RNA–Protein interactions for RNA: ENST00000346785.9

SLC41A3-202, Transcript of solute carrier family 41 member 3, humanhuman

TSL 2 BASIC

Gene SLC41A3, Length 1,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC41A3-202ENST00000346785 NISCHQ9Y2I1 1504 aa49.07■■■■■ 5.45
SLC41A3-202ENST00000346785 CCDC180Q9P1Z9 1646 aa42.98■■■■■ 4.47
SLC41A3-202ENST00000346785 ZCCHC6Q5VYS8 1495 aaKnown RBP41.22■■■■■ 4.19
SLC41A3-202ENST00000346785 DCAF1Q9Y4B6 1507 aa40.72■■■■■ 4.11
SLC41A3-202ENST00000346785 ABCC9O60706 1549 aa40.46■■■■■ 4.07
SLC41A3-202ENST00000346785 DCAF8L2P0C7V8 631 aa40.34■■■■■ 4.05
SLC41A3-202ENST00000346785 MYO15BQ96JP2 1530 aa40.32■■■■■ 4.04
SLC41A3-202ENST00000346785 NACADO15069 1562 aa40.02■■■■■ 4
SLC41A3-202ENST00000346785 SHROOM4Q9ULL8 1493 aa39.7■■■■□ 3.95
SLC41A3-202ENST00000346785 RB1CC1Q8TDY2 1594 aa39.68■■■■□ 3.94
SLC41A3-202ENST00000346785 SCRIBQ14160 1630 aa39.29■■■■□ 3.88
SLC41A3-202ENST00000346785 UNC13AQ9UPW8 1703 aa38.76■■■■□ 3.8
SLC41A3-202ENST00000346785 BICRAQ9NZM4 1560 aa38.35■■■■□ 3.73
SLC41A3-202ENST00000346785 SUPT5HO00267 1087 aaKnown RBP38.2■■■■□ 3.71
SLC41A3-202ENST00000346785 PABPN1Q86U42 306 aaKnown RBP eCLIP38.05■■■■□ 3.68
SLC41A3-202ENST00000346785 CECR2Q9BXF3 1484 aa38■■■■□ 3.67
SLC41A3-202ENST00000346785 RSF1Q96T23 1441 aaPredicted RBP37.97■■■■□ 3.67
SLC41A3-202ENST00000346785 BAZ1AQ9NRL2 1556 aaPredicted RBP37.97■■■■□ 3.67
SLC41A3-202ENST00000346785 MROH2BQ7Z745 1585 aa37.82■■■■□ 3.65
SLC41A3-202ENST00000346785 SMARCA4P51532 1647 aa37.75■■■■□ 3.63
SLC41A3-202ENST00000346785 WIZO95785 1651 aa37.5■■■■□ 3.59
SLC41A3-202ENST00000346785 PEG3Q9GZU2 1588 aa37.38■■■■□ 3.57
SLC41A3-202ENST00000346785 EIF4G1Q04637 1599 aaKnown RBP37.25■■■■□ 3.55
SLC41A3-202ENST00000346785 TOP2AP11388 1531 aaKnown RBP37.23■■■■□ 3.55
SLC41A3-202ENST00000346785 SMARCA2P51531 1590 aa37.22■■■■□ 3.55
SLC41A3-202ENST00000346785 ATAD2BQ9ULI0 1458 aa37.13■■■■□ 3.53
SLC41A3-202ENST00000346785 BAZ1BQ9UIG0 1483 aaKnown RBP36.94■■■■□ 3.5
SLC41A3-202ENST00000346785 NCAPD3P42695 1498 aa36.88■■■■□ 3.5
SLC41A3-202ENST00000346785 HMGXB3Q12766 1538 aa36.88■■■■□ 3.49
SLC41A3-202ENST00000346785 CCDC88BA6NC98 1476 aa36.76■■■■□ 3.48
SLC41A3-202ENST00000346785 CC2D2AQ9P2K1 1620 aa36.7■■■■□ 3.47
SLC41A3-202ENST00000346785 CHIC1Q5VXU3 224 aa36.64■■■■□ 3.46
SLC41A3-202ENST00000346785 TRIM41Q8WV44 630 aa36.05■■■■□ 3.36
SLC41A3-202ENST00000346785 CFTRP13569 1480 aa36.02■■■■□ 3.36
SLC41A3-202ENST00000346785 PRDM2Q13029 1718 aa35.93■■■■□ 3.34
SLC41A3-202ENST00000346785 CADPSQ9ULU8 1353 aa35.9■■■■□ 3.34
SLC41A3-202ENST00000346785 ABCC8Q09428 1581 aa35.89■■■■□ 3.34
SLC41A3-202ENST00000346785 WRNQ14191 1432 aaPredicted RBP eCLIP35.79■■■■□ 3.32
SLC41A3-202ENST00000346785 LAMC3Q9Y6N6 1575 aa35.7■■■■□ 3.31
SLC41A3-202ENST00000346785 DNAJC5BQ9UF47 199 aa35.62■■■■□ 3.29
SLC41A3-202ENST00000346785 SYNJ1O43426 1573 aa35.59■■■■□ 3.29
SLC41A3-202ENST00000346785 TOP2BQ02880 1626 aa35.56■■■■□ 3.28
SLC41A3-202ENST00000346785 BIVM-ERCC5R4GMW8 1640 aa35.54■■■■□ 3.28
SLC41A3-202ENST00000346785 FANCD2Q9BXW9 1451 aa35.49■■■■□ 3.27
SLC41A3-202ENST00000346785 NESP48681 1621 aa35.46■■■■□ 3.27
SLC41A3-202ENST00000346785 PDS5BQ9NTI5 1447 aa35.4■■■■□ 3.26
SLC41A3-202ENST00000346785 CUX1P39880 1505 aa35.39■■■■□ 3.26
SLC41A3-202ENST00000346785 EEA1Q15075 1411 aa35.37■■■■□ 3.25
SLC41A3-202ENST00000346785 CEP164Q9UPV0 1460 aa35.31■■■■□ 3.24
SLC41A3-202ENST00000346785 FAM9AQ8IZU1 332 aaPredicted RBP35.21■■■■□ 3.23
SLC41A3-202ENST00000346785 DNMBPQ6XZF7 1577 aa35.21■■■■□ 3.23
SLC41A3-202ENST00000346785 SOGA1O94964 1423 aa35.19■■■■□ 3.22
SLC41A3-202ENST00000346785 LOC105371045A0A1W2PR82 267 aa35.14■■■■□ 3.22
SLC41A3-202ENST00000346785 KIF21AQ7Z4S6 1674 aa35.14■■■■□ 3.22
SLC41A3-202ENST00000346785 TOPBP1Q92547 1522 aa35.09■■■■□ 3.21
SLC41A3-202ENST00000346785 FGD5Q6ZNL6 1462 aa35.04■■■■□ 3.2
SLC41A3-202ENST00000346785 RUSC2Q8N2Y8 1516 aa35.01■■■■□ 3.2
SLC41A3-202ENST00000346785 CSRNP3Q8WYN3 585 aa35.01■■■■□ 3.2
SLC41A3-202ENST00000346785 URB2Q14146 1524 aaKnown RBP35■■■■□ 3.19
SLC41A3-202ENST00000346785 KIF27Q86VH2 1401 aa34.94■■■■□ 3.18
SLC41A3-202ENST00000346785 MRC2Q9UBG0 1479 aa34.92■■■■□ 3.18
SLC41A3-202ENST00000346785 POLA1P09884 1462 aaPredicted RBP34.9■■■■□ 3.18
SLC41A3-202ENST00000346785 KIF21BO75037 1637 aa34.84■■■■□ 3.17
SLC41A3-202ENST00000346785 ABCA10Q8WWZ4 1543 aa34.8■■■■□ 3.16
SLC41A3-202ENST00000346785 ERCC6Q03468 1493 aa34.8■■■■□ 3.16
SLC41A3-202ENST00000346785 CUX2O14529 1486 aa34.8■■■■□ 3.16
SLC41A3-202ENST00000346785 GOLGA3Q08378 1498 aa34.78■■■■□ 3.16
SLC41A3-202ENST00000346785 WDR62O43379 1518 aa34.74■■■■□ 3.15
SLC41A3-202ENST00000346785 RAD54L2Q9Y4B4 1467 aa34.69■■■■□ 3.14
SLC41A3-202ENST00000346785 WDR97A6NE52 1622 aa34.69■■■■□ 3.14
SLC41A3-202ENST00000346785 ERICH3Q5RHP9 1530 aa34.66■■■■□ 3.14
SLC41A3-202ENST00000346785 PRXQ9BXM0 1461 aa34.64■■■■□ 3.14
SLC41A3-202ENST00000346785 TNIKQ9UKE5 1360 aa34.64■■■■□ 3.14
SLC41A3-202ENST00000346785 THOC2Q8NI27 1593 aaKnown RBP34.63■■■■□ 3.13
SLC41A3-202ENST00000346785 EHMT2Q96KQ7 1210 aa34.61■■■■□ 3.13
SLC41A3-202ENST00000346785 TARBP1Q13395 1621 aaKnown RBP34.58■■■■□ 3.13
SLC41A3-202ENST00000346785 IGF1RP08069 1367 aa34.55■■■■□ 3.12
SLC41A3-202ENST00000346785 RAPGEF2Q9Y4G8 1499 aa34.52■■■■□ 3.12
SLC41A3-202ENST00000346785 UBTFP17480 764 aaKnown RBP34.52■■■■□ 3.12
SLC41A3-202ENST00000346785 ABCA5Q8WWZ7 1642 aa34.51■■■■□ 3.12
SLC41A3-202ENST00000346785 IFT140Q96RY7 1462 aa34.5■■■■□ 3.11
SLC41A3-202ENST00000346785 CUL7Q14999 1698 aa34.44■■■■□ 3.1
SLC41A3-202ENST00000346785 GAPVD1Q14C86 1478 aa34.42■■■■□ 3.1
SLC41A3-202ENST00000346785 CARMIL1Q5VZK9 1371 aa34.41■■■■□ 3.1
SLC41A3-202ENST00000346785 CEP162Q5TB80 1403 aa34.39■■■■□ 3.1
SLC41A3-202ENST00000346785 TDRD9Q8NDG6 1382 aaKnown RBP34.36■■■■□ 3.09
SLC41A3-202ENST00000346785 PBRM1Q86U86 1689 aa34.26■■■■□ 3.08
SLC41A3-202ENST00000346785 GRIN2BQ13224 1484 aa34.21■■■■□ 3.07
SLC41A3-202ENST00000346785 AQRO60306 1485 aaKnown RBP eCLIP34.17■■■■□ 3.063e-7■■■■■ 30.5
SLC41A3-202ENST00000346785 CLIP1P30622 1438 aa34.16■■■■□ 3.06
SLC41A3-202ENST00000346785 ZNF608Q9ULD9 1512 aaPredicted RBP34.14■■■■□ 3.06
SLC41A3-202ENST00000346785 EIF4G3O43432 1585 aaKnown RBP34.14■■■■□ 3.06
SLC41A3-202ENST00000346785 FHAD1B1AJZ9 1412 aa34.09■■■■□ 3.05
SLC41A3-202ENST00000346785 ADAMTS12P58397 1594 aa34.07■■■■□ 3.04
SLC41A3-202ENST00000346785 CTTNBP2Q8WZ74 1663 aa34■■■■□ 3.03
SLC41A3-202ENST00000346785 MAGI1Q96QZ7 1491 aaPredicted RBP33.96■■■■□ 3.03
SLC41A3-202ENST00000346785 SNAPC4Q5SXM2 1469 aa33.91■■■■□ 3.02
SLC41A3-202ENST00000346785 VPS8Q8N3P4 1428 aa33.88■■■■□ 3.01
SLC41A3-202ENST00000346785 TRIM26Q12899 539 aaPredicted RBP33.84■■■■□ 3.01
SLC41A3-202ENST00000346785 ARHGAP35Q9NRY4 1499 aa33.83■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms