RNA–Protein interactions for RNA: ENST00000515881.5

DDR1-280, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-280ENST00000515881 NISCHQ9Y2I1 1504 aa48.38■■■■■ 5.34
DDR1-280ENST00000515881 CCDC180Q9P1Z9 1646 aa43.2■■■■■ 4.51
DDR1-280ENST00000515881 ABCC9O60706 1549 aa42.82■■■■■ 4.45
DDR1-280ENST00000515881 RB1CC1Q8TDY2 1594 aa40.94■■■■■ 4.14
DDR1-280ENST00000515881 NACADO15069 1562 aa40.78■■■■■ 4.12
DDR1-280ENST00000515881 DCAF8L2P0C7V8 631 aa40.64■■■■■ 4.1
DDR1-280ENST00000515881 MYO15BQ96JP2 1530 aa40.37■■■■■ 4.05
DDR1-280ENST00000515881 ZCCHC6Q5VYS8 1495 aaKnown RBP40.21■■■■■ 4.03
DDR1-280ENST00000515881 DCAF1Q9Y4B6 1507 aa40.01■■■■■ 4
DDR1-280ENST00000515881 PABPN1Q86U42 306 aaKnown RBP eCLIP39.94■■■■□ 3.98
DDR1-280ENST00000515881 UNC13AQ9UPW8 1703 aa39.9■■■■□ 3.98
DDR1-280ENST00000515881 DNAJC5BQ9UF47 199 aa39.79■■■■□ 3.96
DDR1-280ENST00000515881 BICRAQ9NZM4 1560 aa39.72■■■■□ 3.95
DDR1-280ENST00000515881 SCRIBQ14160 1630 aa39.4■■■■□ 3.9
DDR1-280ENST00000515881 SHROOM4Q9ULL8 1493 aa39.29■■■■□ 3.88
DDR1-280ENST00000515881 EIF4G1Q04637 1599 aaKnown RBP38.72■■■■□ 3.79
DDR1-280ENST00000515881 CC2D2AQ9P2K1 1620 aa38.68■■■■□ 3.78
DDR1-280ENST00000515881 CECR2Q9BXF3 1484 aa38.54■■■■□ 3.76
DDR1-280ENST00000515881 NCAPD3P42695 1498 aa37.66■■■■□ 3.62
DDR1-280ENST00000515881 SMARCA4P51532 1647 aa37.63■■■■□ 3.61
DDR1-280ENST00000515881 ATAD2BQ9ULI0 1458 aa37.59■■■■□ 3.61
DDR1-280ENST00000515881 BAZ1AQ9NRL2 1556 aaPredicted RBP37.53■■■■□ 3.6
DDR1-280ENST00000515881 SMARCA2P51531 1590 aa37.51■■■■□ 3.59
DDR1-280ENST00000515881 HMGXB3Q12766 1538 aa37.41■■■■□ 3.58
DDR1-280ENST00000515881 MROH2BQ7Z745 1585 aa37.29■■■■□ 3.56
DDR1-280ENST00000515881 PEG3Q9GZU2 1588 aa37.29■■■■□ 3.56
DDR1-280ENST00000515881 BAZ1BQ9UIG0 1483 aaKnown RBP37.25■■■■□ 3.55
DDR1-280ENST00000515881 ERCC6Q03468 1493 aa36.95■■■■□ 3.51
DDR1-280ENST00000515881 NESP48681 1621 aa36.9■■■■□ 3.5
DDR1-280ENST00000515881 WIZO95785 1651 aa36.82■■■■□ 3.48
DDR1-280ENST00000515881 CUX2O14529 1486 aa36.75■■■■□ 3.47
DDR1-280ENST00000515881 LAMC3Q9Y6N6 1575 aa36.71■■■■□ 3.47
DDR1-280ENST00000515881 RSF1Q96T23 1441 aaPredicted RBP36.68■■■■□ 3.46
DDR1-280ENST00000515881 CADPSQ9ULU8 1353 aa36.53■■■■□ 3.44
DDR1-280ENST00000515881 PDS5BQ9NTI5 1447 aa36.51■■■■□ 3.44
DDR1-280ENST00000515881 TOP2AP11388 1531 aaKnown RBP36.44■■■■□ 3.42
DDR1-280ENST00000515881 THOC2Q8NI27 1593 aaKnown RBP36.43■■■■□ 3.42
DDR1-280ENST00000515881 KIF21AQ7Z4S6 1674 aa36.38■■■■□ 3.41
DDR1-280ENST00000515881 DNAJC5Q9H3Z4 198 aa36.24■■■■□ 3.39
DDR1-280ENST00000515881 CFTRP13569 1480 aa36.21■■■■□ 3.39
DDR1-280ENST00000515881 MRC2Q9UBG0 1479 aa36.17■■■■□ 3.38
DDR1-280ENST00000515881 FANCD2Q9BXW9 1451 aa36.11■■■■□ 3.37
DDR1-280ENST00000515881 CEP164Q9UPV0 1460 aa36.11■■■■□ 3.37
DDR1-280ENST00000515881 WDR62O43379 1518 aa36.06■■■■□ 3.36
DDR1-280ENST00000515881 CCDC88BA6NC98 1476 aa36.01■■■■□ 3.36
DDR1-280ENST00000515881 URB2Q14146 1524 aaKnown RBP35.78■■■■□ 3.32
DDR1-280ENST00000515881 PRDM2Q13029 1718 aa35.76■■■■□ 3.31
DDR1-280ENST00000515881 TOPBP1Q92547 1522 aa35.47■■■■□ 3.27
DDR1-280ENST00000515881 ABCC8Q09428 1581 aa35.42■■■■□ 3.26
DDR1-280ENST00000515881 IFT140Q96RY7 1462 aa35.38■■■■□ 3.25
DDR1-280ENST00000515881 DNMBPQ6XZF7 1577 aa35.37■■■■□ 3.25
DDR1-280ENST00000515881 SUPT5HO00267 1087 aaKnown RBP35.36■■■■□ 3.25
DDR1-280ENST00000515881 ZNF608Q9ULD9 1512 aaPredicted RBP35.27■■■■□ 3.24
DDR1-280ENST00000515881 OSCARQ8IYS5 282 aa35.14■■■■□ 3.22
DDR1-280ENST00000515881 POLA1P09884 1462 aaPredicted RBP35.14■■■■□ 3.22
DDR1-280ENST00000515881 TARBP1Q13395 1621 aaKnown RBP35.1■■■■□ 3.21
DDR1-280ENST00000515881 EIF4G3O43432 1585 aaKnown RBP35.08■■■■□ 3.21
DDR1-280ENST00000515881 CUX1P39880 1505 aa35.01■■■■□ 3.19
DDR1-280ENST00000515881 AQRO60306 1485 aaKnown RBP eCLIP35■■■■□ 3.192e-7■■■■■ 31.6
DDR1-280ENST00000515881 RAD54L2Q9Y4B4 1467 aa34.99■■■■□ 3.19
DDR1-280ENST00000515881 SOGA1O94964 1423 aa34.98■■■■□ 3.19
DDR1-280ENST00000515881 FGD5Q6ZNL6 1462 aa34.98■■■■□ 3.19
DDR1-280ENST00000515881 TDRD9Q8NDG6 1382 aaKnown RBP34.87■■■■□ 3.17
DDR1-280ENST00000515881 TRIM41Q8WV44 630 aa34.82■■■■□ 3.16
DDR1-280ENST00000515881 WDR97A6NE52 1622 aa34.78■■■■□ 3.16
DDR1-280ENST00000515881 FBLN2P98095 1184 aa34.68■■■■□ 3.14
DDR1-280ENST00000515881 CHD1O14646 1710 aa34.67■■■■□ 3.14
DDR1-280ENST00000515881 SNAPC4Q5SXM2 1469 aa34.66■■■■□ 3.14
DDR1-280ENST00000515881 GRIN2BQ13224 1484 aa34.65■■■■□ 3.14
DDR1-280ENST00000515881 ABCA10Q8WWZ4 1543 aa34.6■■■■□ 3.13
DDR1-280ENST00000515881 WRNQ14191 1432 aaPredicted RBP eCLIP34.6■■■■□ 3.13
DDR1-280ENST00000515881 RIMBP3CA6NJZ7 1639 aa34.59■■■■□ 3.13
DDR1-280ENST00000515881 RIMBP3BA6NNM3 1639 aa34.59■■■■□ 3.13
DDR1-280ENST00000515881 RIMBP3Q9UFD9 1639 aa34.59■■■■□ 3.13
DDR1-280ENST00000515881 MAGI1Q96QZ7 1491 aaPredicted RBP34.59■■■■□ 3.13
DDR1-280ENST00000515881 GAPVD1Q14C86 1478 aa34.57■■■■□ 3.12
DDR1-280ENST00000515881 ARHGEF11O15085 1522 aa34.56■■■■□ 3.12
DDR1-280ENST00000515881 TOP2BQ02880 1626 aa34.55■■■■□ 3.12
DDR1-280ENST00000515881 BIVM-ERCC5R4GMW8 1640 aa34.53■■■■□ 3.12
DDR1-280ENST00000515881 SYNJ1O43426 1573 aa34.52■■■■□ 3.12
DDR1-280ENST00000515881 CHMP7Q8WUX9 453 aaPredicted RBP34.51■■■■□ 3.12
DDR1-280ENST00000515881 ABCA5Q8WWZ7 1642 aa34.49■■■■□ 3.11
DDR1-280ENST00000515881 SYNJ2O15056 1496 aa34.48■■■■□ 3.11
DDR1-280ENST00000515881 PBRM1Q86U86 1689 aa34.45■■■■□ 3.11
DDR1-280ENST00000515881 CLASP1Q7Z460 1538 aa34.37■■■■□ 3.09
DDR1-280ENST00000515881 CYB5RLQ6IPT4 315 aa34.28■■■■□ 3.08
DDR1-280ENST00000515881 ARAP1Q96P48 1450 aa34.27■■■■□ 3.08
DDR1-280ENST00000515881 ADAMTS12P58397 1594 aa34.21■■■■□ 3.07
DDR1-280ENST00000515881 GRIN2AQ12879 1464 aa34.2■■■■□ 3.06
DDR1-280ENST00000515881 ERICH3Q5RHP9 1530 aa34.18■■■■□ 3.06
DDR1-280ENST00000515881 FHAD1B1AJZ9 1412 aa34.16■■■■□ 3.06
DDR1-280ENST00000515881 NUP160Q12769 1436 aa34.07■■■■□ 3.04
DDR1-280ENST00000515881 CEP170Q5SW79 1584 aa34.03■■■■□ 3.04
DDR1-280ENST00000515881 KIF27Q86VH2 1401 aa33.92■■■■□ 3.02
DDR1-280ENST00000515881 IGF1RP08069 1367 aa33.85■■■■□ 3.01
DDR1-280ENST00000515881 ERCC6L2Q5T890 1561 aa33.85■■■■□ 3.01
DDR1-280ENST00000515881 SHROOM2Q13796 1616 aa33.83■■■■□ 3.01
DDR1-280ENST00000515881 TRHP20396 242 aaPredicted RBP33.75■■■□□ 2.99
DDR1-280ENST00000515881 CUL7Q14999 1698 aa33.74■■■□□ 2.99
DDR1-280ENST00000515881 RUSC2Q8N2Y8 1516 aa33.73■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms