RNA–Protein interactions for RNA: ENST00000466121.1

ZNF3-212, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 522 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-212ENST00000466121 NISCHQ9Y2I1 1504 aa33.78■■■■□ 3
ZNF3-212ENST00000466121 CCDC180Q9P1Z9 1646 aa29.74■■■□□ 2.35
ZNF3-212ENST00000466121 ABCC9O60706 1549 aa28.53■■■□□ 2.16
ZNF3-212ENST00000466121 ZCCHC6Q5VYS8 1495 aaKnown RBP28.25■■■□□ 2.11
ZNF3-212ENST00000466121 DCAF8L2P0C7V8 631 aa28.07■■■□□ 2.08
ZNF3-212ENST00000466121 DCAF1Q9Y4B6 1507 aa27.88■■■□□ 2.05
ZNF3-212ENST00000466121 NACADO15069 1562 aa27.76■■■□□ 2.03
ZNF3-212ENST00000466121 MYO15BQ96JP2 1530 aa27.71■■■□□ 2.03
ZNF3-212ENST00000466121 RB1CC1Q8TDY2 1594 aa27.65■■■□□ 2.02
ZNF3-212ENST00000466121 SCRIBQ14160 1630 aa27.29■■□□□ 1.96
ZNF3-212ENST00000466121 UNC13AQ9UPW8 1703 aa27.26■■□□□ 1.95
ZNF3-212ENST00000466121 SHROOM4Q9ULL8 1493 aa27.25■■□□□ 1.95
ZNF3-212ENST00000466121 BICRAQ9NZM4 1560 aa26.86■■□□□ 1.89
ZNF3-212ENST00000466121 PABPN1Q86U42 306 aaKnown RBP eCLIP26.79■■□□□ 1.88
ZNF3-212ENST00000466121 CECR2Q9BXF3 1484 aa26.3■■□□□ 1.8
ZNF3-212ENST00000466121 SMARCA4P51532 1647 aa26.11■■□□□ 1.77
ZNF3-212ENST00000466121 BAZ1AQ9NRL2 1556 aaPredicted RBP26.11■■□□□ 1.77
ZNF3-212ENST00000466121 MROH2BQ7Z745 1585 aa26.1■■□□□ 1.77
ZNF3-212ENST00000466121 EIF4G1Q04637 1599 aaKnown RBP26.06■■□□□ 1.76
ZNF3-212ENST00000466121 RSF1Q96T23 1441 aaPredicted RBP25.99■■□□□ 1.75
ZNF3-212ENST00000466121 SUPT5HO00267 1087 aaKnown RBP25.95■■□□□ 1.74
ZNF3-212ENST00000466121 WIZO95785 1651 aa25.93■■□□□ 1.74
ZNF3-212ENST00000466121 CC2D2AQ9P2K1 1620 aa25.84■■□□□ 1.73
ZNF3-212ENST00000466121 PEG3Q9GZU2 1588 aa25.76■■□□□ 1.71
ZNF3-212ENST00000466121 ATAD2BQ9ULI0 1458 aa25.74■■□□□ 1.71
ZNF3-212ENST00000466121 SMARCA2P51531 1590 aa25.73■■□□□ 1.71
ZNF3-212ENST00000466121 DNAJC5BQ9UF47 199 aa25.59■■□□□ 1.69
ZNF3-212ENST00000466121 NCAPD3P42695 1498 aa25.58■■□□□ 1.69
ZNF3-212ENST00000466121 BAZ1BQ9UIG0 1483 aaKnown RBP25.58■■□□□ 1.69
ZNF3-212ENST00000466121 TOP2AP11388 1531 aaKnown RBP25.57■■□□□ 1.68
ZNF3-212ENST00000466121 HMGXB3Q12766 1538 aa25.53■■□□□ 1.68
ZNF3-212ENST00000466121 CCDC88BA6NC98 1476 aa25.3■■□□□ 1.64
ZNF3-212ENST00000466121 PRDM2Q13029 1718 aa24.93■■□□□ 1.58
ZNF3-212ENST00000466121 NESP48681 1621 aa24.91■■□□□ 1.58
ZNF3-212ENST00000466121 CADPSQ9ULU8 1353 aa24.89■■□□□ 1.57
ZNF3-212ENST00000466121 CFTRP13569 1480 aa24.88■■□□□ 1.57
ZNF3-212ENST00000466121 LAMC3Q9Y6N6 1575 aa24.84■■□□□ 1.57
ZNF3-212ENST00000466121 KIF21AQ7Z4S6 1674 aa24.69■■□□□ 1.54
ZNF3-212ENST00000466121 ABCC8Q09428 1581 aa24.66■■□□□ 1.54
ZNF3-212ENST00000466121 FANCD2Q9BXW9 1451 aa24.64■■□□□ 1.54
ZNF3-212ENST00000466121 PDS5BQ9NTI5 1447 aa24.61■■□□□ 1.53
ZNF3-212ENST00000466121 CHIC1Q5VXU3 224 aa24.57■■□□□ 1.52
ZNF3-212ENST00000466121 CEP164Q9UPV0 1460 aa24.54■■□□□ 1.52
ZNF3-212ENST00000466121 ERCC6Q03468 1493 aa24.48■■□□□ 1.51
ZNF3-212ENST00000466121 WRNQ14191 1432 aaPredicted RBP eCLIP24.47■■□□□ 1.51
ZNF3-212ENST00000466121 SYNJ1O43426 1573 aa24.46■■□□□ 1.51
ZNF3-212ENST00000466121 CUX1P39880 1505 aa24.44■■□□□ 1.5
ZNF3-212ENST00000466121 BIVM-ERCC5R4GMW8 1640 aa24.41■■□□□ 1.5
ZNF3-212ENST00000466121 TRIM41Q8WV44 630 aa24.4■■□□□ 1.5
ZNF3-212ENST00000466121 URB2Q14146 1524 aaKnown RBP24.39■■□□□ 1.49
ZNF3-212ENST00000466121 TOP2BQ02880 1626 aa24.38■■□□□ 1.49
ZNF3-212ENST00000466121 DNMBPQ6XZF7 1577 aa24.37■■□□□ 1.49
ZNF3-212ENST00000466121 MRC2Q9UBG0 1479 aa24.36■■□□□ 1.49
ZNF3-212ENST00000466121 TOPBP1Q92547 1522 aa24.35■■□□□ 1.49
ZNF3-212ENST00000466121 THOC2Q8NI27 1593 aaKnown RBP24.34■■□□□ 1.49
ZNF3-212ENST00000466121 WDR62O43379 1518 aa24.25■■□□□ 1.47
ZNF3-212ENST00000466121 FGD5Q6ZNL6 1462 aa24.24■■□□□ 1.47
ZNF3-212ENST00000466121 POLA1P09884 1462 aaPredicted RBP24.17■■□□□ 1.46
ZNF3-212ENST00000466121 RAD54L2Q9Y4B4 1467 aa24.12■■□□□ 1.45
ZNF3-212ENST00000466121 SOGA1O94964 1423 aa24.09■■□□□ 1.45
ZNF3-212ENST00000466121 CUX2O14529 1486 aa24.07■■□□□ 1.44
ZNF3-212ENST00000466121 WDR97A6NE52 1622 aa24.06■■□□□ 1.44
ZNF3-212ENST00000466121 TARBP1Q13395 1621 aaKnown RBP24.06■■□□□ 1.44
ZNF3-212ENST00000466121 RUSC2Q8N2Y8 1516 aa24.03■■□□□ 1.44
ZNF3-212ENST00000466121 FAM9AQ8IZU1 332 aaPredicted RBP24■■□□□ 1.43
ZNF3-212ENST00000466121 ABCA10Q8WWZ4 1543 aa23.98■■□□□ 1.43
ZNF3-212ENST00000466121 IFT140Q96RY7 1462 aa23.96■■□□□ 1.43
ZNF3-212ENST00000466121 TDRD9Q8NDG6 1382 aaKnown RBP23.9■■□□□ 1.42
ZNF3-212ENST00000466121 ZNF608Q9ULD9 1512 aaPredicted RBP23.89■■□□□ 1.42
ZNF3-212ENST00000466121 KIF27Q86VH2 1401 aa23.89■■□□□ 1.41
ZNF3-212ENST00000466121 ABCA5Q8WWZ7 1642 aa23.88■■□□□ 1.41
ZNF3-212ENST00000466121 PBRM1Q86U86 1689 aa23.85■■□□□ 1.41
ZNF3-212ENST00000466121 AQRO60306 1485 aaKnown RBP eCLIP23.84■■□□□ 1.411e-7■■■■■ 43.3
ZNF3-212ENST00000466121 EEA1Q15075 1411 aa23.84■■□□□ 1.41
ZNF3-212ENST00000466121 EIF4G3O43432 1585 aaKnown RBP23.83■■□□□ 1.41
ZNF3-212ENST00000466121 GAPVD1Q14C86 1478 aa23.82■■□□□ 1.4
ZNF3-212ENST00000466121 CSRNP3Q8WYN3 585 aa23.79■■□□□ 1.4
ZNF3-212ENST00000466121 IGF1RP08069 1367 aa23.73■■□□□ 1.39
ZNF3-212ENST00000466121 EHMT2Q96KQ7 1210 aa23.72■■□□□ 1.39
ZNF3-212ENST00000466121 ERICH3Q5RHP9 1530 aa23.7■■□□□ 1.38
ZNF3-212ENST00000466121 GRIN2BQ13224 1484 aa23.68■■□□□ 1.38
ZNF3-212ENST00000466121 CUL7Q14999 1698 aa23.67■■□□□ 1.38
ZNF3-212ENST00000466121 LOC105371045A0A1W2PR82 267 aa23.66■■□□□ 1.38
ZNF3-212ENST00000466121 KIF21BO75037 1637 aa23.64■■□□□ 1.38
ZNF3-212ENST00000466121 CARMIL1Q5VZK9 1371 aa23.62■■□□□ 1.37
ZNF3-212ENST00000466121 SNAPC4Q5SXM2 1469 aa23.62■■□□□ 1.37
ZNF3-212ENST00000466121 PRXQ9BXM0 1461 aa23.61■■□□□ 1.37
ZNF3-212ENST00000466121 ADAMTS12P58397 1594 aa23.6■■□□□ 1.37
ZNF3-212ENST00000466121 RAPGEF2Q9Y4G8 1499 aa23.57■■□□□ 1.36
ZNF3-212ENST00000466121 MAGI1Q96QZ7 1491 aaPredicted RBP23.54■■□□□ 1.36
ZNF3-212ENST00000466121 FHAD1B1AJZ9 1412 aa23.52■■□□□ 1.36
ZNF3-212ENST00000466121 GOLGA3Q08378 1498 aa23.52■■□□□ 1.36
ZNF3-212ENST00000466121 CHD1O14646 1710 aa23.5■■□□□ 1.35
ZNF3-212ENST00000466121 UBTFP17480 764 aaKnown RBP23.46■■□□□ 1.35
ZNF3-212ENST00000466121 SYNJ2O15056 1496 aa23.45■■□□□ 1.34
ZNF3-212ENST00000466121 FBLN2P98095 1184 aa23.44■■□□□ 1.34
ZNF3-212ENST00000466121 CHMP7Q8WUX9 453 aaPredicted RBP23.42■■□□□ 1.34
ZNF3-212ENST00000466121 CTTNBP2Q8WZ74 1663 aa23.41■■□□□ 1.34
ZNF3-212ENST00000466121 GRIN2AQ12879 1464 aa23.41■■□□□ 1.34
ZNF3-212ENST00000466121 TNIKQ9UKE5 1360 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms