 1.28
ZNF3-205ENST00000413658 CHIC1Q5VXU3 224 aa22.67■■□□□ 1.22
ZNF3-205ENST00000413658 CCDC180Q9P1Z9 1646 aa21.84■■□□□ 1.09
ZNF3-205ENST00000413658 ABCC9O60706 1549 aa21.05■□□□□ 0.96
ZNF3-205ENST00000413658 ZCCHC6Q5VYS8 1495 aaKnown RBP20.61■□□□□ 0.89
ZNF3-205ENST00000413658 DCAF1Q9Y4B6 1507 aa20.44■□□□□ 0.86
ZNF3-205ENST00000413658 NACADO15069 1562 aa20.43■□□□□ 0.86
ZNF3-205ENST00000413658 MYO15BQ96JP2 1530 aa20.41■□□□□ 0.86
ZNF3-205ENST00000413658 RB1CC1Q8TDY2 1594 aa20.37■□□□□ 0.85
ZNF3-205ENST00000413658 DCAF8L2P0C7V8 631 aa20.37■□□□□ 0.85
ZNF3-205ENST00000413658 UNC13AQ9UPW8 1703 aa20.04■□□□□ 0.8
ZNF3-205ENST00000413658 SCRIBQ14160 1630 aa19.92■□□□□ 0.78
ZNF3-205ENST00000413658 PHF23Q9BUL5 403 aaPredicted RBP19.86■□□□□ 0.77
ZNF3-205ENST00000413658 BICRAQ9NZM4 1560 aa19.82■□□□□ 0.76
ZNF3-205ENST00000413658 SENP3Q9H4L4 574 aaPredicted RBP19.7■□□□□ 0.74
ZNF3-205ENST00000413658 PABPN1Q86U42 306 aaKnown RBP eCLIP19.69■□□□□ 0.74
ZNF3-205ENST00000413658 SHROOM4Q9ULL8 1493 aa19.58■□□□□ 0.72
ZNF3-205ENST00000413658 EIF4G1Q04637 1599 aaKnown RBP19.23■□□□□ 0.67
ZNF3-205ENST00000413658 CECR2Q9BXF3 1484 aa19.19■□□□□ 0.66
ZNF3-205ENST00000413658 DNAJC5BQ9UF47 199 aa19.11■□□□□ 0.65
ZNF3-205ENST00000413658 SMARCA4P51532 1647 aa19.1■□□□□ 0.65
ZNF3-205ENST00000413658 CC2D2AQ9P2K1 1620 aa19.1■□□□□ 0.65
ZNF3-205ENST00000413658 BAZ1AQ9NRL2 1556 aaPredicted RBP19.08■□□□□ 0.64
ZNF3-205ENST00000413658 MROH2BQ7Z745 1585 aa19.03■□□□□ 0.64
ZNF3-205ENST00000413658 PEG3Q9GZU2 1588 aa18.93■□□□□ 0.62
ZNF3-205ENST00000413658 ATAD2BQ9ULI0 1458 aa18.9■□□□□ 0.62
ZNF3-205ENST00000413658 RSF1Q96T23 1441 aaPredicted RBP18.89■□□□□ 0.61
ZNF3-205ENST00000413658 SMARCA2P51531 1590 aa18.88■□□□□ 0.61
ZNF3-205ENST00000413658 NCAPD3P42695 1498 aa18.85■□□□□ 0.61
ZNF3-205ENST00000413658 WIZO95785 1651 aa18.85■□□□□ 0.61
ZNF3-205ENST00000413658 HMGXB3Q12766 1538 aa18.8■□□□□ 0.6
ZNF3-205ENST00000413658 BAZ1BQ9UIG0 1483 aaKnown RBP18.73■□□□□ 0.59
ZNF3-205ENST00000413658 TOP2AP11388 1531 aaKnown RBP18.64■□□□□ 0.57
ZNF3-205ENST00000413658 SUPT5HO00267 1087 aaKnown RBP18.53■□□□□ 0.56
ZNF3-205ENST00000413658 PLPPR3Q6T4P5 718 aa18.49■□□□□ 0.55
ZNF3-205ENST00000413658 CCDC88BA6NC98 1476 aa18.42■□□□□ 0.54
ZNF3-205ENST00000413658 NESP48681 1621 aa18.33■□□□□ 0.52
ZNF3-205ENST00000413658 LAMC3Q9Y6N6 1575 aa18.31■□□□□ 0.52
ZNF3-205ENST00000413658 CADPSQ9ULU8 1353 aa18.29■□□□□ 0.52
ZNF3-205ENST00000413658 CFTRP13569 1480 aa18.27■□□□□ 0.51
ZNF3-205ENST00000413658 PRDM2Q13029 1718 aa18.23■□□□□ 0.51
ZNF3-205ENST00000413658 FOXD1Q16676 465 aa18.18■□□□□ 0.5
ZNF3-205ENST00000413658 KIF21AQ7Z4S6 1674 aa18.16■□□□□ 0.5
ZNF3-205ENST00000413658 PDS5BQ9NTI5 1447 aa18.13■□□□□ 0.49
ZNF3-205ENST00000413658 FANCD2Q9BXW9 1451 aa18.09■□□□□ 0.49
ZNF3-205ENST00000413658 ERCC6Q03468 1493 aa18.08■□□□□ 0.49
ZNF3-205ENST00000413658 CEP164Q9UPV0 1460 aa18.03■□□□□ 0.48
ZNF3-205ENST00000413658 THOC2Q8NI27 1593 aaKnown RBP18.02■□□□□ 0.48
ZNF3-205ENST00000413658 MRC2Q9UBG0 1479 aa17.96■□□□□ 0.47
ZNF3-205ENST00000413658 URB2Q14146 1524 aaKnown RBP17.93■□□□□ 0.46
ZNF3-205ENST00000413658 WDR62O43379 1518 aa17.92■□□□□ 0.46
ZNF3-205ENST00000413658 DNMBPQ6XZF7 1577 aa17.85■□□□□ 0.45
ZNF3-205ENST00000413658 TOPBP1Q92547 1522 aa17.85■□□□□ 0.45
ZNF3-205ENST00000413658 CUX2O14529 1486 aa17.84■□□□□ 0.45
ZNF3-205ENST00000413658 CUX1P39880 1505 aa17.83■□□□□ 0.45
ZNF3-205ENST00000413658 ABCC8Q09428 1581 aa17.83■□□□□ 0.45
ZNF3-205ENST00000413658 BIVM-ERCC5R4GMW8 1640 aa17.77■□□□□ 0.43
ZNF3-205ENST00000413658 SYNJ1O43426 1573 aa17.77■□□□□ 0.43
ZNF3-205ENST00000413658 WRNQ14191 1432 aaPredicted RBP eCLIP17.76■□□□□ 0.43
ZNF3-205ENST00000413658 TOP2BQ02880 1626 aa17.75■□□□□ 0.43
ZNF3-205ENST00000413658 POLA1P09884 1462 aaPredicted RBP17.71■□□□□ 0.43
ZNF3-205ENST00000413658 FGD5Q6ZNL6 1462 aa17.7■□□□□ 0.42
ZNF3-205ENST00000413658 TARBP1Q13395 1621 aaKnown RBP17.68■□□□□ 0.42
ZNF3-205ENST00000413658 IFT140Q96RY7 1462 aa17.64■□□□□ 0.41
ZNF3-205ENST00000413658 RAD54L2Q9Y4B4 1467 aa17.63■□□□□ 0.41
ZNF3-205ENST00000413658 WDR97A6NE52 1622 aa17.62■□□□□ 0.41
ZNF3-205ENST00000413658 SOGA1O94964 1423 aa17.61■□□□□ 0.41
ZNF3-205ENST00000413658 ZNF608Q9ULD9 1512 aaPredicted RBP17.57■□□□□ 0.4
ZNF3-205ENST00000413658 ABCA10Q8WWZ4 1543 aa17.55■□□□□ 0.4
ZNF3-205ENST00000413658 EIF4G3O43432 1585 aaKnown RBP17.53■□□□□ 0.4
ZNF3-205ENST00000413658 ADRA2BP18089 450 aa17.52■□□□□ 0.4
ZNF3-205ENST00000413658 ABCA5Q8WWZ7 1642 aa17.49■□□□□ 0.39
ZNF3-205ENST00000413658 PPP6R1Q9UPN7 881 aa17.49■□□□□ 0.39
ZNF3-205ENST00000413658 AQRO60306 1485 aaKnown RBP eCLIP17.49■□□□□ 0.392e-7■■■■■ 35.8
ZNF3-205ENST00000413658 TDRD9Q8NDG6 1382 aaKnown RBP17.48■□□□□ 0.39
ZNF3-205ENST00000413658 TRIM41Q8WV44 630 aa17.47■□□□□ 0.39
ZNF3-205ENST00000413658 PBRM1Q86U86 1689 aa17.44■□□□□ 0.38
ZNF3-205ENST00000413658 GAPVD1Q14C86 1478 aa17.43■□□□□ 0.38
ZNF3-205ENST00000413658 GRIN2BQ13224 1484 aa17.38■□□□□ 0.37
ZNF3-205ENST00000413658 KIF27Q86VH2 1401 aa17.36■□□□□ 0.37
ZNF3-205ENST00000413658 ERICH3Q5RHP9 1530 aa17.35■□□□□ 0.37
ZNF3-205ENST00000413658 RUSC2Q8N2Y8 1516 aa17.34■□□□□ 0.37
ZNF3-205ENST00000413658 SNAPC4Q5SXM2 1469 aa17.33■□□□□ 0.37
ZNF3-205ENST00000413658 MAGI1Q96QZ7 1491 aaPredicted RBP17.32■□□□□ 0.36
ZNF3-205ENST00000413658 IGF1RP08069 1367 aa17.29■□□□□ 0.36
ZNF3-205ENST00000413658 ADAMTS12P58397 1594 aa17.28■□□□□ 0.36
ZNF3-205ENST00000413658 CHD1O14646 1710 aa17.28■□□□□ 0.36
ZNF3-205ENST00000413658 CUL7Q14999 1698 aa17.25■□□□□ 0.35
ZNF3-205ENST00000413658 SYNJ2O15056 1496 aa17.25■□□□□ 0.35
ZNF3-205ENST00000413658 PIAS4Q8N2W9 510 aaPredicted RBP17.23■□□□□ 0.35
ZNF3-205ENST00000413658 FHAD1B1AJZ9 1412 aa17.23■□□□□ 0.35
ZNF3-205ENST00000413658 EEA1Q15075 1411 aa17.2■□□□□ 0.34
ZNF3-205ENST00000413658 CARMIL1Q5VZK9 1371 aa17.17■□□□□ 0.34
ZNF3-205ENST00000413658 GRIN2AQ12879 1464 aa17.17■□□□□ 0.34
ZNF3-205ENST00000413658 CHMP7Q8WUX9 453 aaPredicted RBP17.16■□□□□ 0.34
ZNF3-205ENST00000413658 FBLN2P98095 1184 aa17.14■□□□□ 0.33
ZNF3-205ENST00000413658 PRXQ9BXM0 1461 aa17.14■□□□□ 0.33
ZNF3-205ENST00000413658 CSRNP3Q8WYN3 585 aa17.13■□□□□ 0.33
ZNF3-205ENST00000413658 CEP170Q5SW79 1584 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms