RNA–Protein interactions for RNA: ENST00000598780.5

UBA52-210, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene UBA52, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-210ENST00000598780 NISCHQ9Y2I1 1504 aa45.6■■■■■ 4.89
UBA52-210ENST00000598780 CCDC180Q9P1Z9 1646 aa40.67■■■■■ 4.1
UBA52-210ENST00000598780 ABCC9O60706 1549 aa40.16■■■■■ 4.02
UBA52-210ENST00000598780 RB1CC1Q8TDY2 1594 aa38.46■■■■□ 3.75
UBA52-210ENST00000598780 NACADO15069 1562 aa38.31■■■■□ 3.72
UBA52-210ENST00000598780 DCAF8L2P0C7V8 631 aa38.28■■■■□ 3.72
UBA52-210ENST00000598780 MYO15BQ96JP2 1530 aa37.96■■■■□ 3.67
UBA52-210ENST00000598780 ZCCHC6Q5VYS8 1495 aaKnown RBP37.94■■■■□ 3.66
UBA52-210ENST00000598780 DCAF1Q9Y4B6 1507 aa37.69■■■■□ 3.62
UBA52-210ENST00000598780 UNC13AQ9UPW8 1703 aa37.47■■■■□ 3.59
UBA52-210ENST00000598780 PABPN1Q86U42 306 aaKnown RBP eCLIP37.45■■■■□ 3.59
UBA52-210ENST00000598780 BICRAQ9NZM4 1560 aa37.26■■■■□ 3.56
UBA52-210ENST00000598780 SCRIBQ14160 1630 aa37.14■■■■□ 3.54
UBA52-210ENST00000598780 DNAJC5BQ9UF47 199 aa37.04■■■■□ 3.52
UBA52-210ENST00000598780 SHROOM4Q9ULL8 1493 aa36.89■■■■□ 3.5
UBA52-210ENST00000598780 EIF4G1Q04637 1599 aaKnown RBP36.34■■■■□ 3.41
UBA52-210ENST00000598780 CC2D2AQ9P2K1 1620 aa36.26■■■■□ 3.39
UBA52-210ENST00000598780 CECR2Q9BXF3 1484 aa36.11■■■■□ 3.37
UBA52-210ENST00000598780 SMARCA4P51532 1647 aa35.45■■■■□ 3.27
UBA52-210ENST00000598780 BAZ1AQ9NRL2 1556 aaPredicted RBP35.38■■■■□ 3.25
UBA52-210ENST00000598780 NCAPD3P42695 1498 aa35.35■■■■□ 3.25
UBA52-210ENST00000598780 ATAD2BQ9ULI0 1458 aa35.34■■■■□ 3.25
UBA52-210ENST00000598780 SMARCA2P51531 1590 aa35.3■■■■□ 3.24
UBA52-210ENST00000598780 HMGXB3Q12766 1538 aa35.17■■■■□ 3.22
UBA52-210ENST00000598780 MROH2BQ7Z745 1585 aa35.14■■■■□ 3.22
UBA52-210ENST00000598780 BAZ1BQ9UIG0 1483 aaKnown RBP35.08■■■■□ 3.21
UBA52-210ENST00000598780 PEG3Q9GZU2 1588 aa35.08■■■■□ 3.21
UBA52-210ENST00000598780 WIZO95785 1651 aa34.73■■■■□ 3.15
UBA52-210ENST00000598780 ERCC6Q03468 1493 aa34.67■■■■□ 3.14
UBA52-210ENST00000598780 NESP48681 1621 aa34.63■■■■□ 3.13
UBA52-210ENST00000598780 RSF1Q96T23 1441 aaPredicted RBP34.63■■■■□ 3.13
UBA52-210ENST00000598780 LAMC3Q9Y6N6 1575 aa34.49■■■■□ 3.11
UBA52-210ENST00000598780 TOP2AP11388 1531 aaKnown RBP34.39■■■■□ 3.1
UBA52-210ENST00000598780 CUX2O14529 1486 aa34.36■■■■□ 3.09
UBA52-210ENST00000598780 CADPSQ9ULU8 1353 aa34.32■■■■□ 3.08
UBA52-210ENST00000598780 PDS5BQ9NTI5 1447 aa34.29■■■■□ 3.08
UBA52-210ENST00000598780 KIF21AQ7Z4S6 1674 aa34.18■■■■□ 3.06
UBA52-210ENST00000598780 THOC2Q8NI27 1593 aaKnown RBP34.16■■■■□ 3.06
UBA52-210ENST00000598780 CFTRP13569 1480 aa34.04■■■■□ 3.04
UBA52-210ENST00000598780 MRC2Q9UBG0 1479 aa33.97■■■■□ 3.03
UBA52-210ENST00000598780 CEP164Q9UPV0 1460 aa33.96■■■■□ 3.03
UBA52-210ENST00000598780 CCDC88BA6NC98 1476 aa33.95■■■■□ 3.03
UBA52-210ENST00000598780 FANCD2Q9BXW9 1451 aa33.95■■■■□ 3.03
UBA52-210ENST00000598780 WDR62O43379 1518 aa33.84■■■■□ 3.01
UBA52-210ENST00000598780 PRDM2Q13029 1718 aa33.71■■■□□ 2.99
UBA52-210ENST00000598780 DNAJC5Q9H3Z4 198 aa33.63■■■□□ 2.97
UBA52-210ENST00000598780 URB2Q14146 1524 aaKnown RBP33.63■■■□□ 2.97
UBA52-210ENST00000598780 SUPT5HO00267 1087 aaKnown RBP33.57■■■□□ 2.96
UBA52-210ENST00000598780 TOPBP1Q92547 1522 aa33.37■■■□□ 2.93
UBA52-210ENST00000598780 ABCC8Q09428 1581 aa33.33■■■□□ 2.93
UBA52-210ENST00000598780 DNMBPQ6XZF7 1577 aa33.3■■■□□ 2.92
UBA52-210ENST00000598780 IFT140Q96RY7 1462 aa33.25■■■□□ 2.91
UBA52-210ENST00000598780 ZNF608Q9ULD9 1512 aaPredicted RBP33.12■■■□□ 2.89
UBA52-210ENST00000598780 POLA1P09884 1462 aaPredicted RBP33.07■■■□□ 2.88
UBA52-210ENST00000598780 CUX1P39880 1505 aa33■■■□□ 2.87
UBA52-210ENST00000598780 TARBP1Q13395 1621 aaKnown RBP32.99■■■□□ 2.87
UBA52-210ENST00000598780 EIF4G3O43432 1585 aaKnown RBP32.99■■■□□ 2.87
UBA52-210ENST00000598780 FGD5Q6ZNL6 1462 aa32.95■■■□□ 2.87
UBA52-210ENST00000598780 RAD54L2Q9Y4B4 1467 aa32.93■■■□□ 2.86
UBA52-210ENST00000598780 SOGA1O94964 1423 aa32.92■■■□□ 2.86
UBA52-210ENST00000598780 AQRO60306 1485 aaKnown RBP eCLIP32.87■■■□□ 2.854e-8■■■■■ 30.6
UBA52-210ENST00000598780 OSCARQ8IYS5 282 aa32.86■■■□□ 2.85
UBA52-210ENST00000598780 TDRD9Q8NDG6 1382 aaKnown RBP32.79■■■□□ 2.84
UBA52-210ENST00000598780 WDR97A6NE52 1622 aa32.73■■■□□ 2.83
UBA52-210ENST00000598780 WRNQ14191 1432 aaPredicted RBP eCLIP32.69■■■□□ 2.82
UBA52-210ENST00000598780 TOP2BQ02880 1626 aa32.62■■■□□ 2.81
UBA52-210ENST00000598780 SNAPC4Q5SXM2 1469 aa32.61■■■□□ 2.81
UBA52-210ENST00000598780 BIVM-ERCC5R4GMW8 1640 aa32.61■■■□□ 2.81
UBA52-210ENST00000598780 SYNJ1O43426 1573 aa32.61■■■□□ 2.81
UBA52-210ENST00000598780 FBLN2P98095 1184 aa32.6■■■□□ 2.81
UBA52-210ENST00000598780 GRIN2BQ13224 1484 aa32.6■■■□□ 2.81
UBA52-210ENST00000598780 ABCA10Q8WWZ4 1543 aa32.59■■■□□ 2.81
UBA52-210ENST00000598780 CHD1O14646 1710 aa32.58■■■□□ 2.81
UBA52-210ENST00000598780 GAPVD1Q14C86 1478 aa32.54■■■□□ 2.8
UBA52-210ENST00000598780 MAGI1Q96QZ7 1491 aaPredicted RBP32.54■■■□□ 2.8
UBA52-210ENST00000598780 ABCA5Q8WWZ7 1642 aa32.49■■■□□ 2.79
UBA52-210ENST00000598780 TRIM41Q8WV44 630 aa32.48■■■□□ 2.79
UBA52-210ENST00000598780 PBRM1Q86U86 1689 aa32.46■■■□□ 2.79
UBA52-210ENST00000598780 CHMP7Q8WUX9 453 aaPredicted RBP32.44■■■□□ 2.78
UBA52-210ENST00000598780 SYNJ2O15056 1496 aa32.42■■■□□ 2.78
UBA52-210ENST00000598780 RIMBP3CA6NJZ7 1639 aa32.37■■■□□ 2.77
UBA52-210ENST00000598780 RIMBP3BA6NNM3 1639 aa32.37■■■□□ 2.77
UBA52-210ENST00000598780 RIMBP3Q9UFD9 1639 aa32.37■■■□□ 2.77
UBA52-210ENST00000598780 ARHGEF11O15085 1522 aa32.36■■■□□ 2.77
UBA52-210ENST00000598780 CLASP1Q7Z460 1538 aa32.25■■■□□ 2.75
UBA52-210ENST00000598780 ADAMTS12P58397 1594 aa32.24■■■□□ 2.75
UBA52-210ENST00000598780 ERICH3Q5RHP9 1530 aa32.2■■■□□ 2.74
UBA52-210ENST00000598780 FHAD1B1AJZ9 1412 aa32.17■■■□□ 2.74
UBA52-210ENST00000598780 GRIN2AQ12879 1464 aa32.16■■■□□ 2.74
UBA52-210ENST00000598780 ARAP1Q96P48 1450 aa32.09■■■□□ 2.73
UBA52-210ENST00000598780 CYB5RLQ6IPT4 315 aa32.07■■■□□ 2.72
UBA52-210ENST00000598780 KIF27Q86VH2 1401 aa32.04■■■□□ 2.72
UBA52-210ENST00000598780 NUP160Q12769 1436 aa32.01■■■□□ 2.72
UBA52-210ENST00000598780 CEP170Q5SW79 1584 aa32.01■■■□□ 2.71
UBA52-210ENST00000598780 IGF1RP08069 1367 aa31.89■■■□□ 2.7
UBA52-210ENST00000598780 CUL7Q14999 1698 aa31.86■■■□□ 2.69
UBA52-210ENST00000598780 SHROOM2Q13796 1616 aa31.78■■■□□ 2.68
UBA52-210ENST00000598780 ERCC6L2Q5T890 1561 aa31.77■■■□□ 2.68
UBA52-210ENST00000598780 RUSC2Q8N2Y8 1516 aa31.77■■■□□ 2.68
UBA52-210ENST00000598780 CARMIL1Q5VZK9 1371 aa31.72■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms