Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.349e-6■■■■■ 32.4
XRN2Q9H0D6 COL27A1-205ENST00000485397 463 ntTSL 523.43■■□□□ 1.341e-10■■■■■ 32.4
XRN2Q9H0D6 HRAS-207ENST00000468682 749 ntTSL 323.41■■□□□ 1.349e-6■■■■■ 32.4
XRN2Q9H0D6 PEAK1-210ENST00000569159 531 ntTSL 423.41■■□□□ 1.349e-6■■■■■ 32.4
XRN2Q9H0D6 DDR1-280ENST00000515881 956 ntTSL 323.4■■□□□ 1.349e-6■■■■■ 32.4
XRN2Q9H0D6 NOC4L-203ENST00000538784 862 ntTSL 223.36■■□□□ 1.339e-6■■■■■ 32.4
XRN2Q9H0D6 TPRA1-206ENST00000465915 569 ntTSL 323.22■■□□□ 1.319e-6■■■■■ 32.4
XRN2Q9H0D6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.15■■□□□ 1.39e-6■■■■■ 32.4
XRN2Q9H0D6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.15■■□□□ 1.31e-10■■■■■ 32.4
XRN2Q9H0D6 AL590326.2-201ENST00000625139 305 ntBASIC23.14■■□□□ 1.299e-6■■■■■ 32.4
XRN2Q9H0D6 DDR1-265ENST00000509639 615 ntTSL 423.12■■□□□ 1.299e-6■■■■■ 32.4
XRN2Q9H0D6 DDR1-259ENST00000507046 573 ntTSL 423.12■■□□□ 1.299e-6■■■■■ 32.4
XRN2Q9H0D6 GGA1-214ENST00000449944 927 ntTSL 523.06■■□□□ 1.289e-6■■■■■ 32.4
XRN2Q9H0D6 MYL5-203ENST00000503300 1780 ntTSL 223.04■■□□□ 1.289e-6■■■■■ 32.4
XRN2Q9H0D6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC23.03■■□□□ 1.289e-6■■■■■ 32.4
XRN2Q9H0D6 SEC63-203ENST00000446496 583 ntTSL 422.95■■□□□ 1.269e-6■■■■■ 32.4
XRN2Q9H0D6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.91■■□□□ 1.269e-6■■■■■ 32.4
XRN2Q9H0D6 DDR1-274ENST00000513749 584 ntTSL 522.86■■□□□ 1.259e-6■■■■■ 32.4
XRN2Q9H0D6 DDR1-266ENST00000511510 547 ntTSL 522.86■■□□□ 1.259e-6■■■■■ 32.4
XRN2Q9H0D6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.249e-6■■■■■ 32.4
XRN2Q9H0D6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.239e-6■■■■■ 32.4
XRN2Q9H0D6 SPPL3-208ENST00000543854 508 ntTSL 522.6■■□□□ 1.219e-6■■■■■ 32.4
XRN2Q9H0D6 MGAT4B-209ENST00000519836 1686 ntTSL 1 (best)22.59■■□□□ 1.219e-6■■■■■ 32.4
XRN2Q9H0D6 CTSH-202ENST00000525807 1122 ntTSL 522.58■■□□□ 1.219e-6■■■■■ 32.4
XRN2Q9H0D6 SLC6A9-208ENST00000489764 930 ntTSL 322.57■■□□□ 1.23e-6■■■■■ 32.4
XRN2Q9H0D6 THRB-210ENST00000447414 575 ntTSL 422.54■■□□□ 1.29e-6■■■■■ 32.4
XRN2Q9H0D6 CTSH-214ENST00000534038 593 ntTSL 422.46■■□□□ 1.199e-6■■■■■ 32.4
XRN2Q9H0D6 CTSH-216ENST00000534268 622 ntTSL 522.46■■□□□ 1.199e-6■■■■■ 32.4
XRN2Q9H0D6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.179e-6■■■■■ 32.4
XRN2Q9H0D6 CANT1-212ENST00000591811 466 ntTSL 222.27■■□□□ 1.169e-6■■■■■ 32.4
XRN2Q9H0D6 LMNB2-205ENST00000532465 769 ntTSL 322.25■■□□□ 1.159e-6■■■■■ 32.4
XRN2Q9H0D6 NCL-205ENST00000453992 964 ntTSL 422.14■■□□□ 1.131e-10■■■■■ 32.4
XRN2Q9H0D6 YIF1A-212ENST00000528575 532 ntTSL 322.1■■□□□ 1.139e-6■■■■■ 32.4
XRN2Q9H0D6 PRKCZ-218ENST00000482686 614 ntTSL 322.09■■□□□ 1.139e-6■■■■■ 32.4
XRN2Q9H0D6 PRKCZ-220ENST00000486681 966 ntTSL 322.09■■□□□ 1.139e-6■■■■■ 32.4
XRN2Q9H0D6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.125e-6■■■■■ 32.4
XRN2Q9H0D6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.88■■□□□ 1.099e-6■■■■■ 32.4
XRN2Q9H0D6 THOC7-207ENST00000498422 738 ntTSL 321.87■■□□□ 1.094e-7■■■■■ 32.4
XRN2Q9H0D6 CTSH-206ENST00000528436 268 ntTSL 321.86■■□□□ 1.099e-6■■■■■ 32.4
XRN2Q9H0D6 FURIN-202ENST00000558794 844 ntTSL 521.84■■□□□ 1.099e-6■■■■■ 32.4
XRN2Q9H0D6 AFF1-208ENST00000511722 638 ntTSL 421.81■■□□□ 1.081e-6■■■■■ 32.4
XRN2Q9H0D6 HRAS-211ENST00000493230 1114 ntTSL 1 (best)21.78■■□□□ 1.089e-6■■■■■ 32.4
XRN2Q9H0D6 RANBP1-207ENST00000423859 832 ntTSL 321.72■■□□□ 1.079e-9■■■■■ 32.4
XRN2Q9H0D6 AC005726.2-201ENST00000481916 2091 ntTSL 1 (best)21.7■■□□□ 1.062e-8■■■■■ 32.4
XRN2Q9H0D6 SLC41A3-205ENST00000504035 526 ntTSL 421.65■■□□□ 1.069e-6■■■■■ 32.4
XRN2Q9H0D6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.069e-6■■■■■ 32.4
XRN2Q9H0D6 PALM-206ENST00000589012 579 ntTSL 321.59■■□□□ 1.059e-6■■■■■ 32.4
XRN2Q9H0D6 DNAJB12-205ENST00000463786 2116 ntTSL 221.49■■□□□ 1.039e-6■■■■■ 32.4
XRN2Q9H0D6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.039e-6■■■■■ 32.4
XRN2Q9H0D6 CTSH-211ENST00000530010 556 ntTSL 221.45■■□□□ 1.029e-6■■■■■ 32.4
XRN2Q9H0D6 ABTB1-210ENST00000478298 818 ntTSL 521.44■■□□□ 1.029e-6■■■■■ 32.4
XRN2Q9H0D6 NAPRT-208ENST00000480946 1199 ntTSL 521.37■■□□□ 1.019e-6■■■■■ 32.4
XRN2Q9H0D6 RANBP1-210ENST00000435265 1879 ntTSL 221.35■■□□□ 1.019e-9■■■■■ 32.4
XRN2Q9H0D6 DDR1-241ENST00000460944 1248 ntTSL 521.35■■□□□ 1.019e-6■■■■■ 32.4
XRN2Q9H0D6 STX12-202ENST00000440806 718 ntTSL 321.35■■□□□ 1.019e-6■■■■■ 32.4
XRN2Q9H0D6 SHKBP1-223ENST00000600552 566 ntTSL 421.35■■□□□ 1.019e-6■■■■■ 32.4
XRN2Q9H0D6 FURIN-204ENST00000560018 421 ntTSL 221.34■■□□□ 1.019e-6■■■■■ 32.4
XRN2Q9H0D6 ABCF3-217ENST00000489719 569 ntTSL 421.15■□□□□ 0.989e-6■■■■■ 32.4
XRN2Q9H0D6 TECPR1-214ENST00000483740 684 ntTSL 321.13■□□□□ 0.979e-6■■■■■ 32.4
XRN2Q9H0D6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.11■□□□□ 0.979e-6■■■■■ 32.4
XRN2Q9H0D6 KCTD15-205ENST00000588637 571 ntTSL 521.03■□□□□ 0.963e-8■■■■■ 32.4
XRN2Q9H0D6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.959e-6■■■■■ 32.4
XRN2Q9H0D6 ITPKC-202ENST00000597003 582 ntTSL 220.99■□□□□ 0.959e-6■■■■■ 32.4
XRN2Q9H0D6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.98■□□□□ 0.959e-6■■■■■ 32.4
XRN2Q9H0D6 CTSH-210ENST00000529861 857 ntTSL 320.92■□□□□ 0.949e-6■■■■■ 32.4
XRN2Q9H0D6 ZNHIT3-207ENST00000619482 561 ntTSL 220.92■□□□□ 0.949e-6■■■■■ 32.4
XRN2Q9H0D6 CANT1-205ENST00000588075 881 ntTSL 220.91■□□□□ 0.949e-6■■■■■ 32.4
XRN2Q9H0D6 DDR1-257ENST00000505534 673 ntTSL 420.9■□□□□ 0.949e-6■■■■■ 32.4
XRN2Q9H0D6 AP1S3-205ENST00000415298 2515 ntTSL 1 (best)20.83■□□□□ 0.939e-6■■■■■ 32.4
XRN2Q9H0D6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.82■□□□□ 0.929e-6■■■■■ 32.4
XRN2Q9H0D6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.8■□□□□ 0.929e-6■■■■■ 32.4
XRN2Q9H0D6 MYO1B-205ENST00000418908 572 ntTSL 420.74■□□□□ 0.919e-6■■■■■ 32.4
XRN2Q9H0D6 COL18A1-207ENST00000473212 2515 ntTSL 220.64■□□□□ 0.894e-6■■■■■ 32.4
XRN2Q9H0D6 PEAK1-208ENST00000567337 555 ntTSL 420.59■□□□□ 0.899e-6■■■■■ 32.4
XRN2Q9H0D6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.899e-6■■■■■ 32.4
XRN2Q9H0D6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.889e-6■■■■■ 32.4
XRN2Q9H0D6 RECQL5-216ENST00000582548 709 ntTSL 520.49■□□□□ 0.879e-6■■■■■ 32.4
XRN2Q9H0D6 TOX4-202ENST00000447695 633 ntTSL 420.38■□□□□ 0.859e-6■■■■■ 32.4
XRN2Q9H0D6 TOX4-209ENST00000487242 544 ntTSL 220.38■□□□□ 0.859e-6■■■■■ 32.4
XRN2Q9H0D6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.34■□□□□ 0.859e-6■■■■■ 32.4
XRN2Q9H0D6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.819e-6■■■■■ 32.4
XRN2Q9H0D6 DDR1-243ENST00000482050 246 ntTSL 520.07■□□□□ 0.89e-6■■■■■ 32.4
XRN2Q9H0D6 DDR1-270ENST00000513043 604 ntTSL 420.07■□□□□ 0.89e-6■■■■■ 32.4
XRN2Q9H0D6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.02■□□□□ 0.89e-6■■■■■ 32.4
XRN2Q9H0D6 TIMM44-210ENST00000599939 2227 nt20■□□□□ 0.799e-6■■■■■ 32.4
XRN2Q9H0D6 TIMM44-206ENST00000598481 587 ntTSL 219.96■□□□□ 0.799e-6■■■■■ 32.4
XRN2Q9H0D6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.789e-6■■■■■ 32.4
XRN2Q9H0D6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.9■□□□□ 0.789e-6■■■■■ 32.4
XRN2Q9H0D6 RANBP1-205ENST00000418705 932 ntTSL 319.89■□□□□ 0.779e-9■■■■■ 32.4
XRN2Q9H0D6 NHP2-205ENST00000511078 475 ntTSL 219.86■□□□□ 0.779e-6■■■■■ 32.4
XRN2Q9H0D6 DDR1-256ENST00000505066 556 ntTSL 419.82■□□□□ 0.769e-6■■■■■ 32.4
XRN2Q9H0D6 DDR1-263ENST00000508317 538 ntTSL 419.82■□□□□ 0.769e-6■■■■■ 32.4
XRN2Q9H0D6 DDR1-229ENST00000396342 675 ntTSL 319.82■□□□□ 0.769e-6■■■■■ 32.4
XRN2Q9H0D6 AP1S3-207ENST00000444408 561 ntTSL 419.81■□□□□ 0.769e-6■■■■■ 32.4
XRN2Q9H0D6 PEAK1-206ENST00000564328 2323 ntTSL 519.8■□□□□ 0.769e-6■■■■■ 32.4
XRN2Q9H0D6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.759e-6■■■■■ 32.4
XRN2Q9H0D6 SLC41A3-214ENST00000510651 580 ntTSL 319.74■□□□□ 0.759e-6■■■■■ 32.4
XRN2Q9H0D6 SLC41A3-218ENST00000513723 923 ntTSL 519.74■□□□□ 0.759e-6■■■■■ 32.4
XRN2Q9H0D6 SLC41A3-219ENST00000514023 652 ntTSL 419.74■□□□□ 0.759e-6■■■■■ 32.4
XRN2Q9H0D6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.7■□□□□ 0.741e-6■■■■■ 32.4
Retrieved 100 of 21,068 protein–RNA pairs in 477.7 ms