RNA–Protein interactions for RNA: ENST00000511078.1

NHP2-205, Transcript of NHP2 ribonucleoprotein, humanhuman

TSL 2

Gene NHP2, Length 475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHP2-205ENST00000511078 NISCHQ9Y2I1 1504 aa41.25■■■■■ 4.19
NHP2-205ENST00000511078 CCDC180Q9P1Z9 1646 aa36.93■■■■□ 3.5
NHP2-205ENST00000511078 ABCC9O60706 1549 aa36.4■■■■□ 3.42
NHP2-205ENST00000511078 RB1CC1Q8TDY2 1594 aa34.9■■■■□ 3.18
NHP2-205ENST00000511078 NACADO15069 1562 aa34.76■■■■□ 3.16
NHP2-205ENST00000511078 MYO15BQ96JP2 1530 aa34.45■■■■□ 3.11
NHP2-205ENST00000511078 DCAF8L2P0C7V8 631 aa34.44■■■■□ 3.1
NHP2-205ENST00000511078 ZCCHC6Q5VYS8 1495 aaKnown RBP34.32■■■■□ 3.08
NHP2-205ENST00000511078 DCAF1Q9Y4B6 1507 aa34.15■■■■□ 3.06
NHP2-205ENST00000511078 UNC13AQ9UPW8 1703 aa34.15■■■■□ 3.06
NHP2-205ENST00000511078 PABPN1Q86U42 306 aaKnown RBP eCLIP33.87■■■■□ 3.01
NHP2-205ENST00000511078 BICRAQ9NZM4 1560 aa33.86■■■■□ 3.01
NHP2-205ENST00000511078 DNAJC5BQ9UF47 199 aa33.7■■■□□ 2.99
NHP2-205ENST00000511078 SCRIBQ14160 1630 aa33.61■■■□□ 2.97
NHP2-205ENST00000511078 SHROOM4Q9ULL8 1493 aa33.53■■■□□ 2.96
NHP2-205ENST00000511078 EIF4G1Q04637 1599 aaKnown RBP33■■■□□ 2.87
NHP2-205ENST00000511078 CC2D2AQ9P2K1 1620 aa32.95■■■□□ 2.87
NHP2-205ENST00000511078 CECR2Q9BXF3 1484 aa32.77■■■□□ 2.84
NHP2-205ENST00000511078 SMARCA4P51532 1647 aa32.12■■■□□ 2.73
NHP2-205ENST00000511078 NCAPD3P42695 1498 aa32.04■■■□□ 2.72
NHP2-205ENST00000511078 BAZ1AQ9NRL2 1556 aaPredicted RBP32.02■■■□□ 2.72
NHP2-205ENST00000511078 ATAD2BQ9ULI0 1458 aa32.01■■■□□ 2.71
NHP2-205ENST00000511078 SMARCA2P51531 1590 aa31.98■■■□□ 2.71
NHP2-205ENST00000511078 HMGXB3Q12766 1538 aa31.92■■■□□ 2.7
NHP2-205ENST00000511078 PEG3Q9GZU2 1588 aa31.84■■■□□ 2.69
NHP2-205ENST00000511078 MROH2BQ7Z745 1585 aa31.77■■■□□ 2.68
NHP2-205ENST00000511078 BAZ1BQ9UIG0 1483 aaKnown RBP31.73■■■□□ 2.67
NHP2-205ENST00000511078 WIZO95785 1651 aa31.42■■■□□ 2.62
NHP2-205ENST00000511078 ERCC6Q03468 1493 aa31.42■■■□□ 2.62
NHP2-205ENST00000511078 NESP48681 1621 aa31.39■■■□□ 2.62
NHP2-205ENST00000511078 LAMC3Q9Y6N6 1575 aa31.3■■■□□ 2.6
NHP2-205ENST00000511078 CUX2O14529 1486 aa31.27■■■□□ 2.6
NHP2-205ENST00000511078 RSF1Q96T23 1441 aaPredicted RBP31.24■■■□□ 2.59
NHP2-205ENST00000511078 TOP2AP11388 1531 aaKnown RBP31.09■■■□□ 2.57
NHP2-205ENST00000511078 THOC2Q8NI27 1593 aaKnown RBP31.09■■■□□ 2.57
NHP2-205ENST00000511078 KIF21AQ7Z4S6 1674 aa31.07■■■□□ 2.56
NHP2-205ENST00000511078 CADPSQ9ULU8 1353 aa31.06■■■□□ 2.56
NHP2-205ENST00000511078 PDS5BQ9NTI5 1447 aa31.06■■■□□ 2.56
NHP2-205ENST00000511078 CFTRP13569 1480 aa30.83■■■□□ 2.53
NHP2-205ENST00000511078 MRC2Q9UBG0 1479 aa30.8■■■□□ 2.52
NHP2-205ENST00000511078 CEP164Q9UPV0 1460 aa30.76■■■□□ 2.52
NHP2-205ENST00000511078 FANCD2Q9BXW9 1451 aa30.75■■■□□ 2.51
NHP2-205ENST00000511078 WDR62O43379 1518 aa30.74■■■□□ 2.51
NHP2-205ENST00000511078 DNAJC5Q9H3Z4 198 aa30.67■■■□□ 2.5
NHP2-205ENST00000511078 CCDC88BA6NC98 1476 aa30.67■■■□□ 2.5
NHP2-205ENST00000511078 PRDM2Q13029 1718 aa30.67■■■□□ 2.5
NHP2-205ENST00000511078 URB2Q14146 1524 aaKnown RBP30.47■■■□□ 2.47
NHP2-205ENST00000511078 TOPBP1Q92547 1522 aa30.22■■■□□ 2.43
NHP2-205ENST00000511078 DNMBPQ6XZF7 1577 aa30.18■■■□□ 2.42
NHP2-205ENST00000511078 ABCC8Q09428 1581 aa30.17■■■□□ 2.42
NHP2-205ENST00000511078 IFT140Q96RY7 1462 aa30.12■■■□□ 2.41
NHP2-205ENST00000511078 SUPT5HO00267 1087 aaKnown RBP30.05■■■□□ 2.4
NHP2-205ENST00000511078 ZNF608Q9ULD9 1512 aaPredicted RBP30.01■■■□□ 2.4
NHP2-205ENST00000511078 TARBP1Q13395 1621 aaKnown RBP29.95■■■□□ 2.38
NHP2-205ENST00000511078 EIF4G3O43432 1585 aaKnown RBP29.94■■■□□ 2.38
NHP2-205ENST00000511078 POLA1P09884 1462 aaPredicted RBP29.93■■■□□ 2.38
NHP2-205ENST00000511078 CUX1P39880 1505 aa29.85■■■□□ 2.37
NHP2-205ENST00000511078 FGD5Q6ZNL6 1462 aa29.8■■■□□ 2.36
NHP2-205ENST00000511078 OSCARQ8IYS5 282 aa29.78■■■□□ 2.36
NHP2-205ENST00000511078 RAD54L2Q9Y4B4 1467 aa29.77■■■□□ 2.36
NHP2-205ENST00000511078 AQRO60306 1485 aaKnown RBP eCLIP29.75■■■□□ 2.357e-6■■□□□ 13.1
NHP2-205ENST00000511078 SOGA1O94964 1423 aa29.75■■■□□ 2.35
NHP2-205ENST00000511078 WDR97A6NE52 1622 aa29.72■■■□□ 2.35
NHP2-205ENST00000511078 CHD1O14646 1710 aa29.62■■■□□ 2.33
NHP2-205ENST00000511078 TDRD9Q8NDG6 1382 aaKnown RBP29.62■■■□□ 2.33
NHP2-205ENST00000511078 SNAPC4Q5SXM2 1469 aa29.52■■■□□ 2.32
NHP2-205ENST00000511078 BIVM-ERCC5R4GMW8 1640 aa29.52■■■□□ 2.32
NHP2-205ENST00000511078 TOP2BQ02880 1626 aa29.51■■■□□ 2.31
NHP2-205ENST00000511078 ABCA10Q8WWZ4 1543 aa29.5■■■□□ 2.31
NHP2-205ENST00000511078 GRIN2BQ13224 1484 aa29.49■■■□□ 2.31
NHP2-205ENST00000511078 MAGI1Q96QZ7 1491 aaPredicted RBP29.48■■■□□ 2.31
NHP2-205ENST00000511078 WRNQ14191 1432 aaPredicted RBP eCLIP29.48■■■□□ 2.31
NHP2-205ENST00000511078 SYNJ1O43426 1573 aa29.47■■■□□ 2.31
NHP2-205ENST00000511078 RIMBP3CA6NJZ7 1639 aa29.47■■■□□ 2.31
NHP2-205ENST00000511078 RIMBP3BA6NNM3 1639 aa29.47■■■□□ 2.31
NHP2-205ENST00000511078 ABCA5Q8WWZ7 1642 aa29.47■■■□□ 2.31
NHP2-205ENST00000511078 RIMBP3Q9UFD9 1639 aa29.47■■■□□ 2.31
NHP2-205ENST00000511078 PBRM1Q86U86 1689 aa29.47■■■□□ 2.31
NHP2-205ENST00000511078 TRIM41Q8WV44 630 aa29.46■■■□□ 2.31
NHP2-205ENST00000511078 GAPVD1Q14C86 1478 aa29.43■■■□□ 2.3
NHP2-205ENST00000511078 ARHGEF11O15085 1522 aa29.42■■■□□ 2.3
NHP2-205ENST00000511078 FBLN2P98095 1184 aa29.41■■■□□ 2.3
NHP2-205ENST00000511078 SYNJ2O15056 1496 aa29.36■■■□□ 2.29
NHP2-205ENST00000511078 CLASP1Q7Z460 1538 aa29.3■■■□□ 2.28
NHP2-205ENST00000511078 CHMP7Q8WUX9 453 aaPredicted RBP29.28■■■□□ 2.28
NHP2-205ENST00000511078 ADAMTS12P58397 1594 aa29.22■■■□□ 2.27
NHP2-205ENST00000511078 ERICH3Q5RHP9 1530 aa29.16■■■□□ 2.26
NHP2-205ENST00000511078 ARAP1Q96P48 1450 aa29.16■■■□□ 2.26
NHP2-205ENST00000511078 GRIN2AQ12879 1464 aa29.13■■■□□ 2.25
NHP2-205ENST00000511078 FHAD1B1AJZ9 1412 aa29.08■■■□□ 2.25
NHP2-205ENST00000511078 CYB5RLQ6IPT4 315 aa29.04■■■□□ 2.24
NHP2-205ENST00000511078 CEP170Q5SW79 1584 aa29.02■■■□□ 2.24
NHP2-205ENST00000511078 NUP160Q12769 1436 aa29.02■■■□□ 2.24
NHP2-205ENST00000511078 SHROOM2Q13796 1616 aa28.89■■■□□ 2.22
NHP2-205ENST00000511078 KIF27Q86VH2 1401 aa28.88■■■□□ 2.21
NHP2-205ENST00000511078 CUL7Q14999 1698 aa28.85■■■□□ 2.21
NHP2-205ENST00000511078 ERCC6L2Q5T890 1561 aa28.83■■■□□ 2.21
NHP2-205ENST00000511078 RUSC2Q8N2Y8 1516 aa28.8■■■□□ 2.2
NHP2-205ENST00000511078 IGF1RP08069 1367 aa28.79■■■□□ 2.2
NHP2-205ENST00000511078 PRG4Q92954 1404 aaPredicted RBP28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms