RNA–Protein interactions for RNA: ENST00000465915.1

TPRA1-206, Transcript of transmembrane protein adipocyte associated 1, humanhuman

TSL 3

Gene TPRA1, Length 569 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRA1-206ENST00000465915 NISCHQ9Y2I1 1504 aa48.26■■■■■ 5.32
TPRA1-206ENST00000465915 CCDC180Q9P1Z9 1646 aa42.72■■■■■ 4.43
TPRA1-206ENST00000465915 ABCC9O60706 1549 aa41.59■■■■■ 4.25
TPRA1-206ENST00000465915 DCAF8L2P0C7V8 631 aa40.38■■■■■ 4.05
TPRA1-206ENST00000465915 ZCCHC6Q5VYS8 1495 aaKnown RBP40.23■■■■■ 4.03
TPRA1-206ENST00000465915 NACADO15069 1562 aa40.17■■■■■ 4.02
TPRA1-206ENST00000465915 RB1CC1Q8TDY2 1594 aa40.14■■■■■ 4.02
TPRA1-206ENST00000465915 MYO15BQ96JP2 1530 aa40.02■■■■■ 4
TPRA1-206ENST00000465915 DCAF1Q9Y4B6 1507 aa39.95■■■■□ 3.99
TPRA1-206ENST00000465915 UNC13AQ9UPW8 1703 aa39.07■■■■□ 3.85
TPRA1-206ENST00000465915 SCRIBQ14160 1630 aa39.02■■■■□ 3.84
TPRA1-206ENST00000465915 PABPN1Q86U42 306 aaKnown RBP eCLIP38.96■■■■□ 3.83
TPRA1-206ENST00000465915 BICRAQ9NZM4 1560 aa38.81■■■■□ 3.8
TPRA1-206ENST00000465915 SHROOM4Q9ULL8 1493 aa38.54■■■■□ 3.76
TPRA1-206ENST00000465915 DNAJC5BQ9UF47 199 aa37.88■■■■□ 3.65
TPRA1-206ENST00000465915 EIF4G1Q04637 1599 aaKnown RBP37.82■■■■□ 3.65
TPRA1-206ENST00000465915 CC2D2AQ9P2K1 1620 aa37.58■■■■□ 3.61
TPRA1-206ENST00000465915 CECR2Q9BXF3 1484 aa37.53■■■■□ 3.6
TPRA1-206ENST00000465915 BAZ1AQ9NRL2 1556 aaPredicted RBP37.41■■■■□ 3.58
TPRA1-206ENST00000465915 SMARCA4P51532 1647 aa37.34■■■■□ 3.57
TPRA1-206ENST00000465915 MROH2BQ7Z745 1585 aa37.17■■■■□ 3.54
TPRA1-206ENST00000465915 ATAD2BQ9ULI0 1458 aa37.12■■■■□ 3.53
TPRA1-206ENST00000465915 SMARCA2P51531 1590 aa37.11■■■■□ 3.53
TPRA1-206ENST00000465915 NCAPD3P42695 1498 aa37.07■■■■□ 3.52
TPRA1-206ENST00000465915 PEG3Q9GZU2 1588 aa36.97■■■■□ 3.51
TPRA1-206ENST00000465915 RSF1Q96T23 1441 aaPredicted RBP36.89■■■■□ 3.5
TPRA1-206ENST00000465915 HMGXB3Q12766 1538 aa36.88■■■■□ 3.49
TPRA1-206ENST00000465915 BAZ1BQ9UIG0 1483 aaKnown RBP36.86■■■■□ 3.49
TPRA1-206ENST00000465915 WIZO95785 1651 aa36.76■■■■□ 3.47
TPRA1-206ENST00000465915 TOP2AP11388 1531 aaKnown RBP36.43■■■■□ 3.42
TPRA1-206ENST00000465915 SUPT5HO00267 1087 aaKnown RBP36.29■■■■□ 3.4
TPRA1-206ENST00000465915 CADPSQ9ULU8 1353 aa36.04■■■■□ 3.36
TPRA1-206ENST00000465915 LAMC3Q9Y6N6 1575 aa36.03■■■■□ 3.36
TPRA1-206ENST00000465915 NESP48681 1621 aa36.03■■■■□ 3.36
TPRA1-206ENST00000465915 CCDC88BA6NC98 1476 aa36.02■■■■□ 3.36
TPRA1-206ENST00000465915 ERCC6Q03468 1493 aa35.89■■■■□ 3.34
TPRA1-206ENST00000465915 PDS5BQ9NTI5 1447 aa35.86■■■■□ 3.33
TPRA1-206ENST00000465915 CFTRP13569 1480 aa35.85■■■■□ 3.33
TPRA1-206ENST00000465915 FANCD2Q9BXW9 1451 aa35.6■■■■□ 3.29
TPRA1-206ENST00000465915 KIF21AQ7Z4S6 1674 aa35.56■■■■□ 3.28
TPRA1-206ENST00000465915 CEP164Q9UPV0 1460 aa35.53■■■■□ 3.28
TPRA1-206ENST00000465915 PRDM2Q13029 1718 aa35.49■■■■□ 3.27
TPRA1-206ENST00000465915 MRC2Q9UBG0 1479 aa35.41■■■■□ 3.26
TPRA1-206ENST00000465915 THOC2Q8NI27 1593 aaKnown RBP35.37■■■■□ 3.25
TPRA1-206ENST00000465915 CUX2O14529 1486 aa35.36■■■■□ 3.25
TPRA1-206ENST00000465915 WDR62O43379 1518 aa35.23■■■■□ 3.23
TPRA1-206ENST00000465915 URB2Q14146 1524 aaKnown RBP35.16■■■■□ 3.22
TPRA1-206ENST00000465915 ABCC8Q09428 1581 aa35.14■■■■□ 3.22
TPRA1-206ENST00000465915 TOPBP1Q92547 1522 aa35.03■■■■□ 3.2
TPRA1-206ENST00000465915 DNMBPQ6XZF7 1577 aa35.01■■■■□ 3.2
TPRA1-206ENST00000465915 CUX1P39880 1505 aa34.85■■■■□ 3.17
TPRA1-206ENST00000465915 WRNQ14191 1432 aaPredicted RBP eCLIP34.81■■■■□ 3.16
TPRA1-206ENST00000465915 IFT140Q96RY7 1462 aa34.79■■■■□ 3.16
TPRA1-206ENST00000465915 POLA1P09884 1462 aaPredicted RBP34.75■■■■□ 3.15
TPRA1-206ENST00000465915 FGD5Q6ZNL6 1462 aa34.71■■■■□ 3.15
TPRA1-206ENST00000465915 SOGA1O94964 1423 aa34.69■■■■□ 3.14
TPRA1-206ENST00000465915 TOP2BQ02880 1626 aa34.64■■■■□ 3.14
TPRA1-206ENST00000465915 SYNJ1O43426 1573 aa34.61■■■■□ 3.13
TPRA1-206ENST00000465915 RAD54L2Q9Y4B4 1467 aa34.6■■■■□ 3.13
TPRA1-206ENST00000465915 BIVM-ERCC5R4GMW8 1640 aa34.6■■■■□ 3.13
TPRA1-206ENST00000465915 TARBP1Q13395 1621 aaKnown RBP34.57■■■■□ 3.12
TPRA1-206ENST00000465915 ZNF608Q9ULD9 1512 aaPredicted RBP34.54■■■■□ 3.12
TPRA1-206ENST00000465915 TDRD9Q8NDG6 1382 aaKnown RBP34.44■■■■□ 3.1
TPRA1-206ENST00000465915 AQRO60306 1485 aaKnown RBP eCLIP34.43■■■■□ 3.12e-12■■■□□ 15.2
TPRA1-206ENST00000465915 ABCA10Q8WWZ4 1543 aa34.4■■■■□ 3.1
TPRA1-206ENST00000465915 EIF4G3O43432 1585 aaKnown RBP34.39■■■■□ 3.1
TPRA1-206ENST00000465915 WDR97A6NE52 1622 aa34.38■■■■□ 3.09
TPRA1-206ENST00000465915 TRIM41Q8WV44 630 aa34.3■■■■□ 3.08
TPRA1-206ENST00000465915 GAPVD1Q14C86 1478 aa34.27■■■■□ 3.08
TPRA1-206ENST00000465915 GRIN2BQ13224 1484 aa34.23■■■■□ 3.07
TPRA1-206ENST00000465915 ABCA5Q8WWZ7 1642 aa34.17■■■■□ 3.06
TPRA1-206ENST00000465915 KIF27Q86VH2 1401 aa34.11■■■■□ 3.05
TPRA1-206ENST00000465915 SNAPC4Q5SXM2 1469 aa34.1■■■■□ 3.05
TPRA1-206ENST00000465915 MAGI1Q96QZ7 1491 aaPredicted RBP34.1■■■■□ 3.05
TPRA1-206ENST00000465915 FBLN2P98095 1184 aa34.07■■■■□ 3.04
TPRA1-206ENST00000465915 PBRM1Q86U86 1689 aa34.06■■■■□ 3.04
TPRA1-206ENST00000465915 OSCARQ8IYS5 282 aa34.06■■■■□ 3.04
TPRA1-206ENST00000465915 CHMP7Q8WUX9 453 aaPredicted RBP34.03■■■■□ 3.04
TPRA1-206ENST00000465915 ERICH3Q5RHP9 1530 aa34.01■■■■□ 3.04
TPRA1-206ENST00000465915 CHIC1Q5VXU3 224 aa34■■■■□ 3.03
TPRA1-206ENST00000465915 DNAJC5Q9H3Z4 198 aa33.98■■■■□ 3.03
TPRA1-206ENST00000465915 SYNJ2O15056 1496 aa33.95■■■■□ 3.03
TPRA1-206ENST00000465915 FHAD1B1AJZ9 1412 aa33.9■■■■□ 3.02
TPRA1-206ENST00000465915 IGF1RP08069 1367 aa33.9■■■■□ 3.02
TPRA1-206ENST00000465915 CHD1O14646 1710 aa33.87■■■■□ 3.01
TPRA1-206ENST00000465915 ADAMTS12P58397 1594 aa33.84■■■■□ 3.01
TPRA1-206ENST00000465915 RUSC2Q8N2Y8 1516 aa33.76■■■■□ 3
TPRA1-206ENST00000465915 GRIN2AQ12879 1464 aa33.76■■■□□ 2.99
TPRA1-206ENST00000465915 CUL7Q14999 1698 aa33.74■■■□□ 2.99
TPRA1-206ENST00000465915 CARMIL1Q5VZK9 1371 aa33.73■■■□□ 2.99
TPRA1-206ENST00000465915 EEA1Q15075 1411 aa33.66■■■□□ 2.98
TPRA1-206ENST00000465915 CSRNP3Q8WYN3 585 aa33.6■■■□□ 2.97
TPRA1-206ENST00000465915 NUP160Q12769 1436 aa33.59■■■□□ 2.97
TPRA1-206ENST00000465915 CLASP1Q7Z460 1538 aa33.54■■■□□ 2.96
TPRA1-206ENST00000465915 FAM9AQ8IZU1 332 aaPredicted RBP33.54■■■□□ 2.96
TPRA1-206ENST00000465915 RAPGEF2Q9Y4G8 1499 aa33.54■■■□□ 2.96
TPRA1-206ENST00000465915 CEP170Q5SW79 1584 aa33.51■■■□□ 2.96
TPRA1-206ENST00000465915 PRXQ9BXM0 1461 aa33.45■■■□□ 2.95
TPRA1-206ENST00000465915 KIAA0586Q9BVV6 1533 aa33.38■■■□□ 2.93
TPRA1-206ENST00000465915 ARHGEF11O15085 1522 aa33.36■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms