RNA–Protein interactions for RNA: ENST00000528575.1

YIF1A-212, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 3

Gene YIF1A, Length 532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-212ENST00000528575 NISCHQ9Y2I1 1504 aa45.97■■■■■ 4.95
YIF1A-212ENST00000528575 CCDC180Q9P1Z9 1646 aa41.13■■■■■ 4.17
YIF1A-212ENST00000528575 ABCC9O60706 1549 aa41.05■■■■■ 4.16
YIF1A-212ENST00000528575 RB1CC1Q8TDY2 1594 aa39.04■■■■□ 3.84
YIF1A-212ENST00000528575 NACADO15069 1562 aa38.82■■■■□ 3.81
YIF1A-212ENST00000528575 DNAJC5BQ9UF47 199 aa38.59■■■■□ 3.77
YIF1A-212ENST00000528575 DCAF8L2P0C7V8 631 aa38.51■■■■□ 3.76
YIF1A-212ENST00000528575 MYO15BQ96JP2 1530 aa38.38■■■■□ 3.74
YIF1A-212ENST00000528575 UNC13AQ9UPW8 1703 aa38.35■■■■□ 3.73
YIF1A-212ENST00000528575 PABPN1Q86U42 306 aaKnown RBP eCLIP38.24■■■■□ 3.71
YIF1A-212ENST00000528575 ZCCHC6Q5VYS8 1495 aaKnown RBP38.15■■■■□ 3.7
YIF1A-212ENST00000528575 BICRAQ9NZM4 1560 aa38.14■■■■□ 3.7
YIF1A-212ENST00000528575 DCAF1Q9Y4B6 1507 aa37.95■■■■□ 3.67
YIF1A-212ENST00000528575 SCRIBQ14160 1630 aa37.54■■■■□ 3.6
YIF1A-212ENST00000528575 SHROOM4Q9ULL8 1493 aa37.39■■■■□ 3.58
YIF1A-212ENST00000528575 CC2D2AQ9P2K1 1620 aa37.12■■■■□ 3.53
YIF1A-212ENST00000528575 EIF4G1Q04637 1599 aaKnown RBP37.07■■■■□ 3.52
YIF1A-212ENST00000528575 CECR2Q9BXF3 1484 aa36.94■■■■□ 3.5
YIF1A-212ENST00000528575 NCAPD3P42695 1498 aa35.91■■■■□ 3.34
YIF1A-212ENST00000528575 ATAD2BQ9ULI0 1458 aa35.85■■■■□ 3.33
YIF1A-212ENST00000528575 SMARCA4P51532 1647 aa35.83■■■■□ 3.33
YIF1A-212ENST00000528575 HMGXB3Q12766 1538 aa35.63■■■■□ 3.29
YIF1A-212ENST00000528575 SMARCA2P51531 1590 aa35.63■■■■□ 3.29
YIF1A-212ENST00000528575 BAZ1AQ9NRL2 1556 aaPredicted RBP35.59■■■■□ 3.29
YIF1A-212ENST00000528575 PEG3Q9GZU2 1588 aa35.51■■■■□ 3.28
YIF1A-212ENST00000528575 MROH2BQ7Z745 1585 aa35.48■■■■□ 3.27
YIF1A-212ENST00000528575 BAZ1BQ9UIG0 1483 aaKnown RBP35.41■■■■□ 3.26
YIF1A-212ENST00000528575 NESP48681 1621 aa35.39■■■■□ 3.26
YIF1A-212ENST00000528575 ERCC6Q03468 1493 aa35.28■■■■□ 3.24
YIF1A-212ENST00000528575 CUX2O14529 1486 aa35.25■■■■□ 3.23
YIF1A-212ENST00000528575 DNAJC5Q9H3Z4 198 aa35.14■■■■□ 3.22
YIF1A-212ENST00000528575 WIZO95785 1651 aa35.05■■■■□ 3.2
YIF1A-212ENST00000528575 LAMC3Q9Y6N6 1575 aa35.01■■■■□ 3.2
YIF1A-212ENST00000528575 THOC2Q8NI27 1593 aaKnown RBP35■■■■□ 3.19
YIF1A-212ENST00000528575 KIF21AQ7Z4S6 1674 aa34.89■■■■□ 3.18
YIF1A-212ENST00000528575 CADPSQ9ULU8 1353 aa34.78■■■■□ 3.16
YIF1A-212ENST00000528575 RSF1Q96T23 1441 aaPredicted RBP34.76■■■■□ 3.16
YIF1A-212ENST00000528575 PDS5BQ9NTI5 1447 aa34.73■■■■□ 3.15
YIF1A-212ENST00000528575 TOP2AP11388 1531 aaKnown RBP34.55■■■■□ 3.12
YIF1A-212ENST00000528575 MRC2Q9UBG0 1479 aa34.52■■■■□ 3.12
YIF1A-212ENST00000528575 WDR62O43379 1518 aa34.5■■■■□ 3.11
YIF1A-212ENST00000528575 CFTRP13569 1480 aa34.46■■■■□ 3.11
YIF1A-212ENST00000528575 FANCD2Q9BXW9 1451 aa34.39■■■■□ 3.1
YIF1A-212ENST00000528575 CEP164Q9UPV0 1460 aa34.36■■■■□ 3.09
YIF1A-212ENST00000528575 URB2Q14146 1524 aaKnown RBP34.21■■■■□ 3.07
YIF1A-212ENST00000528575 CCDC88BA6NC98 1476 aa34.2■■■■□ 3.06
YIF1A-212ENST00000528575 PRDM2Q13029 1718 aa34.08■■■■□ 3.05
YIF1A-212ENST00000528575 TOPBP1Q92547 1522 aa33.8■■■■□ 3
YIF1A-212ENST00000528575 ZNF608Q9ULD9 1512 aaPredicted RBP33.78■■■■□ 3
YIF1A-212ENST00000528575 IFT140Q96RY7 1462 aa33.69■■■□□ 2.98
YIF1A-212ENST00000528575 DNMBPQ6XZF7 1577 aa33.64■■■□□ 2.98
YIF1A-212ENST00000528575 OSCARQ8IYS5 282 aa33.59■■■□□ 2.97
YIF1A-212ENST00000528575 ABCC8Q09428 1581 aa33.55■■■□□ 2.96
YIF1A-212ENST00000528575 TRIM41Q8WV44 630 aa33.55■■■□□ 2.96
YIF1A-212ENST00000528575 TARBP1Q13395 1621 aaKnown RBP33.54■■■□□ 2.96
YIF1A-212ENST00000528575 EIF4G3O43432 1585 aaKnown RBP33.53■■■□□ 2.96
YIF1A-212ENST00000528575 SUPT5HO00267 1087 aaKnown RBP33.49■■■□□ 2.95
YIF1A-212ENST00000528575 POLA1P09884 1462 aaPredicted RBP33.47■■■□□ 2.95
YIF1A-212ENST00000528575 AQRO60306 1485 aaKnown RBP eCLIP33.42■■■□□ 2.942e-6■■■■□ 20
YIF1A-212ENST00000528575 RAD54L2Q9Y4B4 1467 aa33.37■■■□□ 2.93
YIF1A-212ENST00000528575 CUX1P39880 1505 aa33.32■■■□□ 2.92
YIF1A-212ENST00000528575 RIMBP3CA6NJZ7 1639 aa33.31■■■□□ 2.92
YIF1A-212ENST00000528575 RIMBP3BA6NNM3 1639 aa33.31■■■□□ 2.92
YIF1A-212ENST00000528575 RIMBP3Q9UFD9 1639 aa33.31■■■□□ 2.92
YIF1A-212ENST00000528575 FGD5Q6ZNL6 1462 aa33.26■■■□□ 2.92
YIF1A-212ENST00000528575 CHD1O14646 1710 aa33.25■■■□□ 2.91
YIF1A-212ENST00000528575 SOGA1O94964 1423 aa33.23■■■□□ 2.91
YIF1A-212ENST00000528575 TDRD9Q8NDG6 1382 aaKnown RBP33.21■■■□□ 2.91
YIF1A-212ENST00000528575 ARHGEF11O15085 1522 aa33.2■■■□□ 2.91
YIF1A-212ENST00000528575 WDR97A6NE52 1622 aa33.09■■■□□ 2.89
YIF1A-212ENST00000528575 SNAPC4Q5SXM2 1469 aa33.05■■■□□ 2.88
YIF1A-212ENST00000528575 FBLN2P98095 1184 aa32.97■■■□□ 2.87
YIF1A-212ENST00000528575 ARAP1Q96P48 1450 aa32.93■■■□□ 2.86
YIF1A-212ENST00000528575 GRIN2BQ13224 1484 aa32.93■■■□□ 2.86
YIF1A-212ENST00000528575 CLASP1Q7Z460 1538 aa32.92■■■□□ 2.86
YIF1A-212ENST00000528575 MAGI1Q96QZ7 1491 aaPredicted RBP32.92■■■□□ 2.86
YIF1A-212ENST00000528575 ABCA10Q8WWZ4 1543 aa32.88■■■□□ 2.85
YIF1A-212ENST00000528575 ABCA5Q8WWZ7 1642 aa32.88■■■□□ 2.85
YIF1A-212ENST00000528575 PBRM1Q86U86 1689 aa32.86■■■□□ 2.85
YIF1A-212ENST00000528575 CYB5RLQ6IPT4 315 aa32.84■■■□□ 2.85
YIF1A-212ENST00000528575 GAPVD1Q14C86 1478 aa32.84■■■□□ 2.85
YIF1A-212ENST00000528575 SYNJ2O15056 1496 aa32.82■■■□□ 2.84
YIF1A-212ENST00000528575 SYNJ1O43426 1573 aa32.79■■■□□ 2.84
YIF1A-212ENST00000528575 BIVM-ERCC5R4GMW8 1640 aa32.77■■■□□ 2.84
YIF1A-212ENST00000528575 CHMP7Q8WUX9 453 aaPredicted RBP32.76■■■□□ 2.83
YIF1A-212ENST00000528575 TOP2BQ02880 1626 aa32.75■■■□□ 2.83
YIF1A-212ENST00000528575 WRNQ14191 1432 aaPredicted RBP eCLIP32.68■■■□□ 2.82
YIF1A-212ENST00000528575 ADAMTS12P58397 1594 aa32.59■■■□□ 2.81
YIF1A-212ENST00000528575 GRIN2AQ12879 1464 aa32.55■■■□□ 2.8
YIF1A-212ENST00000528575 CEP170Q5SW79 1584 aa32.51■■■□□ 2.79
YIF1A-212ENST00000528575 ERCC6L2Q5T890 1561 aa32.5■■■□□ 2.79
YIF1A-212ENST00000528575 NUP160Q12769 1436 aa32.49■■■□□ 2.79
YIF1A-212ENST00000528575 ERICH3Q5RHP9 1530 aa32.43■■■□□ 2.78
YIF1A-212ENST00000528575 FHAD1B1AJZ9 1412 aa32.42■■■□□ 2.78
YIF1A-212ENST00000528575 SHROOM2Q13796 1616 aa32.36■■■□□ 2.77
YIF1A-212ENST00000528575 TRHP20396 242 aaPredicted RBP32.31■■■□□ 2.76
YIF1A-212ENST00000528575 RUSC2Q8N2Y8 1516 aa32.15■■■□□ 2.74
YIF1A-212ENST00000528575 IGF1RP08069 1367 aa32.11■■■□□ 2.73
YIF1A-212ENST00000528575 PRG4Q92954 1404 aaPredicted RBP32.09■■■□□ 2.73
YIF1A-212ENST00000528575 JPH4Q96JJ6 628 aa32.04■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms