RNA–Protein interactions for RNA: ENST00000447414.5

THRB-210, Transcript of thyroid hormone receptor beta, humanhuman

TSL 4

Gene THRB, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRB-210ENST00000447414 NISCHQ9Y2I1 1504 aa47.3■■■■■ 5.16
THRB-210ENST00000447414 CCDC180Q9P1Z9 1646 aa42.1■■■■■ 4.33
THRB-210ENST00000447414 ABCC9O60706 1549 aa41.17■■■■■ 4.18
THRB-210ENST00000447414 RB1CC1Q8TDY2 1594 aa39.6■■■■□ 3.93
THRB-210ENST00000447414 NACADO15069 1562 aa39.59■■■■□ 3.93
THRB-210ENST00000447414 MYO15BQ96JP2 1530 aa39.47■■■■□ 3.91
THRB-210ENST00000447414 ZCCHC6Q5VYS8 1495 aaKnown RBP39.42■■■■□ 3.9
THRB-210ENST00000447414 DCAF1Q9Y4B6 1507 aa39.23■■■■□ 3.87
THRB-210ENST00000447414 DCAF8L2P0C7V8 631 aa39.15■■■■□ 3.86
THRB-210ENST00000447414 UNC13AQ9UPW8 1703 aa38.76■■■■□ 3.8
THRB-210ENST00000447414 BICRAQ9NZM4 1560 aa38.57■■■■□ 3.76
THRB-210ENST00000447414 PABPN1Q86U42 306 aaKnown RBP eCLIP38.4■■■■□ 3.74
THRB-210ENST00000447414 SCRIBQ14160 1630 aa38.27■■■■□ 3.72
THRB-210ENST00000447414 SHROOM4Q9ULL8 1493 aa38.15■■■■□ 3.7
THRB-210ENST00000447414 DNAJC5BQ9UF47 199 aa38.02■■■■□ 3.68
THRB-210ENST00000447414 EIF4G1Q04637 1599 aaKnown RBP37.46■■■■□ 3.59
THRB-210ENST00000447414 CC2D2AQ9P2K1 1620 aa37.31■■■■□ 3.56
THRB-210ENST00000447414 CECR2Q9BXF3 1484 aa37.04■■■■□ 3.52
THRB-210ENST00000447414 SMARCA4P51532 1647 aa36.7■■■■□ 3.47
THRB-210ENST00000447414 BAZ1AQ9NRL2 1556 aaPredicted RBP36.61■■■■□ 3.45
THRB-210ENST00000447414 NCAPD3P42695 1498 aa36.59■■■■□ 3.45
THRB-210ENST00000447414 ATAD2BQ9ULI0 1458 aa36.56■■■■□ 3.44
THRB-210ENST00000447414 PEG3Q9GZU2 1588 aa36.47■■■■□ 3.43
THRB-210ENST00000447414 SMARCA2P51531 1590 aa36.44■■■■□ 3.42
THRB-210ENST00000447414 MROH2BQ7Z745 1585 aa36.44■■■■□ 3.42
THRB-210ENST00000447414 HMGXB3Q12766 1538 aa36.39■■■■□ 3.42
THRB-210ENST00000447414 BAZ1BQ9UIG0 1483 aaKnown RBP36.14■■■■□ 3.38
THRB-210ENST00000447414 RSF1Q96T23 1441 aaPredicted RBP35.99■■■■□ 3.35
THRB-210ENST00000447414 WIZO95785 1651 aa35.98■■■■□ 3.35
THRB-210ENST00000447414 NESP48681 1621 aa35.65■■■■□ 3.3
THRB-210ENST00000447414 TOP2AP11388 1531 aaKnown RBP35.64■■■■□ 3.3
THRB-210ENST00000447414 LAMC3Q9Y6N6 1575 aa35.57■■■■□ 3.28
THRB-210ENST00000447414 CADPSQ9ULU8 1353 aa35.44■■■■□ 3.26
THRB-210ENST00000447414 ERCC6Q03468 1493 aa35.4■■■■□ 3.26
THRB-210ENST00000447414 PDS5BQ9NTI5 1447 aa35.27■■■■□ 3.24
THRB-210ENST00000447414 CFTRP13569 1480 aa35.27■■■■□ 3.24
THRB-210ENST00000447414 CUX2O14529 1486 aa35.26■■■■□ 3.23
THRB-210ENST00000447414 THOC2Q8NI27 1593 aaKnown RBP35.22■■■■□ 3.23
THRB-210ENST00000447414 CCDC88BA6NC98 1476 aa35.21■■■■□ 3.23
THRB-210ENST00000447414 KIF21AQ7Z4S6 1674 aa35.21■■■■□ 3.23
THRB-210ENST00000447414 FANCD2Q9BXW9 1451 aa35■■■■□ 3.19
THRB-210ENST00000447414 MRC2Q9UBG0 1479 aa34.96■■■■□ 3.19
THRB-210ENST00000447414 CEP164Q9UPV0 1460 aa34.94■■■■□ 3.18
THRB-210ENST00000447414 WDR62O43379 1518 aa34.92■■■■□ 3.18
THRB-210ENST00000447414 PRDM2Q13029 1718 aa34.92■■■■□ 3.18
THRB-210ENST00000447414 URB2Q14146 1524 aaKnown RBP34.72■■■■□ 3.15
THRB-210ENST00000447414 SUPT5HO00267 1087 aaKnown RBP34.67■■■■□ 3.14
THRB-210ENST00000447414 TOPBP1Q92547 1522 aa34.46■■■■□ 3.11
THRB-210ENST00000447414 ABCC8Q09428 1581 aa34.41■■■■□ 3.1
THRB-210ENST00000447414 DNMBPQ6XZF7 1577 aa34.4■■■■□ 3.1
THRB-210ENST00000447414 DNAJC5Q9H3Z4 198 aa34.28■■■■□ 3.08
THRB-210ENST00000447414 IFT140Q96RY7 1462 aa34.26■■■■□ 3.07
THRB-210ENST00000447414 CUX1P39880 1505 aa34.19■■■■□ 3.06
THRB-210ENST00000447414 POLA1P09884 1462 aaPredicted RBP34.18■■■■□ 3.06
THRB-210ENST00000447414 TARBP1Q13395 1621 aaKnown RBP34.16■■■■□ 3.06
THRB-210ENST00000447414 ZNF608Q9ULD9 1512 aaPredicted RBP34.14■■■■□ 3.06
THRB-210ENST00000447414 FGD5Q6ZNL6 1462 aa34.03■■■■□ 3.04
THRB-210ENST00000447414 RAD54L2Q9Y4B4 1467 aa33.98■■■■□ 3.03
THRB-210ENST00000447414 EIF4G3O43432 1585 aaKnown RBP33.98■■■■□ 3.03
THRB-210ENST00000447414 SOGA1O94964 1423 aa33.95■■■■□ 3.02
THRB-210ENST00000447414 WDR97A6NE52 1622 aa33.88■■■■□ 3.01
THRB-210ENST00000447414 AQRO60306 1485 aaKnown RBP eCLIP33.88■■■■□ 3.01
THRB-210ENST00000447414 BIVM-ERCC5R4GMW8 1640 aa33.86■■■■□ 3.01
THRB-210ENST00000447414 TOP2BQ02880 1626 aa33.86■■■■□ 3.01
THRB-210ENST00000447414 WRNQ14191 1432 aaPredicted RBP eCLIP33.85■■■■□ 3.01
THRB-210ENST00000447414 SYNJ1O43426 1573 aa33.83■■■■□ 3.01
THRB-210ENST00000447414 ABCA10Q8WWZ4 1543 aa33.77■■■■□ 3
THRB-210ENST00000447414 TDRD9Q8NDG6 1382 aaKnown RBP33.76■■■■□ 3
THRB-210ENST00000447414 ABCA5Q8WWZ7 1642 aa33.66■■■□□ 2.98
THRB-210ENST00000447414 OSCARQ8IYS5 282 aa33.64■■■□□ 2.98
THRB-210ENST00000447414 GRIN2BQ13224 1484 aa33.6■■■□□ 2.97
THRB-210ENST00000447414 GAPVD1Q14C86 1478 aa33.57■■■□□ 2.97
THRB-210ENST00000447414 SNAPC4Q5SXM2 1469 aa33.56■■■□□ 2.96
THRB-210ENST00000447414 MAGI1Q96QZ7 1491 aaPredicted RBP33.55■■■□□ 2.96
THRB-210ENST00000447414 CHD1O14646 1710 aa33.52■■■□□ 2.96
THRB-210ENST00000447414 PBRM1Q86U86 1689 aa33.51■■■□□ 2.95
THRB-210ENST00000447414 SYNJ2O15056 1496 aa33.42■■■□□ 2.94
THRB-210ENST00000447414 ERICH3Q5RHP9 1530 aa33.34■■■□□ 2.93
THRB-210ENST00000447414 ADAMTS12P58397 1594 aa33.3■■■□□ 2.92
THRB-210ENST00000447414 CLASP1Q7Z460 1538 aa33.29■■■□□ 2.92
THRB-210ENST00000447414 FBLN2P98095 1184 aa33.25■■■□□ 2.91
THRB-210ENST00000447414 CHMP7Q8WUX9 453 aaPredicted RBP33.24■■■□□ 2.91
THRB-210ENST00000447414 FHAD1B1AJZ9 1412 aa33.21■■■□□ 2.91
THRB-210ENST00000447414 ARHGEF11O15085 1522 aa33.21■■■□□ 2.91
THRB-210ENST00000447414 RIMBP3CA6NJZ7 1639 aa33.2■■■□□ 2.91
THRB-210ENST00000447414 RIMBP3BA6NNM3 1639 aa33.2■■■□□ 2.91
THRB-210ENST00000447414 RIMBP3Q9UFD9 1639 aa33.2■■■□□ 2.91
THRB-210ENST00000447414 GRIN2AQ12879 1464 aa33.18■■■□□ 2.9
THRB-210ENST00000447414 NUP160Q12769 1436 aa33.13■■■□□ 2.89
THRB-210ENST00000447414 KIF27Q86VH2 1401 aa33.11■■■□□ 2.89
THRB-210ENST00000447414 IGF1RP08069 1367 aa33.1■■■□□ 2.89
THRB-210ENST00000447414 CEP170Q5SW79 1584 aa33.06■■■□□ 2.88
THRB-210ENST00000447414 ARAP1Q96P48 1450 aa32.96■■■□□ 2.87
THRB-210ENST00000447414 CUL7Q14999 1698 aa32.96■■■□□ 2.87
THRB-210ENST00000447414 SHROOM2Q13796 1616 aa32.9■■■□□ 2.86
THRB-210ENST00000447414 RUSC2Q8N2Y8 1516 aa32.86■■■□□ 2.85
THRB-210ENST00000447414 TRIM41Q8WV44 630 aa32.85■■■□□ 2.85
THRB-210ENST00000447414 CARMIL1Q5VZK9 1371 aa32.82■■■□□ 2.84
THRB-210ENST00000447414 ERCC6L2Q5T890 1561 aa32.78■■■□□ 2.84
THRB-210ENST00000447414 CYB5RLQ6IPT4 315 aa32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms