RNA–Protein interactions for RNA: ENST00000619482.1

ZNHIT3-207, Transcript of zinc finger HIT-type containing 3, humanhuman

TSL 2

Gene ZNHIT3, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNHIT3-207ENST00000619482 NISCHQ9Y2I1 1504 aa43.21■■■■■ 4.51
ZNHIT3-207ENST00000619482 CCDC180Q9P1Z9 1646 aa38.56■■■■□ 3.76
ZNHIT3-207ENST00000619482 ABCC9O60706 1549 aa37.86■■■■□ 3.65
ZNHIT3-207ENST00000619482 RB1CC1Q8TDY2 1594 aa36.42■■■■□ 3.42
ZNHIT3-207ENST00000619482 NACADO15069 1562 aa36.32■■■■□ 3.4
ZNHIT3-207ENST00000619482 DCAF8L2P0C7V8 631 aa36.27■■■■□ 3.4
ZNHIT3-207ENST00000619482 MYO15BQ96JP2 1530 aa36.03■■■■□ 3.36
ZNHIT3-207ENST00000619482 ZCCHC6Q5VYS8 1495 aaKnown RBP35.92■■■■□ 3.34
ZNHIT3-207ENST00000619482 DCAF1Q9Y4B6 1507 aa35.78■■■■□ 3.32
ZNHIT3-207ENST00000619482 UNC13AQ9UPW8 1703 aa35.49■■■■□ 3.27
ZNHIT3-207ENST00000619482 PABPN1Q86U42 306 aaKnown RBP eCLIP35.33■■■■□ 3.25
ZNHIT3-207ENST00000619482 BICRAQ9NZM4 1560 aa35.18■■■■□ 3.22
ZNHIT3-207ENST00000619482 SCRIBQ14160 1630 aa35.1■■■■□ 3.21
ZNHIT3-207ENST00000619482 SHROOM4Q9ULL8 1493 aa34.96■■■■□ 3.19
ZNHIT3-207ENST00000619482 DNAJC5BQ9UF47 199 aa34.85■■■■□ 3.17
ZNHIT3-207ENST00000619482 EIF4G1Q04637 1599 aaKnown RBP34.34■■■■□ 3.09
ZNHIT3-207ENST00000619482 CC2D2AQ9P2K1 1620 aa34.26■■■■□ 3.07
ZNHIT3-207ENST00000619482 CECR2Q9BXF3 1484 aa34.07■■■■□ 3.05
ZNHIT3-207ENST00000619482 SMARCA4P51532 1647 aa33.57■■■□□ 2.97
ZNHIT3-207ENST00000619482 BAZ1AQ9NRL2 1556 aaPredicted RBP33.55■■■□□ 2.96
ZNHIT3-207ENST00000619482 NCAPD3P42695 1498 aa33.48■■■□□ 2.95
ZNHIT3-207ENST00000619482 SMARCA2P51531 1590 aa33.46■■■□□ 2.95
ZNHIT3-207ENST00000619482 ATAD2BQ9ULI0 1458 aa33.44■■■□□ 2.94
ZNHIT3-207ENST00000619482 HMGXB3Q12766 1538 aa33.3■■■□□ 2.92
ZNHIT3-207ENST00000619482 PEG3Q9GZU2 1588 aa33.26■■■□□ 2.91
ZNHIT3-207ENST00000619482 MROH2BQ7Z745 1585 aa33.25■■■□□ 2.91
ZNHIT3-207ENST00000619482 BAZ1BQ9UIG0 1483 aaKnown RBP33.2■■■□□ 2.91
ZNHIT3-207ENST00000619482 WIZO95785 1651 aa32.9■■■□□ 2.86
ZNHIT3-207ENST00000619482 RSF1Q96T23 1441 aaPredicted RBP32.81■■■□□ 2.84
ZNHIT3-207ENST00000619482 ERCC6Q03468 1493 aa32.74■■■□□ 2.83
ZNHIT3-207ENST00000619482 LAMC3Q9Y6N6 1575 aa32.66■■■□□ 2.82
ZNHIT3-207ENST00000619482 NESP48681 1621 aa32.66■■■□□ 2.82
ZNHIT3-207ENST00000619482 TOP2AP11388 1531 aaKnown RBP32.57■■■□□ 2.8
ZNHIT3-207ENST00000619482 CADPSQ9ULU8 1353 aa32.51■■■□□ 2.79
ZNHIT3-207ENST00000619482 PDS5BQ9NTI5 1447 aa32.49■■■□□ 2.79
ZNHIT3-207ENST00000619482 CUX2O14529 1486 aa32.46■■■□□ 2.79
ZNHIT3-207ENST00000619482 KIF21AQ7Z4S6 1674 aa32.31■■■□□ 2.76
ZNHIT3-207ENST00000619482 CFTRP13569 1480 aa32.24■■■□□ 2.75
ZNHIT3-207ENST00000619482 THOC2Q8NI27 1593 aaKnown RBP32.24■■■□□ 2.75
ZNHIT3-207ENST00000619482 CCDC88BA6NC98 1476 aa32.17■■■□□ 2.74
ZNHIT3-207ENST00000619482 CEP164Q9UPV0 1460 aa32.13■■■□□ 2.73
ZNHIT3-207ENST00000619482 FANCD2Q9BXW9 1451 aa32.12■■■□□ 2.73
ZNHIT3-207ENST00000619482 MRC2Q9UBG0 1479 aa32.1■■■□□ 2.73
ZNHIT3-207ENST00000619482 PRDM2Q13029 1718 aa32.03■■■□□ 2.72
ZNHIT3-207ENST00000619482 WDR62O43379 1518 aa31.98■■■□□ 2.71
ZNHIT3-207ENST00000619482 SUPT5HO00267 1087 aaKnown RBP31.89■■■□□ 2.7
ZNHIT3-207ENST00000619482 URB2Q14146 1524 aaKnown RBP31.75■■■□□ 2.67
ZNHIT3-207ENST00000619482 DNAJC5Q9H3Z4 198 aa31.68■■■□□ 2.66
ZNHIT3-207ENST00000619482 ABCC8Q09428 1581 aa31.67■■■□□ 2.66
ZNHIT3-207ENST00000619482 TOPBP1Q92547 1522 aa31.57■■■□□ 2.64
ZNHIT3-207ENST00000619482 DNMBPQ6XZF7 1577 aa31.53■■■□□ 2.64
ZNHIT3-207ENST00000619482 IFT140Q96RY7 1462 aa31.47■■■□□ 2.63
ZNHIT3-207ENST00000619482 POLA1P09884 1462 aaPredicted RBP31.27■■■□□ 2.6
ZNHIT3-207ENST00000619482 ZNF608Q9ULD9 1512 aaPredicted RBP31.24■■■□□ 2.59
ZNHIT3-207ENST00000619482 CUX1P39880 1505 aa31.21■■■□□ 2.59
ZNHIT3-207ENST00000619482 TARBP1Q13395 1621 aaKnown RBP31.2■■■□□ 2.59
ZNHIT3-207ENST00000619482 SOGA1O94964 1423 aa31.2■■■□□ 2.59
ZNHIT3-207ENST00000619482 FGD5Q6ZNL6 1462 aa31.18■■■□□ 2.58
ZNHIT3-207ENST00000619482 EIF4G3O43432 1585 aaKnown RBP31.15■■■□□ 2.58
ZNHIT3-207ENST00000619482 OSCARQ8IYS5 282 aa31.12■■■□□ 2.57
ZNHIT3-207ENST00000619482 RAD54L2Q9Y4B4 1467 aa31.12■■■□□ 2.57
ZNHIT3-207ENST00000619482 AQRO60306 1485 aaKnown RBP eCLIP31.08■■■□□ 2.573e-6■■□□□ 12.1
ZNHIT3-207ENST00000619482 WDR97A6NE52 1622 aa31.06■■■□□ 2.56
ZNHIT3-207ENST00000619482 WRNQ14191 1432 aaPredicted RBP eCLIP31■■■□□ 2.55
ZNHIT3-207ENST00000619482 TDRD9Q8NDG6 1382 aaKnown RBP31■■■□□ 2.55
ZNHIT3-207ENST00000619482 TOP2BQ02880 1626 aa30.94■■■□□ 2.54
ZNHIT3-207ENST00000619482 BIVM-ERCC5R4GMW8 1640 aa30.94■■■□□ 2.54
ZNHIT3-207ENST00000619482 ABCA10Q8WWZ4 1543 aa30.88■■■□□ 2.53
ZNHIT3-207ENST00000619482 GRIN2BQ13224 1484 aa30.86■■■□□ 2.53
ZNHIT3-207ENST00000619482 SYNJ1O43426 1573 aa30.86■■■□□ 2.53
ZNHIT3-207ENST00000619482 FBLN2P98095 1184 aa30.84■■■□□ 2.53
ZNHIT3-207ENST00000619482 GAPVD1Q14C86 1478 aa30.82■■■□□ 2.53
ZNHIT3-207ENST00000619482 CHD1O14646 1710 aa30.81■■■□□ 2.52
ZNHIT3-207ENST00000619482 MAGI1Q96QZ7 1491 aaPredicted RBP30.81■■■□□ 2.52
ZNHIT3-207ENST00000619482 SNAPC4Q5SXM2 1469 aa30.8■■■□□ 2.52
ZNHIT3-207ENST00000619482 PBRM1Q86U86 1689 aa30.76■■■□□ 2.51
ZNHIT3-207ENST00000619482 ABCA5Q8WWZ7 1642 aa30.75■■■□□ 2.51
ZNHIT3-207ENST00000619482 CHMP7Q8WUX9 453 aaPredicted RBP30.74■■■□□ 2.51
ZNHIT3-207ENST00000619482 SYNJ2O15056 1496 aa30.67■■■□□ 2.5
ZNHIT3-207ENST00000619482 TRIM41Q8WV44 630 aa30.56■■■□□ 2.48
ZNHIT3-207ENST00000619482 ERICH3Q5RHP9 1530 aa30.54■■■□□ 2.48
ZNHIT3-207ENST00000619482 RIMBP3CA6NJZ7 1639 aa30.54■■■□□ 2.48
ZNHIT3-207ENST00000619482 RIMBP3BA6NNM3 1639 aa30.54■■■□□ 2.48
ZNHIT3-207ENST00000619482 RIMBP3Q9UFD9 1639 aa30.54■■■□□ 2.48
ZNHIT3-207ENST00000619482 ARHGEF11O15085 1522 aa30.52■■■□□ 2.48
ZNHIT3-207ENST00000619482 FHAD1B1AJZ9 1412 aa30.47■■■□□ 2.47
ZNHIT3-207ENST00000619482 ADAMTS12P58397 1594 aa30.47■■■□□ 2.47
ZNHIT3-207ENST00000619482 CLASP1Q7Z460 1538 aa30.45■■■□□ 2.47
ZNHIT3-207ENST00000619482 GRIN2AQ12879 1464 aa30.44■■■□□ 2.46
ZNHIT3-207ENST00000619482 KIF27Q86VH2 1401 aa30.41■■■□□ 2.46
ZNHIT3-207ENST00000619482 CYB5RLQ6IPT4 315 aa30.3■■■□□ 2.44
ZNHIT3-207ENST00000619482 NUP160Q12769 1436 aa30.29■■■□□ 2.44
ZNHIT3-207ENST00000619482 IGF1RP08069 1367 aa30.25■■■□□ 2.43
ZNHIT3-207ENST00000619482 CUL7Q14999 1698 aa30.24■■■□□ 2.43
ZNHIT3-207ENST00000619482 CEP170Q5SW79 1584 aa30.24■■■□□ 2.43
ZNHIT3-207ENST00000619482 ARAP1Q96P48 1450 aa30.23■■■□□ 2.43
ZNHIT3-207ENST00000619482 CARMIL1Q5VZK9 1371 aa30.11■■■□□ 2.41
ZNHIT3-207ENST00000619482 SHROOM2Q13796 1616 aa30.08■■■□□ 2.41
ZNHIT3-207ENST00000619482 JPH4Q96JJ6 628 aa30.04■■■□□ 2.4
ZNHIT3-207ENST00000619482 RUSC2Q8N2Y8 1516 aa30.01■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms