RNA–Protein interactions for RNA: ENST00000359540.7

BCR-202, Transcript of BCR, RhoGEF and GTPase activating protein, humanhuman

TSL 1 (best) BASIC

Gene BCR, Length 4,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCR-202ENST00000359540 NISCHQ9Y2I1 1504 aa35.02■■■■□ 3.2
BCR-202ENST00000359540 DCAF8L2P0C7V8 631 aa34.34■■■■□ 3.09
BCR-202ENST00000359540 SUPT5HO00267 1087 aaKnown RBP33.51■■■□□ 2.96
BCR-202ENST00000359540 SHROOM4Q9ULL8 1493 aa33.21■■■□□ 2.91
BCR-202ENST00000359540 EHMT2Q96KQ7 1210 aa31.99■■■□□ 2.71
BCR-202ENST00000359540 PCGF6Q9BYE7 350 aa31.63■■■□□ 2.65
BCR-202ENST00000359540 FAM9AQ8IZU1 332 aaPredicted RBP31.45■■■□□ 2.63
BCR-202ENST00000359540 TTBK1Q5TCY1 1321 aaPredicted RBP30.93■■■□□ 2.54
BCR-202ENST00000359540 TRIM41Q8WV44 630 aa30.92■■■□□ 2.54
BCR-202ENST00000359540 CHIC1Q5VXU3 224 aa30.66■■■□□ 2.5
BCR-202ENST00000359540 APLP2Q06481 763 aa30.63■■■□□ 2.49
BCR-202ENST00000359540 LOC105371045A0A1W2PR82 267 aa30.52■■■□□ 2.48
BCR-202ENST00000359540 ZEB1P37275 1124 aaPredicted RBP30.5■■■□□ 2.47
BCR-202ENST00000359540 HRCP23327 699 aa30.48■■■□□ 2.47
BCR-202ENST00000359540 CCER1Q8TC90 406 aaPredicted RBP30.43■■■□□ 2.46
BCR-202ENST00000359540 PPARGC1BQ86YN6 1023 aaKnown RBP30.38■■■□□ 2.45
BCR-202ENST00000359540 RANGAP1P46060 587 aaPredicted RBP30.36■■■□□ 2.45
BCR-202ENST00000359540 TRIM26Q12899 539 aaPredicted RBP30.3■■■□□ 2.44
BCR-202ENST00000359540 UBTFP17480 764 aaKnown RBP30.21■■■□□ 2.43
BCR-202ENST00000359540 CENPBP07199 599 aaPredicted RBP30.04■■■□□ 2.4
BCR-202ENST00000359540 PELP1Q8IZL8 1130 aaKnown RBP30.02■■■□□ 2.4
BCR-202ENST00000359540 YTHDC1Q96MU7 727 aaKnown RBP29.74■■■□□ 2.35
BCR-202ENST00000359540 ATP1B4Q9UN42 357 aaPredicted RBP29.68■■■□□ 2.34
BCR-202ENST00000359540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.49■■■□□ 2.31
BCR-202ENST00000359540 ABCC9O60706 1549 aa29.42■■■□□ 2.3
BCR-202ENST00000359540 HNRNPUL2Q1KMD3 747 aaKnown RBP29.41■■■□□ 2.3
BCR-202ENST00000359540 ITGAEP38570 1179 aa29.24■■■□□ 2.27
BCR-202ENST00000359540 ZCCHC6Q5VYS8 1495 aaKnown RBP29.18■■■□□ 2.26
BCR-202ENST00000359540 DIEXFQ68CQ4 756 aaKnown RBP29.1■■■□□ 2.25
BCR-202ENST00000359540 PABPN1Q86U42 306 aaKnown RBP eCLIP29.03■■■□□ 2.24
BCR-202ENST00000359540 NEFLP07196 543 aa28.95■■■□□ 2.23
BCR-202ENST00000359540 ERICH6Q7L0X2 663 aa28.84■■■□□ 2.21
BCR-202ENST00000359540 MYO15BQ96JP2 1530 aa28.79■■■□□ 2.2
BCR-202ENST00000359540 CCDC180Q9P1Z9 1646 aa28.76■■■□□ 2.19
BCR-202ENST00000359540 DCAF1Q9Y4B6 1507 aa28.72■■■□□ 2.19
BCR-202ENST00000359540 GTF3C3Q9Y5Q9 886 aa28.65■■■□□ 2.18
BCR-202ENST00000359540 CSRNP3Q8WYN3 585 aa28.62■■■□□ 2.17
BCR-202ENST00000359540 SCRIBQ14160 1630 aa28.61■■■□□ 2.17
BCR-202ENST00000359540 MYT1Q01538 1121 aa28.57■■■□□ 2.16
BCR-202ENST00000359540 ZNF316A6NFI3 1004 aaPredicted RBP28.5■■■□□ 2.15
BCR-202ENST00000359540 FAM50AQ14320 339 aaKnown RBP28.49■■■□□ 2.15
BCR-202ENST00000359540 POLR3GLQ9BT43 218 aa28.44■■■□□ 2.14
BCR-202ENST00000359540 CNGB1Q14028 1251 aaPredicted RBP28.41■■■□□ 2.14
BCR-202ENST00000359540 ACIN1Q9UKV3 1341 aaKnown RBP28.41■■■□□ 2.14
BCR-202ENST00000359540 NEUROD1Q13562 356 aa28.38■■■□□ 2.13
BCR-202ENST00000359540 RSF1Q96T23 1441 aaPredicted RBP28.24■■■□□ 2.11
BCR-202ENST00000359540 BCANQ96GW7 911 aa28.15■■■□□ 2.1
BCR-202ENST00000359540 P3H3Q8IVL6 736 aa28.13■■■□□ 2.09
BCR-202ENST00000359540 TRIM52Q96A61 297 aa28.09■■■□□ 2.09
BCR-202ENST00000359540 SCAF1Q9H7N4 1312 aaKnown RBP27.99■■■□□ 2.07
BCR-202ENST00000359540 ANP32CO43423 234 aa27.94■■■□□ 2.06
BCR-202ENST00000359540 MYT1LQ9UL68 1186 aa27.92■■■□□ 2.06
BCR-202ENST00000359540 ARID3CA6NKF2 412 aa27.79■■■□□ 2.04
BCR-202ENST00000359540 MIER1Q8N108 512 aa27.77■■■□□ 2.04
BCR-202ENST00000359540 ZNF326Q5BKZ1 582 aaKnown RBP27.76■■■□□ 2.03
BCR-202ENST00000359540 CEP162Q5TB80 1403 aa27.74■■■□□ 2.03
BCR-202ENST00000359540 CLIP1P30622 1438 aa27.7■■■□□ 2.02
BCR-202ENST00000359540 CECR2Q9BXF3 1484 aa27.68■■■□□ 2.02
BCR-202ENST00000359540 DDX10Q13206 875 aaKnown RBP27.66■■■□□ 2.02
BCR-202ENST00000359540 RB1CC1Q8TDY2 1594 aa27.64■■■□□ 2.02
BCR-202ENST00000359540 FBLN2P98095 1184 aa27.64■■■□□ 2.02
BCR-202ENST00000359540 NACADO15069 1562 aa27.63■■■□□ 2.01
BCR-202ENST00000359540 DAXXQ9UER7 740 aaPredicted RBP27.62■■■□□ 2.01
BCR-202ENST00000359540 FKBP8Q14318 412 aa27.53■■■□□ 2
BCR-202ENST00000359540 CDK11AQ9UQ88 783 aaPredicted RBP27.51■■□□□ 1.99
BCR-202ENST00000359540 TNIKQ9UKE5 1360 aa27.51■■□□□ 1.99
BCR-202ENST00000359540 GOLGA3Q08378 1498 aa27.51■■□□□ 1.99
BCR-202ENST00000359540 EEA1Q15075 1411 aa27.5■■□□□ 1.99
BCR-202ENST00000359540 WRNQ14191 1432 aaPredicted RBP eCLIP27.48■■□□□ 1.994e-6■■□□□ 12.5
BCR-202ENST00000359540 TONSLQ96HA7 1378 aa27.47■■□□□ 1.99
BCR-202ENST00000359540 SLC4A1APQ9BWU0 796 aaKnown RBP27.44■■□□□ 1.98
BCR-202ENST00000359540 HIRIP3Q9BW71 556 aaPredicted RBP27.44■■□□□ 1.98
BCR-202ENST00000359540 ZNF777Q9ULD5 760 aaPredicted RBP27.39■■□□□ 1.98
BCR-202ENST00000359540 CHIC2Q9UKJ5 165 aa27.37■■□□□ 1.97
BCR-202ENST00000359540 SOGA1O94964 1423 aa27.37■■□□□ 1.97
BCR-202ENST00000359540 RTL5Q5HYW3 569 aaPredicted RBP27.36■■□□□ 1.97
BCR-202ENST00000359540 HNRNPUQ00839 825 aaKnown RBP eCLIP27.35■■□□□ 1.97
BCR-202ENST00000359540 CLSPNQ9HAW4 1339 aa27.34■■□□□ 1.97
BCR-202ENST00000359540 MROH2BQ7Z745 1585 aa27.31■■□□□ 1.96
BCR-202ENST00000359540 BAZ1AQ9NRL2 1556 aaPredicted RBP27.27■■□□□ 1.96
BCR-202ENST00000359540 CEP164Q9UPV0 1460 aa27.24■■□□□ 1.95
BCR-202ENST00000359540 FAM9BQ8IZU0 186 aa27.23■■□□□ 1.95
BCR-202ENST00000359540 MTUS2Q5JR59 1369 aa27.17■■□□□ 1.94
BCR-202ENST00000359540 BAZ1BQ9UIG0 1483 aaKnown RBP27.15■■□□□ 1.94
BCR-202ENST00000359540 CCDC88BA6NC98 1476 aa27.13■■□□□ 1.93
BCR-202ENST00000359540 ABCC8Q09428 1581 aa27.12■■□□□ 1.93
BCR-202ENST00000359540 RRP7BPQ9NSQ0 103 aa27.08■■□□□ 1.92
BCR-202ENST00000359540 IRX6P78412 446 aaPredicted RBP27.06■■□□□ 1.92
BCR-202ENST00000359540 SIN3AQ96ST3 1273 aa27.05■■□□□ 1.92
BCR-202ENST00000359540 KIF27Q86VH2 1401 aa27.05■■□□□ 1.92
BCR-202ENST00000359540 MRS2Q9HD23 443 aa26.99■■□□□ 1.91
BCR-202ENST00000359540 SALL2Q9Y467 1007 aaPredicted RBP26.99■■□□□ 1.91
BCR-202ENST00000359540 NPM2Q86SE8 214 aaKnown RBP26.94■■□□□ 1.9
BCR-202ENST00000359540 ANP32AP39687 249 aaKnown RBP26.92■■□□□ 1.9
BCR-202ENST00000359540 KANK4Q5T7N3 995 aaPredicted RBP26.92■■□□□ 1.9
BCR-202ENST00000359540 WIZO95785 1651 aa26.91■■□□□ 1.9
BCR-202ENST00000359540 EIF4G2P78344 907 aaKnown RBP eCLIP26.91■■□□□ 1.95e-9■■■□□ 14.9
BCR-202ENST00000359540 VPS8Q8N3P4 1428 aa26.89■■□□□ 1.89
BCR-202ENST00000359540 TMC1Q8TDI8 760 aa26.88■■□□□ 1.89
BCR-202ENST00000359540 CCNB3Q8WWL7 1395 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms