RNA–Protein interactions for RNA: ENST00000514023.5

SLC41A3-219, Transcript of solute carrier family 41 member 3, humanhuman

TSL 4

Gene SLC41A3, Length 652 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC41A3-219ENST00000514023 NISCHQ9Y2I1 1504 aa40.91■■■■■ 4.14
SLC41A3-219ENST00000514023 CCDC180Q9P1Z9 1646 aa36.43■■■■□ 3.42
SLC41A3-219ENST00000514023 ABCC9O60706 1549 aa36.26■■■■□ 3.4
SLC41A3-219ENST00000514023 RB1CC1Q8TDY2 1594 aa34.53■■■■□ 3.12
SLC41A3-219ENST00000514023 DCAF8L2P0C7V8 631 aa34.4■■■■□ 3.1
SLC41A3-219ENST00000514023 NACADO15069 1562 aa34.4■■■■□ 3.1
SLC41A3-219ENST00000514023 MYO15BQ96JP2 1530 aa34.04■■■■□ 3.04
SLC41A3-219ENST00000514023 ZCCHC6Q5VYS8 1495 aaKnown RBP33.99■■■■□ 3.03
SLC41A3-219ENST00000514023 PABPN1Q86U42 306 aaKnown RBP eCLIP33.87■■■■□ 3.01
SLC41A3-219ENST00000514023 DNAJC5BQ9UF47 199 aa33.83■■■■□ 3.01
SLC41A3-219ENST00000514023 UNC13AQ9UPW8 1703 aa33.77■■■■□ 3
SLC41A3-219ENST00000514023 DCAF1Q9Y4B6 1507 aa33.75■■■□□ 2.99
SLC41A3-219ENST00000514023 BICRAQ9NZM4 1560 aa33.64■■■□□ 2.98
SLC41A3-219ENST00000514023 SCRIBQ14160 1630 aa33.33■■■□□ 2.93
SLC41A3-219ENST00000514023 SHROOM4Q9ULL8 1493 aa33.07■■■□□ 2.88
SLC41A3-219ENST00000514023 EIF4G1Q04637 1599 aaKnown RBP32.74■■■□□ 2.83
SLC41A3-219ENST00000514023 CC2D2AQ9P2K1 1620 aa32.71■■■□□ 2.83
SLC41A3-219ENST00000514023 CECR2Q9BXF3 1484 aa32.59■■■□□ 2.81
SLC41A3-219ENST00000514023 NCAPD3P42695 1498 aa31.82■■■□□ 2.68
SLC41A3-219ENST00000514023 SMARCA4P51532 1647 aa31.81■■■□□ 2.68
SLC41A3-219ENST00000514023 ATAD2BQ9ULI0 1458 aa31.8■■■□□ 2.68
SLC41A3-219ENST00000514023 BAZ1AQ9NRL2 1556 aaPredicted RBP31.67■■■□□ 2.66
SLC41A3-219ENST00000514023 SMARCA2P51531 1590 aa31.64■■■□□ 2.65
SLC41A3-219ENST00000514023 MROH2BQ7Z745 1585 aa31.58■■■□□ 2.65
SLC41A3-219ENST00000514023 HMGXB3Q12766 1538 aa31.56■■■□□ 2.64
SLC41A3-219ENST00000514023 PEG3Q9GZU2 1588 aa31.49■■■□□ 2.63
SLC41A3-219ENST00000514023 BAZ1BQ9UIG0 1483 aaKnown RBP31.46■■■□□ 2.63
SLC41A3-219ENST00000514023 NESP48681 1621 aa31.28■■■□□ 2.6
SLC41A3-219ENST00000514023 ERCC6Q03468 1493 aa31.19■■■□□ 2.58
SLC41A3-219ENST00000514023 WIZO95785 1651 aa31.17■■■□□ 2.58
SLC41A3-219ENST00000514023 RSF1Q96T23 1441 aaPredicted RBP31.06■■■□□ 2.56
SLC41A3-219ENST00000514023 CUX2O14529 1486 aa31■■■□□ 2.55
SLC41A3-219ENST00000514023 LAMC3Q9Y6N6 1575 aa30.97■■■□□ 2.55
SLC41A3-219ENST00000514023 CADPSQ9ULU8 1353 aa30.88■■■□□ 2.53
SLC41A3-219ENST00000514023 THOC2Q8NI27 1593 aaKnown RBP30.81■■■□□ 2.52
SLC41A3-219ENST00000514023 PDS5BQ9NTI5 1447 aa30.8■■■□□ 2.52
SLC41A3-219ENST00000514023 KIF21AQ7Z4S6 1674 aa30.78■■■□□ 2.52
SLC41A3-219ENST00000514023 TOP2AP11388 1531 aaKnown RBP30.78■■■□□ 2.52
SLC41A3-219ENST00000514023 DNAJC5Q9H3Z4 198 aa30.67■■■□□ 2.5
SLC41A3-219ENST00000514023 CFTRP13569 1480 aa30.6■■■□□ 2.49
SLC41A3-219ENST00000514023 MRC2Q9UBG0 1479 aa30.55■■■□□ 2.48
SLC41A3-219ENST00000514023 FANCD2Q9BXW9 1451 aa30.51■■■□□ 2.48
SLC41A3-219ENST00000514023 CCDC88BA6NC98 1476 aa30.49■■■□□ 2.47
SLC41A3-219ENST00000514023 CEP164Q9UPV0 1460 aa30.48■■■□□ 2.47
SLC41A3-219ENST00000514023 WDR62O43379 1518 aa30.47■■■□□ 2.47
SLC41A3-219ENST00000514023 URB2Q14146 1524 aaKnown RBP30.29■■■□□ 2.44
SLC41A3-219ENST00000514023 PRDM2Q13029 1718 aa30.16■■■□□ 2.42
SLC41A3-219ENST00000514023 TOPBP1Q92547 1522 aa29.99■■■□□ 2.39
SLC41A3-219ENST00000514023 SUPT5HO00267 1087 aaKnown RBP29.95■■■□□ 2.39
SLC41A3-219ENST00000514023 ZNF608Q9ULD9 1512 aaPredicted RBP29.88■■■□□ 2.37
SLC41A3-219ENST00000514023 IFT140Q96RY7 1462 aa29.87■■■□□ 2.37
SLC41A3-219ENST00000514023 DNMBPQ6XZF7 1577 aa29.86■■■□□ 2.37
SLC41A3-219ENST00000514023 ABCC8Q09428 1581 aa29.84■■■□□ 2.37
SLC41A3-219ENST00000514023 POLA1P09884 1462 aaPredicted RBP29.72■■■□□ 2.35
SLC41A3-219ENST00000514023 TARBP1Q13395 1621 aaKnown RBP29.69■■■□□ 2.34
SLC41A3-219ENST00000514023 OSCARQ8IYS5 282 aa29.68■■■□□ 2.34
SLC41A3-219ENST00000514023 AQRO60306 1485 aaKnown RBP eCLIP29.65■■■□□ 2.34
SLC41A3-219ENST00000514023 RAD54L2Q9Y4B4 1467 aa29.65■■■□□ 2.34
SLC41A3-219ENST00000514023 EIF4G3O43432 1585 aaKnown RBP29.64■■■□□ 2.34
SLC41A3-219ENST00000514023 CUX1P39880 1505 aa29.63■■■□□ 2.33
SLC41A3-219ENST00000514023 FGD5Q6ZNL6 1462 aa29.58■■■□□ 2.33
SLC41A3-219ENST00000514023 SOGA1O94964 1423 aa29.57■■■□□ 2.32
SLC41A3-219ENST00000514023 TDRD9Q8NDG6 1382 aaKnown RBP29.52■■■□□ 2.32
SLC41A3-219ENST00000514023 TRIM41Q8WV44 630 aa29.49■■■□□ 2.31
SLC41A3-219ENST00000514023 FBLN2P98095 1184 aa29.33■■■□□ 2.29
SLC41A3-219ENST00000514023 CHD1O14646 1710 aa29.32■■■□□ 2.28
SLC41A3-219ENST00000514023 SNAPC4Q5SXM2 1469 aa29.31■■■□□ 2.28
SLC41A3-219ENST00000514023 WDR97A6NE52 1622 aa29.29■■■□□ 2.28
SLC41A3-219ENST00000514023 RIMBP3CA6NJZ7 1639 aa29.26■■■□□ 2.27
SLC41A3-219ENST00000514023 RIMBP3BA6NNM3 1639 aa29.26■■■□□ 2.27
SLC41A3-219ENST00000514023 RIMBP3Q9UFD9 1639 aa29.26■■■□□ 2.27
SLC41A3-219ENST00000514023 GRIN2BQ13224 1484 aa29.25■■■□□ 2.27
SLC41A3-219ENST00000514023 ABCA10Q8WWZ4 1543 aa29.24■■■□□ 2.27
SLC41A3-219ENST00000514023 WRNQ14191 1432 aaPredicted RBP eCLIP29.23■■■□□ 2.27
SLC41A3-219ENST00000514023 SYNJ1O43426 1573 aa29.22■■■□□ 2.27
SLC41A3-219ENST00000514023 ARHGEF11O15085 1522 aa29.22■■■□□ 2.27
SLC41A3-219ENST00000514023 GAPVD1Q14C86 1478 aa29.2■■■□□ 2.26
SLC41A3-219ENST00000514023 MAGI1Q96QZ7 1491 aaPredicted RBP29.19■■■□□ 2.26
SLC41A3-219ENST00000514023 TOP2BQ02880 1626 aa29.18■■■□□ 2.26
SLC41A3-219ENST00000514023 BIVM-ERCC5R4GMW8 1640 aa29.16■■■□□ 2.26
SLC41A3-219ENST00000514023 ABCA5Q8WWZ7 1642 aa29.16■■■□□ 2.26
SLC41A3-219ENST00000514023 CHMP7Q8WUX9 453 aaPredicted RBP29.15■■■□□ 2.26
SLC41A3-219ENST00000514023 SYNJ2O15056 1496 aa29.11■■■□□ 2.25
SLC41A3-219ENST00000514023 PBRM1Q86U86 1689 aa29.1■■■□□ 2.25
SLC41A3-219ENST00000514023 CLASP1Q7Z460 1538 aa29.05■■■□□ 2.24
SLC41A3-219ENST00000514023 CYB5RLQ6IPT4 315 aa29.02■■■□□ 2.24
SLC41A3-219ENST00000514023 ARAP1Q96P48 1450 aa29■■■□□ 2.23
SLC41A3-219ENST00000514023 ADAMTS12P58397 1594 aa28.91■■■□□ 2.22
SLC41A3-219ENST00000514023 GRIN2AQ12879 1464 aa28.89■■■□□ 2.22
SLC41A3-219ENST00000514023 FHAD1B1AJZ9 1412 aa28.85■■■□□ 2.21
SLC41A3-219ENST00000514023 ERICH3Q5RHP9 1530 aa28.84■■■□□ 2.21
SLC41A3-219ENST00000514023 NUP160Q12769 1436 aa28.8■■■□□ 2.2
SLC41A3-219ENST00000514023 CEP170Q5SW79 1584 aa28.79■■■□□ 2.2
SLC41A3-219ENST00000514023 ERCC6L2Q5T890 1561 aa28.71■■■□□ 2.19
SLC41A3-219ENST00000514023 IGF1RP08069 1367 aa28.66■■■□□ 2.18
SLC41A3-219ENST00000514023 KIF27Q86VH2 1401 aa28.62■■■□□ 2.17
SLC41A3-219ENST00000514023 SHROOM2Q13796 1616 aa28.59■■■□□ 2.17
SLC41A3-219ENST00000514023 TRHP20396 242 aaPredicted RBP28.53■■■□□ 2.16
SLC41A3-219ENST00000514023 JPH4Q96JJ6 628 aa28.51■■■□□ 2.15
SLC41A3-219ENST00000514023 PRG4Q92954 1404 aaPredicted RBP28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 383.1 ms