RNA–Protein interactions for RNA: ENST00000449944.5

GGA1-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 5

Gene GGA1, Length 927 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-214ENST00000449944 NISCHQ9Y2I1 1504 aa47.23■■■■■ 5.15
GGA1-214ENST00000449944 ABCC9O60706 1549 aa42.74■■■■■ 4.43
GGA1-214ENST00000449944 CCDC180Q9P1Z9 1646 aa42.46■■■■■ 4.39
GGA1-214ENST00000449944 RB1CC1Q8TDY2 1594 aa40.54■■■■■ 4.08
GGA1-214ENST00000449944 DNAJC5BQ9UF47 199 aa40.24■■■■■ 4.03
GGA1-214ENST00000449944 NACADO15069 1562 aa40.18■■■■■ 4.02
GGA1-214ENST00000449944 DCAF8L2P0C7V8 631 aa40.08■■■■■ 4.01
GGA1-214ENST00000449944 PABPN1Q86U42 306 aaKnown RBP eCLIP39.77■■■■□ 3.965e-10■■□□□ 14.4
GGA1-214ENST00000449944 UNC13AQ9UPW8 1703 aa39.65■■■■□ 3.94
GGA1-214ENST00000449944 MYO15BQ96JP2 1530 aa39.51■■■■□ 3.92
GGA1-214ENST00000449944 BICRAQ9NZM4 1560 aa39.36■■■■□ 3.89
GGA1-214ENST00000449944 ZCCHC6Q5VYS8 1495 aaKnown RBP39.1■■■■□ 3.85
GGA1-214ENST00000449944 DCAF1Q9Y4B6 1507 aa38.94■■■■□ 3.82
GGA1-214ENST00000449944 SCRIBQ14160 1630 aa38.75■■■■□ 3.79
GGA1-214ENST00000449944 SHROOM4Q9ULL8 1493 aa38.74■■■■□ 3.79
GGA1-214ENST00000449944 CC2D2AQ9P2K1 1620 aa38.57■■■■□ 3.77
GGA1-214ENST00000449944 CECR2Q9BXF3 1484 aa38.49■■■■□ 3.75
GGA1-214ENST00000449944 EIF4G1Q04637 1599 aaKnown RBP38.42■■■■□ 3.74
GGA1-214ENST00000449944 NCAPD3P42695 1498 aa37.09■■■■□ 3.53
GGA1-214ENST00000449944 DNAJC5Q9H3Z4 198 aa37.08■■■■□ 3.53
GGA1-214ENST00000449944 ATAD2BQ9ULI0 1458 aa36.98■■■■□ 3.51
GGA1-214ENST00000449944 ERCC6Q03468 1493 aa36.92■■■■□ 3.5
GGA1-214ENST00000449944 SMARCA4P51532 1647 aa36.91■■■■□ 3.5
GGA1-214ENST00000449944 SMARCA2P51531 1590 aa36.87■■■■□ 3.49
GGA1-214ENST00000449944 CUX2O14529 1486 aa36.86■■■■□ 3.49
GGA1-214ENST00000449944 HMGXB3Q12766 1538 aa36.81■■■■□ 3.48
GGA1-214ENST00000449944 BAZ1AQ9NRL2 1556 aaPredicted RBP36.69■■■■□ 3.46
GGA1-214ENST00000449944 NESP48681 1621 aa36.65■■■■□ 3.46
GGA1-214ENST00000449944 BAZ1BQ9UIG0 1483 aaKnown RBP36.64■■■■□ 3.46
GGA1-214ENST00000449944 PEG3Q9GZU2 1588 aa36.49■■■■□ 3.43
GGA1-214ENST00000449944 MROH2BQ7Z745 1585 aa36.42■■■■□ 3.42
GGA1-214ENST00000449944 LAMC3Q9Y6N6 1575 aa36.32■■■■□ 3.4
GGA1-214ENST00000449944 THOC2Q8NI27 1593 aaKnown RBP36.28■■■■□ 3.4
GGA1-214ENST00000449944 KIF21AQ7Z4S6 1674 aa36.16■■■■□ 3.38
GGA1-214ENST00000449944 PDS5BQ9NTI5 1447 aa36.12■■■■□ 3.37
GGA1-214ENST00000449944 WIZO95785 1651 aa36■■■■□ 3.35
GGA1-214ENST00000449944 CADPSQ9ULU8 1353 aa35.98■■■■□ 3.35
GGA1-214ENST00000449944 MRC2Q9UBG0 1479 aa35.83■■■■□ 3.33
GGA1-214ENST00000449944 WDR62O43379 1518 aa35.73■■■■□ 3.31
GGA1-214ENST00000449944 CEP164Q9UPV0 1460 aa35.67■■■■□ 3.3
GGA1-214ENST00000449944 FANCD2Q9BXW9 1451 aa35.6■■■■□ 3.29
GGA1-214ENST00000449944 RSF1Q96T23 1441 aaPredicted RBP35.57■■■■□ 3.28
GGA1-214ENST00000449944 CFTRP13569 1480 aa35.52■■■■□ 3.28
GGA1-214ENST00000449944 TOP2AP11388 1531 aaKnown RBP35.48■■■■□ 3.27
GGA1-214ENST00000449944 TRIM41Q8WV44 630 aa35.46■■■■□ 3.27
GGA1-214ENST00000449944 URB2Q14146 1524 aaKnown RBP35.32■■■■□ 3.24
GGA1-214ENST00000449944 OSCARQ8IYS5 282 aa35.17■■■■□ 3.22
GGA1-214ENST00000449944 PRDM2Q13029 1718 aa35.17■■■■□ 3.22
GGA1-214ENST00000449944 CCDC88BA6NC98 1476 aa35.09■■■■□ 3.21
GGA1-214ENST00000449944 ZNF608Q9ULD9 1512 aaPredicted RBP34.93■■■■□ 3.18
GGA1-214ENST00000449944 IFT140Q96RY7 1462 aa34.93■■■■□ 3.18
GGA1-214ENST00000449944 TOPBP1Q92547 1522 aa34.9■■■■□ 3.18
GGA1-214ENST00000449944 ABCC8Q09428 1581 aa34.77■■■■□ 3.16
GGA1-214ENST00000449944 RIMBP3CA6NJZ7 1639 aa34.75■■■■□ 3.15
GGA1-214ENST00000449944 RIMBP3BA6NNM3 1639 aa34.75■■■■□ 3.15
GGA1-214ENST00000449944 RIMBP3Q9UFD9 1639 aa34.75■■■■□ 3.15
GGA1-214ENST00000449944 DNMBPQ6XZF7 1577 aa34.74■■■■□ 3.15
GGA1-214ENST00000449944 EIF4G3O43432 1585 aaKnown RBP34.73■■■■□ 3.15
GGA1-214ENST00000449944 ARHGEF11O15085 1522 aa34.61■■■■□ 3.13
GGA1-214ENST00000449944 TARBP1Q13395 1621 aaKnown RBP34.59■■■■□ 3.13
GGA1-214ENST00000449944 AQRO60306 1485 aaKnown RBP eCLIP34.59■■■■□ 3.132e-6■■□□□ 13.2
GGA1-214ENST00000449944 POLA1P09884 1462 aaPredicted RBP34.52■■■■□ 3.12
GGA1-214ENST00000449944 CHD1O14646 1710 aa34.52■■■■□ 3.12
GGA1-214ENST00000449944 FBLN2P98095 1184 aa34.46■■■■□ 3.11
GGA1-214ENST00000449944 RAD54L2Q9Y4B4 1467 aa34.43■■■■□ 3.1
GGA1-214ENST00000449944 CYB5RLQ6IPT4 315 aa34.4■■■■□ 3.1
GGA1-214ENST00000449944 SOGA1O94964 1423 aa34.38■■■■□ 3.09
GGA1-214ENST00000449944 TDRD9Q8NDG6 1382 aaKnown RBP34.36■■■■□ 3.09
GGA1-214ENST00000449944 FGD5Q6ZNL6 1462 aa34.3■■■■□ 3.08
GGA1-214ENST00000449944 ARAP1Q96P48 1450 aa34.26■■■■□ 3.07
GGA1-214ENST00000449944 SNAPC4Q5SXM2 1469 aa34.23■■■■□ 3.07
GGA1-214ENST00000449944 CUX1P39880 1505 aa34.23■■■■□ 3.07
GGA1-214ENST00000449944 WDR97A6NE52 1622 aa34.18■■■■□ 3.06
GGA1-214ENST00000449944 CHMP7Q8WUX9 453 aaPredicted RBP34.13■■■■□ 3.05
GGA1-214ENST00000449944 TRHP20396 242 aaPredicted RBP34.11■■■■□ 3.05
GGA1-214ENST00000449944 MAGI1Q96QZ7 1491 aaPredicted RBP34.09■■■■□ 3.05
GGA1-214ENST00000449944 GRIN2BQ13224 1484 aa34.08■■■■□ 3.05
GGA1-214ENST00000449944 CLASP1Q7Z460 1538 aa34.08■■■■□ 3.05
GGA1-214ENST00000449944 SYNJ1O43426 1573 aa34.06■■■■□ 3.04
GGA1-214ENST00000449944 SYNJ2O15056 1496 aa34■■■■□ 3.03
GGA1-214ENST00000449944 PBRM1Q86U86 1689 aa33.96■■■■□ 3.03
GGA1-214ENST00000449944 GAPVD1Q14C86 1478 aa33.95■■■■□ 3.03
GGA1-214ENST00000449944 SUPT5HO00267 1087 aaKnown RBP33.95■■■■□ 3.03
GGA1-214ENST00000449944 ABCA10Q8WWZ4 1543 aa33.86■■■■□ 3.01
GGA1-214ENST00000449944 ABCA5Q8WWZ7 1642 aa33.84■■■■□ 3.01
GGA1-214ENST00000449944 WRNQ14191 1432 aaPredicted RBP eCLIP33.7■■■□□ 2.99
GGA1-214ENST00000449944 GRIN2AQ12879 1464 aa33.66■■■□□ 2.98
GGA1-214ENST00000449944 TOP2BQ02880 1626 aa33.61■■■□□ 2.97
GGA1-214ENST00000449944 BIVM-ERCC5R4GMW8 1640 aa33.61■■■□□ 2.97
GGA1-214ENST00000449944 ADAMTS12P58397 1594 aa33.61■■■□□ 2.97
GGA1-214ENST00000449944 ERCC6L2Q5T890 1561 aa33.57■■■□□ 2.96
GGA1-214ENST00000449944 CEP170Q5SW79 1584 aa33.55■■■□□ 2.96
GGA1-214ENST00000449944 NUP160Q12769 1436 aa33.53■■■□□ 2.96
GGA1-214ENST00000449944 FHAD1B1AJZ9 1412 aa33.5■■■□□ 2.95
GGA1-214ENST00000449944 ERICH3Q5RHP9 1530 aa33.43■■■□□ 2.94
GGA1-214ENST00000449944 SHROOM2Q13796 1616 aa33.4■■■□□ 2.94
GGA1-214ENST00000449944 AEBP2Q6ZN18 517 aaPredicted RBP33.27■■■□□ 2.92
GGA1-214ENST00000449944 PRG4Q92954 1404 aaPredicted RBP33.26■■■□□ 2.91
GGA1-214ENST00000449944 JPH4Q96JJ6 628 aa33.21■■■□□ 2.91
GGA1-214ENST00000449944 RUSC2Q8N2Y8 1516 aa33.15■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms