RNA–Protein interactions for RNA: ENST00000505534.5

DDR1-257, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-257ENST00000505534 NISCHQ9Y2I1 1504 aa42.78■■■■■ 4.44
DDR1-257ENST00000505534 ABCC9O60706 1549 aa38.82■■■■□ 3.8
DDR1-257ENST00000505534 CCDC180Q9P1Z9 1646 aa38.56■■■■□ 3.76
DDR1-257ENST00000505534 RB1CC1Q8TDY2 1594 aa36.85■■■■□ 3.49
DDR1-257ENST00000505534 DNAJC5BQ9UF47 199 aa36.72■■■■□ 3.47
DDR1-257ENST00000505534 NACADO15069 1562 aa36.53■■■■□ 3.44
DDR1-257ENST00000505534 DCAF8L2P0C7V8 631 aa36.25■■■■□ 3.39
DDR1-257ENST00000505534 PABPN1Q86U42 306 aaKnown RBP eCLIP36.1■■■■□ 3.37
DDR1-257ENST00000505534 UNC13AQ9UPW8 1703 aa36.05■■■■□ 3.36
DDR1-257ENST00000505534 MYO15BQ96JP2 1530 aa35.93■■■■□ 3.34
DDR1-257ENST00000505534 BICRAQ9NZM4 1560 aa35.77■■■■□ 3.32
DDR1-257ENST00000505534 ZCCHC6Q5VYS8 1495 aaKnown RBP35.36■■■■□ 3.25
DDR1-257ENST00000505534 DCAF1Q9Y4B6 1507 aa35.34■■■■□ 3.25
DDR1-257ENST00000505534 SHROOM4Q9ULL8 1493 aa35.29■■■■□ 3.24
DDR1-257ENST00000505534 CC2D2AQ9P2K1 1620 aa35.08■■■■□ 3.21
DDR1-257ENST00000505534 SCRIBQ14160 1630 aa35.06■■■■□ 3.2
DDR1-257ENST00000505534 CECR2Q9BXF3 1484 aa35.03■■■■□ 3.2
DDR1-257ENST00000505534 EIF4G1Q04637 1599 aaKnown RBP34.92■■■■□ 3.18
DDR1-257ENST00000505534 DNAJC5Q9H3Z4 198 aa34.01■■■■□ 3.03
DDR1-257ENST00000505534 NCAPD3P42695 1498 aa33.72■■■□□ 2.99
DDR1-257ENST00000505534 CUX2O14529 1486 aa33.64■■■□□ 2.98
DDR1-257ENST00000505534 ERCC6Q03468 1493 aa33.56■■■□□ 2.96
DDR1-257ENST00000505534 ATAD2BQ9ULI0 1458 aa33.55■■■□□ 2.96
DDR1-257ENST00000505534 SMARCA2P51531 1590 aa33.47■■■□□ 2.95
DDR1-257ENST00000505534 SMARCA4P51532 1647 aa33.44■■■□□ 2.94
DDR1-257ENST00000505534 HMGXB3Q12766 1538 aa33.43■■■□□ 2.94
DDR1-257ENST00000505534 NESP48681 1621 aa33.25■■■□□ 2.91
DDR1-257ENST00000505534 BAZ1AQ9NRL2 1556 aaPredicted RBP33.23■■■□□ 2.91
DDR1-257ENST00000505534 BAZ1BQ9UIG0 1483 aaKnown RBP33.2■■■□□ 2.91
DDR1-257ENST00000505534 PEG3Q9GZU2 1588 aa33.13■■■□□ 2.89
DDR1-257ENST00000505534 LAMC3Q9Y6N6 1575 aa33.02■■■□□ 2.88
DDR1-257ENST00000505534 THOC2Q8NI27 1593 aaKnown RBP33■■■□□ 2.87
DDR1-257ENST00000505534 MROH2BQ7Z745 1585 aa32.94■■■□□ 2.86
DDR1-257ENST00000505534 KIF21AQ7Z4S6 1674 aa32.85■■■□□ 2.85
DDR1-257ENST00000505534 PDS5BQ9NTI5 1447 aa32.85■■■□□ 2.85
DDR1-257ENST00000505534 CADPSQ9ULU8 1353 aa32.68■■■□□ 2.82
DDR1-257ENST00000505534 MRC2Q9UBG0 1479 aa32.55■■■□□ 2.8
DDR1-257ENST00000505534 WIZO95785 1651 aa32.54■■■□□ 2.8
DDR1-257ENST00000505534 WDR62O43379 1518 aa32.48■■■□□ 2.79
DDR1-257ENST00000505534 CEP164Q9UPV0 1460 aa32.35■■■□□ 2.77
DDR1-257ENST00000505534 TRIM41Q8WV44 630 aa32.33■■■□□ 2.77
DDR1-257ENST00000505534 FANCD2Q9BXW9 1451 aa32.29■■■□□ 2.76
DDR1-257ENST00000505534 CFTRP13569 1480 aa32.23■■■□□ 2.75
DDR1-257ENST00000505534 RSF1Q96T23 1441 aaPredicted RBP32.15■■■□□ 2.74
DDR1-257ENST00000505534 TOP2AP11388 1531 aaKnown RBP32.1■■■□□ 2.73
DDR1-257ENST00000505534 OSCARQ8IYS5 282 aa32.07■■■□□ 2.72
DDR1-257ENST00000505534 URB2Q14146 1524 aaKnown RBP32.03■■■□□ 2.72
DDR1-257ENST00000505534 PRDM2Q13029 1718 aa31.93■■■□□ 2.7
DDR1-257ENST00000505534 CCDC88BA6NC98 1476 aa31.75■■■□□ 2.67
DDR1-257ENST00000505534 IFT140Q96RY7 1462 aa31.73■■■□□ 2.67
DDR1-257ENST00000505534 ZNF608Q9ULD9 1512 aaPredicted RBP31.68■■■□□ 2.66
DDR1-257ENST00000505534 RIMBP3CA6NJZ7 1639 aa31.65■■■□□ 2.66
DDR1-257ENST00000505534 RIMBP3BA6NNM3 1639 aa31.65■■■□□ 2.66
DDR1-257ENST00000505534 RIMBP3Q9UFD9 1639 aa31.65■■■□□ 2.66
DDR1-257ENST00000505534 TOPBP1Q92547 1522 aa31.65■■■□□ 2.66
DDR1-257ENST00000505534 ABCC8Q09428 1581 aa31.6■■■□□ 2.65
DDR1-257ENST00000505534 ARHGEF11O15085 1522 aa31.51■■■□□ 2.63
DDR1-257ENST00000505534 EIF4G3O43432 1585 aaKnown RBP31.5■■■□□ 2.63
DDR1-257ENST00000505534 DNMBPQ6XZF7 1577 aa31.5■■■□□ 2.63
DDR1-257ENST00000505534 TARBP1Q13395 1621 aaKnown RBP31.39■■■□□ 2.62
DDR1-257ENST00000505534 AQRO60306 1485 aaKnown RBP eCLIP31.37■■■□□ 2.612e-7■■■■■ 31.6
DDR1-257ENST00000505534 CHD1O14646 1710 aa31.36■■■□□ 2.61
DDR1-257ENST00000505534 CYB5RLQ6IPT4 315 aa31.32■■■□□ 2.6
DDR1-257ENST00000505534 POLA1P09884 1462 aaPredicted RBP31.29■■■□□ 2.6
DDR1-257ENST00000505534 FBLN2P98095 1184 aa31.24■■■□□ 2.59
DDR1-257ENST00000505534 ARAP1Q96P48 1450 aa31.17■■■□□ 2.58
DDR1-257ENST00000505534 RAD54L2Q9Y4B4 1467 aa31.17■■■□□ 2.58
DDR1-257ENST00000505534 SOGA1O94964 1423 aa31.16■■■□□ 2.58
DDR1-257ENST00000505534 TDRD9Q8NDG6 1382 aaKnown RBP31.12■■■□□ 2.57
DDR1-257ENST00000505534 WDR97A6NE52 1622 aa31.09■■■□□ 2.57
DDR1-257ENST00000505534 TRHP20396 242 aaPredicted RBP31.08■■■□□ 2.57
DDR1-257ENST00000505534 FGD5Q6ZNL6 1462 aa31.04■■■□□ 2.56
DDR1-257ENST00000505534 SNAPC4Q5SXM2 1469 aa31.03■■■□□ 2.56
DDR1-257ENST00000505534 CHMP7Q8WUX9 453 aaPredicted RBP30.98■■■□□ 2.55
DDR1-257ENST00000505534 MAGI1Q96QZ7 1491 aaPredicted RBP30.97■■■□□ 2.55
DDR1-257ENST00000505534 CUX1P39880 1505 aa30.97■■■□□ 2.55
DDR1-257ENST00000505534 CLASP1Q7Z460 1538 aa30.97■■■□□ 2.55
DDR1-257ENST00000505534 SYNJ1O43426 1573 aa30.95■■■□□ 2.54
DDR1-257ENST00000505534 GRIN2BQ13224 1484 aa30.93■■■□□ 2.54
DDR1-257ENST00000505534 SYNJ2O15056 1496 aa30.86■■■□□ 2.53
DDR1-257ENST00000505534 PBRM1Q86U86 1689 aa30.79■■■□□ 2.52
DDR1-257ENST00000505534 GAPVD1Q14C86 1478 aa30.78■■■□□ 2.52
DDR1-257ENST00000505534 ABCA10Q8WWZ4 1543 aa30.69■■■□□ 2.5
DDR1-257ENST00000505534 ABCA5Q8WWZ7 1642 aa30.66■■■□□ 2.5
DDR1-257ENST00000505534 GRIN2AQ12879 1464 aa30.52■■■□□ 2.48
DDR1-257ENST00000505534 WRNQ14191 1432 aaPredicted RBP eCLIP30.52■■■□□ 2.48
DDR1-257ENST00000505534 SUPT5HO00267 1087 aaKnown RBP30.47■■■□□ 2.47
DDR1-257ENST00000505534 ADAMTS12P58397 1594 aa30.45■■■□□ 2.46
DDR1-257ENST00000505534 ERCC6L2Q5T890 1561 aa30.45■■■□□ 2.46
DDR1-257ENST00000505534 NUP160Q12769 1436 aa30.44■■■□□ 2.46
DDR1-257ENST00000505534 AEBP2Q6ZN18 517 aaPredicted RBP30.43■■■□□ 2.46
DDR1-257ENST00000505534 CEP170Q5SW79 1584 aa30.41■■■□□ 2.46
DDR1-257ENST00000505534 BIVM-ERCC5R4GMW8 1640 aa30.41■■■□□ 2.46
DDR1-257ENST00000505534 TOP2BQ02880 1626 aa30.4■■■□□ 2.46
DDR1-257ENST00000505534 FHAD1B1AJZ9 1412 aa30.38■■■□□ 2.45
DDR1-257ENST00000505534 SHROOM2Q13796 1616 aa30.35■■■□□ 2.45
DDR1-257ENST00000505534 ERICH3Q5RHP9 1530 aa30.31■■■□□ 2.44
DDR1-257ENST00000505534 PRG4Q92954 1404 aaPredicted RBP30.17■■■□□ 2.42
DDR1-257ENST00000505534 JPH4Q96JJ6 628 aa30.16■■■□□ 2.42
DDR1-257ENST00000505534 KIF13AQ9H1H9 1805 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms