RNA–Protein interactions for RNA: ENST00000529861.5

CTSH-210, Transcript of cathepsin H, human

TSL 3

Gene CTSH, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSH-210	ENST00000529861	NISCH	Q9Y2I1	1504 aa		43.42	■■■■■ 4.54
CTSH-210	ENST00000529861	CCDC180	Q9P1Z9	1646 aa		38.69	■■■■□ 3.78
CTSH-210	ENST00000529861	ABCC9	O60706	1549 aa		38.57	■■■■□ 3.76
CTSH-210	ENST00000529861	RB1CC1	Q8TDY2	1594 aa		36.7	■■■■□ 3.47
CTSH-210	ENST00000529861	NACAD	O15069	1562 aa		36.53	■■■■□ 3.44
CTSH-210	ENST00000529861	DCAF8L2	P0C7V8	631 aa		36.43	■■■■□ 3.42
CTSH-210	ENST00000529861	DNAJC5B	Q9UF47	199 aa		36.16	■■■■□ 3.38
CTSH-210	ENST00000529861	MYO15B	Q96JP2	1530 aa		36.13	■■■■□ 3.38
CTSH-210	ENST00000529861	ZCCHC6	Q5VYS8	1495 aa	Known RBP	36.1	■■■■□ 3.37
CTSH-210	ENST00000529861	UNC13A	Q9UPW8	1703 aa		36.01	■■■■□ 3.36
CTSH-210	ENST00000529861	PABPN1	Q86U42	306 aa	Known RBP eCLIP	36	■■■■□ 3.35
CTSH-210	ENST00000529861	DCAF1	Q9Y4B6	1507 aa		35.9	■■■■□ 3.34
CTSH-210	ENST00000529861	BICRA	Q9NZM4	1560 aa		35.81	■■■■□ 3.32
CTSH-210	ENST00000529861	SCRIB	Q14160	1630 aa		35.35	■■■■□ 3.25
CTSH-210	ENST00000529861	SHROOM4	Q9ULL8	1493 aa		35.13	■■■■□ 3.21
CTSH-210	ENST00000529861	CC2D2A	Q9P2K1	1620 aa		34.84	■■■■□ 3.17
CTSH-210	ENST00000529861	EIF4G1	Q04637	1599 aa	Known RBP	34.82	■■■■□ 3.16
CTSH-210	ENST00000529861	CECR2	Q9BXF3	1484 aa		34.68	■■■■□ 3.14
CTSH-210	ENST00000529861	NCAPD3	P42695	1498 aa		33.8	■■■■□ 3
CTSH-210	ENST00000529861	ATAD2B	Q9ULI0	1458 aa		33.76	■■■□□ 2.99
CTSH-210	ENST00000529861	SMARCA4	P51532	1647 aa		33.75	■■■□□ 2.99
CTSH-210	ENST00000529861	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	33.64	■■■□□ 2.98
CTSH-210	ENST00000529861	SMARCA2	P51531	1590 aa		33.55	■■■□□ 2.96
CTSH-210	ENST00000529861	HMGXB3	Q12766	1538 aa		33.52	■■■□□ 2.96
CTSH-210	ENST00000529861	MROH2B	Q7Z745	1585 aa		33.47	■■■□□ 2.95
CTSH-210	ENST00000529861	PEG3	Q9GZU2	1588 aa		33.43	■■■□□ 2.94
CTSH-210	ENST00000529861	BAZ1B	Q9UIG0	1483 aa	Known RBP	33.35	■■■□□ 2.93
CTSH-210	ENST00000529861	NES	P48681	1621 aa		33.27	■■■□□ 2.92
CTSH-210	ENST00000529861	ERCC6	Q03468	1493 aa		33.15	■■■□□ 2.9
CTSH-210	ENST00000529861	WIZ	O95785	1651 aa		33.12	■■■□□ 2.89
CTSH-210	ENST00000529861	CUX2	O14529	1486 aa		33.05	■■■□□ 2.88
CTSH-210	ENST00000529861	RSF1	Q96T23	1441 aa	Predicted RBP	33.03	■■■□□ 2.88
CTSH-210	ENST00000529861	LAMC3	Q9Y6N6	1575 aa		32.92	■■■□□ 2.86
CTSH-210	ENST00000529861	DNAJC5	Q9H3Z4	198 aa		32.85	■■■□□ 2.85
CTSH-210	ENST00000529861	THOC2	Q8NI27	1593 aa	Known RBP	32.82	■■■□□ 2.84
CTSH-210	ENST00000529861	CADPS	Q9ULU8	1353 aa		32.77	■■■□□ 2.84
CTSH-210	ENST00000529861	KIF21A	Q7Z4S6	1674 aa		32.77	■■■□□ 2.84
CTSH-210	ENST00000529861	TOP2A	P11388	1531 aa	Known RBP	32.71	■■■□□ 2.83
CTSH-210	ENST00000529861	PDS5B	Q9NTI5	1447 aa		32.69	■■■□□ 2.82
CTSH-210	ENST00000529861	CFTR	P13569	1480 aa		32.46	■■■□□ 2.79
CTSH-210	ENST00000529861	MRC2	Q9UBG0	1479 aa		32.45	■■■□□ 2.79
CTSH-210	ENST00000529861	WDR62	O43379	1518 aa		32.4	■■■□□ 2.78
CTSH-210	ENST00000529861	FANCD2	Q9BXW9	1451 aa		32.38	■■■□□ 2.77
CTSH-210	ENST00000529861	CCDC88B	A6NC98	1476 aa		32.36	■■■□□ 2.77
CTSH-210	ENST00000529861	CEP164	Q9UPV0	1460 aa		32.35	■■■□□ 2.77
CTSH-210	ENST00000529861	URB2	Q14146	1524 aa	Known RBP	32.18	■■■□□ 2.74
CTSH-210	ENST00000529861	SUPT5H	O00267	1087 aa	Known RBP	32.13	■■■□□ 2.73
CTSH-210	ENST00000529861	PRDM2	Q13029	1718 aa		32.12	■■■□□ 2.73
CTSH-210	ENST00000529861	TOPBP1	Q92547	1522 aa		31.83	■■■□□ 2.69
CTSH-210	ENST00000529861	ZNF608	Q9ULD9	1512 aa	Predicted RBP	31.75	■■■□□ 2.67
CTSH-210	ENST00000529861	IFT140	Q96RY7	1462 aa		31.71	■■■□□ 2.67
CTSH-210	ENST00000529861	ABCC8	Q09428	1581 aa		31.68	■■■□□ 2.66
CTSH-210	ENST00000529861	DNMBP	Q6XZF7	1577 aa		31.68	■■■□□ 2.66
CTSH-210	ENST00000529861	OSCAR	Q8IYS5	282 aa		31.59	■■■□□ 2.65
CTSH-210	ENST00000529861	TARBP1	Q13395	1621 aa	Known RBP	31.55	■■■□□ 2.64
CTSH-210	ENST00000529861	POLA1	P09884	1462 aa	Predicted RBP	31.52	■■■□□ 2.64
CTSH-210	ENST00000529861	EIF4G3	O43432	1585 aa	Known RBP	31.5	■■■□□ 2.63
CTSH-210	ENST00000529861	AQR	O60306	1485 aa	Known RBP eCLIP	31.47	■■■□□ 2.63	1e-6	■■■■□ 23.8
CTSH-210	ENST00000529861	TRIM41	Q8WV44	630 aa		31.46	■■■□□ 2.63
CTSH-210	ENST00000529861	RAD54L2	Q9Y4B4	1467 aa		31.46	■■■□□ 2.63
CTSH-210	ENST00000529861	CUX1	P39880	1505 aa		31.4	■■■□□ 2.62
CTSH-210	ENST00000529861	FGD5	Q6ZNL6	1462 aa		31.35	■■■□□ 2.61
CTSH-210	ENST00000529861	SOGA1	O94964	1423 aa		31.35	■■■□□ 2.61
CTSH-210	ENST00000529861	TDRD9	Q8NDG6	1382 aa	Known RBP	31.3	■■■□□ 2.6
CTSH-210	ENST00000529861	CHD1	O14646	1710 aa		31.23	■■■□□ 2.59
CTSH-210	ENST00000529861	RIMBP3C	A6NJZ7	1639 aa		31.22	■■■□□ 2.59
CTSH-210	ENST00000529861	RIMBP3B	A6NNM3	1639 aa		31.22	■■■□□ 2.59
CTSH-210	ENST00000529861	RIMBP3	Q9UFD9	1639 aa		31.22	■■■□□ 2.59
CTSH-210	ENST00000529861	ARHGEF11	O15085	1522 aa		31.14	■■■□□ 2.57
CTSH-210	ENST00000529861	WRN	Q14191	1432 aa	Predicted RBP eCLIP	31.13	■■■□□ 2.57
CTSH-210	ENST00000529861	WDR97	A6NE52	1622 aa		31.12	■■■□□ 2.57
CTSH-210	ENST00000529861	SNAPC4	Q5SXM2	1469 aa		31.11	■■■□□ 2.57
CTSH-210	ENST00000529861	FBLN2	P98095	1184 aa		31.1	■■■□□ 2.57
CTSH-210	ENST00000529861	BIVM-ERCC5	R4GMW8	1640 aa		31.09	■■■□□ 2.57
CTSH-210	ENST00000529861	TOP2B	Q02880	1626 aa		31.08	■■■□□ 2.57
CTSH-210	ENST00000529861	SYNJ1	O43426	1573 aa		31.06	■■■□□ 2.56
CTSH-210	ENST00000529861	GRIN2B	Q13224	1484 aa		31.01	■■■□□ 2.56
CTSH-210	ENST00000529861	ABCA10	Q8WWZ4	1543 aa		31	■■■□□ 2.55
CTSH-210	ENST00000529861	MAGI1	Q96QZ7	1491 aa	Predicted RBP	30.98	■■■□□ 2.55
CTSH-210	ENST00000529861	GAPVD1	Q14C86	1478 aa		30.96	■■■□□ 2.55
CTSH-210	ENST00000529861	ABCA5	Q8WWZ7	1642 aa		30.94	■■■□□ 2.54
CTSH-210	ENST00000529861	PBRM1	Q86U86	1689 aa		30.92	■■■□□ 2.54
CTSH-210	ENST00000529861	CHMP7	Q8WUX9	453 aa	Predicted RBP	30.91	■■■□□ 2.54
CTSH-210	ENST00000529861	CLASP1	Q7Z460	1538 aa		30.91	■■■□□ 2.54
CTSH-210	ENST00000529861	SYNJ2	O15056	1496 aa		30.89	■■■□□ 2.54
CTSH-210	ENST00000529861	ARAP1	Q96P48	1450 aa		30.89	■■■□□ 2.53
CTSH-210	ENST00000529861	CYB5RL	Q6IPT4	315 aa		30.88	■■■□□ 2.53
CTSH-210	ENST00000529861	ADAMTS12	P58397	1594 aa		30.66	■■■□□ 2.5
CTSH-210	ENST00000529861	GRIN2A	Q12879	1464 aa		30.65	■■■□□ 2.5
CTSH-210	ENST00000529861	ERICH3	Q5RHP9	1530 aa		30.62	■■■□□ 2.49
CTSH-210	ENST00000529861	CEP170	Q5SW79	1584 aa		30.58	■■■□□ 2.49
CTSH-210	ENST00000529861	NUP160	Q12769	1436 aa		30.57	■■■□□ 2.48
CTSH-210	ENST00000529861	FHAD1	B1AJZ9	1412 aa		30.56	■■■□□ 2.48
CTSH-210	ENST00000529861	ERCC6L2	Q5T890	1561 aa		30.54	■■■□□ 2.48
CTSH-210	ENST00000529861	KIF27	Q86VH2	1401 aa		30.5	■■■□□ 2.47
CTSH-210	ENST00000529861	IGF1R	P08069	1367 aa		30.43	■■■□□ 2.46
CTSH-210	ENST00000529861	SHROOM2	Q13796	1616 aa		30.4	■■■□□ 2.46
CTSH-210	ENST00000529861	TRH	P20396	242 aa	Predicted RBP	30.38	■■■□□ 2.45
CTSH-210	ENST00000529861	CUL7	Q14999	1698 aa		30.3	■■■□□ 2.44
CTSH-210	ENST00000529861	CARMIL1	Q5VZK9	1371 aa		30.25	■■■□□ 2.43

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