RNA–Protein interactions for RNA: ENST00000338448.9

PALM-202, Transcript of paralemmin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PALM, Length 2,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALM-202ENST00000338448 NISCHQ9Y2I1 1504 aa40.42■■■■■ 4.06
PALM-202ENST00000338448 SHROOM4Q9ULL8 1493 aa35.5■■■■□ 3.27
PALM-202ENST00000338448 SUPT5HO00267 1087 aaKnown RBP35.18■■■■□ 3.22
PALM-202ENST00000338448 HRCP23327 699 aa34.55■■■■□ 3.12
PALM-202ENST00000338448 MYO15BQ96JP2 1530 aa34.4■■■■□ 3.1
PALM-202ENST00000338448 CHIC1Q5VXU3 224 aa34.35■■■■□ 3.09
PALM-202ENST00000338448 ZCCHC6Q5VYS8 1495 aaKnown RBP34.28■■■■□ 3.08
PALM-202ENST00000338448 PCGF6Q9BYE7 350 aa34.22■■■■□ 3.07
PALM-202ENST00000338448 PPARGC1BQ86YN6 1023 aaKnown RBP33.95■■■■□ 3.03
PALM-202ENST00000338448 DCAF8L2P0C7V8 631 aa33.92■■■■□ 3.02
PALM-202ENST00000338448 CCDC180Q9P1Z9 1646 aa33.77■■■■□ 3
PALM-202ENST00000338448 LOC105371045A0A1W2PR82 267 aa33.57■■■□□ 2.96
PALM-202ENST00000338448 DCAF1Q9Y4B6 1507 aa33.47■■■□□ 2.95
PALM-202ENST00000338448 TRIM26Q12899 539 aaPredicted RBP33.2■■■□□ 2.9
PALM-202ENST00000338448 ZEB1P37275 1124 aaPredicted RBP32.7■■■□□ 2.83
PALM-202ENST00000338448 TRIM41Q8WV44 630 aa32.56■■■□□ 2.8
PALM-202ENST00000338448 FAM9AQ8IZU1 332 aaPredicted RBP32.56■■■□□ 2.8
PALM-202ENST00000338448 ABCC9O60706 1549 aa32.47■■■□□ 2.79
PALM-202ENST00000338448 EHMT2Q96KQ7 1210 aa32.44■■■□□ 2.78
PALM-202ENST00000338448 PELP1Q8IZL8 1130 aaKnown RBP32.4■■■□□ 2.78
PALM-202ENST00000338448 SCAF1Q9H7N4 1312 aaKnown RBP32.4■■■□□ 2.78
PALM-202ENST00000338448 RSF1Q96T23 1441 aaPredicted RBP32.37■■■□□ 2.77
PALM-202ENST00000338448 SCRIBQ14160 1630 aa32.17■■■□□ 2.74
PALM-202ENST00000338448 RB1CC1Q8TDY2 1594 aa32.16■■■□□ 2.74
PALM-202ENST00000338448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.92■■■□□ 2.7
PALM-202ENST00000338448 CCER1Q8TC90 406 aaPredicted RBP31.83■■■□□ 2.69
PALM-202ENST00000338448 ACIN1Q9UKV3 1341 aaKnown RBP31.77■■■□□ 2.68
PALM-202ENST00000338448 NEUROD1Q13562 356 aa31.75■■■□□ 2.67
PALM-202ENST00000338448 CECR2Q9BXF3 1484 aa31.68■■■□□ 2.66
PALM-202ENST00000338448 DIEXFQ68CQ4 756 aaKnown RBP31.58■■■□□ 2.65
PALM-202ENST00000338448 MROH2BQ7Z745 1585 aa31.57■■■□□ 2.64
PALM-202ENST00000338448 TTBK1Q5TCY1 1321 aaPredicted RBP31.55■■■□□ 2.64
PALM-202ENST00000338448 GTF3C3Q9Y5Q9 886 aa31.53■■■□□ 2.64
PALM-202ENST00000338448 CENPBP07199 599 aaPredicted RBP31.46■■■□□ 2.63
PALM-202ENST00000338448 WIZO95785 1651 aa31.46■■■□□ 2.63
PALM-202ENST00000338448 NACADO15069 1562 aa31.17■■■□□ 2.58
PALM-202ENST00000338448 BAZ1AQ9NRL2 1556 aaPredicted RBP31.14■■■□□ 2.58
PALM-202ENST00000338448 EIF4G1Q04637 1599 aaKnown RBP31.13■■■□□ 2.57
PALM-202ENST00000338448 WRNQ14191 1432 aaPredicted RBP eCLIP31.13■■■□□ 2.57
PALM-202ENST00000338448 CEP162Q5TB80 1403 aa31.13■■■□□ 2.57
PALM-202ENST00000338448 ABCC8Q09428 1581 aa31.11■■■□□ 2.57
PALM-202ENST00000338448 CCDC88BA6NC98 1476 aa31.1■■■□□ 2.57
PALM-202ENST00000338448 ZNF316A6NFI3 1004 aaPredicted RBP31.09■■■□□ 2.57
PALM-202ENST00000338448 YTHDC1Q96MU7 727 aaKnown RBP31.07■■■□□ 2.56
PALM-202ENST00000338448 SOGA1O94964 1423 aa30.99■■■□□ 2.55
PALM-202ENST00000338448 UBTFP17480 764 aaKnown RBP30.98■■■□□ 2.55
PALM-202ENST00000338448 TNIKQ9UKE5 1360 aa30.94■■■□□ 2.54
PALM-202ENST00000338448 MYT1Q01538 1121 aa30.92■■■□□ 2.54
PALM-202ENST00000338448 CSRNP3Q8WYN3 585 aa30.88■■■□□ 2.53
PALM-202ENST00000338448 MIER1Q8N108 512 aa30.84■■■□□ 2.53
PALM-202ENST00000338448 RUSC2Q8N2Y8 1516 aa30.82■■■□□ 2.52
PALM-202ENST00000338448 TOP2AP11388 1531 aaKnown RBP30.81■■■□□ 2.52
PALM-202ENST00000338448 HNRNPUL2Q1KMD3 747 aaKnown RBP30.81■■■□□ 2.52
PALM-202ENST00000338448 SMARCA2P51531 1590 aa30.72■■■□□ 2.51
PALM-202ENST00000338448 EEA1Q15075 1411 aa30.67■■■□□ 2.5
PALM-202ENST00000338448 GOLGA3Q08378 1498 aa30.62■■■□□ 2.49
PALM-202ENST00000338448 SMARCA4P51532 1647 aa30.61■■■□□ 2.49
PALM-202ENST00000338448 RANGAP1P46060 587 aaPredicted RBP30.41■■■□□ 2.46
PALM-202ENST00000338448 APLP2Q06481 763 aa30.4■■■□□ 2.46
PALM-202ENST00000338448 CLIP1P30622 1438 aa30.4■■■□□ 2.46
PALM-202ENST00000338448 CEP164Q9UPV0 1460 aa30.35■■■□□ 2.45
PALM-202ENST00000338448 VPS8Q8N3P4 1428 aa30.29■■■□□ 2.44
PALM-202ENST00000338448 KIF21BO75037 1637 aa30.22■■■□□ 2.43
PALM-202ENST00000338448 SYNJ1O43426 1573 aa30.2■■■□□ 2.42
PALM-202ENST00000338448 UNC13AQ9UPW8 1703 aa30.16■■■□□ 2.42
PALM-202ENST00000338448 RAPGEF2Q9Y4G8 1499 aa30.15■■■□□ 2.42
PALM-202ENST00000338448 PABPN1Q86U42 306 aaKnown RBP eCLIP30.14■■■□□ 2.41
PALM-202ENST00000338448 SUPT16HQ9Y5B9 1047 aaKnown RBP30.11■■■□□ 2.41
PALM-202ENST00000338448 DHX57Q6P158 1386 aaKnown RBP30.06■■■□□ 2.4
PALM-202ENST00000338448 BAZ1BQ9UIG0 1483 aaKnown RBP30.05■■■□□ 2.4
PALM-202ENST00000338448 CLSPNQ9HAW4 1339 aa30■■■□□ 2.39
PALM-202ENST00000338448 KANK4Q5T7N3 995 aaPredicted RBP29.92■■■□□ 2.38
PALM-202ENST00000338448 TSHZ2Q9NRE2 1034 aa29.83■■■□□ 2.37
PALM-202ENST00000338448 PEG3Q9GZU2 1588 aa29.82■■■□□ 2.36
PALM-202ENST00000338448 ITGAEP38570 1179 aa29.77■■■□□ 2.36
PALM-202ENST00000338448 BICRAQ9NZM4 1560 aa29.76■■■□□ 2.36
PALM-202ENST00000338448 KCNH8Q96L42 1107 aa29.76■■■□□ 2.36
PALM-202ENST00000338448 ARAP1Q96P48 1450 aa29.75■■■□□ 2.35
PALM-202ENST00000338448 ATAD2BQ9ULI0 1458 aa29.71■■■□□ 2.35
PALM-202ENST00000338448 TOP2BQ02880 1626 aa29.66■■■□□ 2.34
PALM-202ENST00000338448 RRBP1Q9P2E9 1410 aaKnown RBP29.65■■■□□ 2.34
PALM-202ENST00000338448 BCANQ96GW7 911 aa29.65■■■□□ 2.34
PALM-202ENST00000338448 PRXQ9BXM0 1461 aa29.62■■■□□ 2.33
PALM-202ENST00000338448 CCNB3Q8WWL7 1395 aa29.6■■■□□ 2.33
PALM-202ENST00000338448 ANP32EQ9BTT0 268 aa29.59■■■□□ 2.33
PALM-202ENST00000338448 ERICH3Q5RHP9 1530 aa29.59■■■□□ 2.33
PALM-202ENST00000338448 CUX2O14529 1486 aa29.52■■■□□ 2.32
PALM-202ENST00000338448 FKBP8Q14318 412 aa29.5■■■□□ 2.31
PALM-202ENST00000338448 DDX10Q13206 875 aaKnown RBP29.49■■■□□ 2.31
PALM-202ENST00000338448 RAB3GAP2Q9H2M9 1393 aa29.48■■■□□ 2.31
PALM-202ENST00000338448 BIVM-ERCC5R4GMW8 1640 aa29.46■■■□□ 2.31
PALM-202ENST00000338448 ARHGAP35Q9NRY4 1499 aa29.39■■■□□ 2.3
PALM-202ENST00000338448 MAPKBP1O60336 1514 aa29.39■■■□□ 2.29
PALM-202ENST00000338448 SIN3AQ96ST3 1273 aa29.38■■■□□ 2.29
PALM-202ENST00000338448 KIF27Q86VH2 1401 aa29.38■■■□□ 2.29
PALM-202ENST00000338448 HIRIP3Q9BW71 556 aaPredicted RBP29.32■■■□□ 2.28
PALM-202ENST00000338448 CUX1P39880 1505 aa29.31■■■□□ 2.28
PALM-202ENST00000338448 WDR97A6NE52 1622 aa29.29■■■□□ 2.28
PALM-202ENST00000338448 SETD5Q9C0A6 1442 aa29.28■■■□□ 2.28
PALM-202ENST00000338448 TRIM52Q96A61 297 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms