RNA–Protein interactions for RNA: ENST00000354209.7

PRKAA1-202, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PRKAA1, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-202ENST00000354209 NISCHQ9Y2I1 1504 aa49.26■■■■■ 5.48
PRKAA1-202ENST00000354209 CCDC180Q9P1Z9 1646 aa43.01■■■■■ 4.48
PRKAA1-202ENST00000354209 ZCCHC6Q5VYS8 1495 aaKnown RBP41.41■■■■■ 4.22
PRKAA1-202ENST00000354209 DCAF1Q9Y4B6 1507 aa40.78■■■■■ 4.12
PRKAA1-202ENST00000354209 ABCC9O60706 1549 aa40.63■■■■■ 4.1
PRKAA1-202ENST00000354209 DCAF8L2P0C7V8 631 aa40.51■■■■■ 4.08
PRKAA1-202ENST00000354209 MYO15BQ96JP2 1530 aa40.32■■■■■ 4.05
PRKAA1-202ENST00000354209 NACADO15069 1562 aa40.05■■■■■ 4
PRKAA1-202ENST00000354209 SHROOM4Q9ULL8 1493 aa40.04■■■■■ 4
PRKAA1-202ENST00000354209 RB1CC1Q8TDY2 1594 aa39.7■■■■□ 3.95
PRKAA1-202ENST00000354209 SCRIBQ14160 1630 aa39.49■■■■□ 3.91
PRKAA1-202ENST00000354209 UNC13AQ9UPW8 1703 aa38.91■■■■□ 3.82
PRKAA1-202ENST00000354209 BICRAQ9NZM4 1560 aa38.54■■■■□ 3.76
PRKAA1-202ENST00000354209 SUPT5HO00267 1087 aaKnown RBP38.46■■■■□ 3.75
PRKAA1-202ENST00000354209 CECR2Q9BXF3 1484 aa38.26■■■■□ 3.72
PRKAA1-202ENST00000354209 PABPN1Q86U42 306 aaKnown RBP eCLIP38.26■■■■□ 3.71
PRKAA1-202ENST00000354209 RSF1Q96T23 1441 aaPredicted RBP38.18■■■■□ 3.7
PRKAA1-202ENST00000354209 MROH2BQ7Z745 1585 aa38.05■■■■□ 3.68
PRKAA1-202ENST00000354209 BAZ1AQ9NRL2 1556 aaPredicted RBP38.05■■■■□ 3.68
PRKAA1-202ENST00000354209 SMARCA4P51532 1647 aa37.88■■■■□ 3.66
PRKAA1-202ENST00000354209 WIZO95785 1651 aa37.72■■■■□ 3.63
PRKAA1-202ENST00000354209 PEG3Q9GZU2 1588 aa37.47■■■■□ 3.59
PRKAA1-202ENST00000354209 TOP2AP11388 1531 aaKnown RBP37.36■■■■□ 3.57
PRKAA1-202ENST00000354209 EIF4G1Q04637 1599 aaKnown RBP37.36■■■■□ 3.57
PRKAA1-202ENST00000354209 ATAD2BQ9ULI0 1458 aa37.27■■■■□ 3.56
PRKAA1-202ENST00000354209 SMARCA2P51531 1590 aa37.24■■■■□ 3.55
PRKAA1-202ENST00000354209 BAZ1BQ9UIG0 1483 aaKnown RBP37.03■■■■□ 3.52
PRKAA1-202ENST00000354209 NCAPD3P42695 1498 aa36.96■■■■□ 3.51
PRKAA1-202ENST00000354209 CCDC88BA6NC98 1476 aa36.95■■■■□ 3.5
PRKAA1-202ENST00000354209 HMGXB3Q12766 1538 aa36.94■■■■□ 3.5
PRKAA1-202ENST00000354209 CHIC1Q5VXU3 224 aa36.86■■■■□ 3.49
PRKAA1-202ENST00000354209 CC2D2AQ9P2K1 1620 aa36.8■■■■□ 3.48
PRKAA1-202ENST00000354209 TRIM41Q8WV44 630 aa36.19■■■■□ 3.38
PRKAA1-202ENST00000354209 ABCC8Q09428 1581 aa36.15■■■■□ 3.38
PRKAA1-202ENST00000354209 CFTRP13569 1480 aa36.13■■■■□ 3.37
PRKAA1-202ENST00000354209 CADPSQ9ULU8 1353 aa35.98■■■■□ 3.35
PRKAA1-202ENST00000354209 PRDM2Q13029 1718 aa35.96■■■■□ 3.35
PRKAA1-202ENST00000354209 WRNQ14191 1432 aaPredicted RBP eCLIP35.93■■■■□ 3.34
PRKAA1-202ENST00000354209 DNAJC5BQ9UF47 199 aa35.85■■■■□ 3.33
PRKAA1-202ENST00000354209 SYNJ1O43426 1573 aa35.81■■■■□ 3.32
PRKAA1-202ENST00000354209 LAMC3Q9Y6N6 1575 aa35.72■■■■□ 3.31
PRKAA1-202ENST00000354209 NESP48681 1621 aa35.68■■■■□ 3.3
PRKAA1-202ENST00000354209 TOP2BQ02880 1626 aa35.68■■■■□ 3.3
PRKAA1-202ENST00000354209 BIVM-ERCC5R4GMW8 1640 aa35.66■■■■□ 3.3
PRKAA1-202ENST00000354209 FANCD2Q9BXW9 1451 aa35.59■■■■□ 3.29
PRKAA1-202ENST00000354209 CUX1P39880 1505 aa35.58■■■■□ 3.29
PRKAA1-202ENST00000354209 FAM9AQ8IZU1 332 aaPredicted RBP35.49■■■■□ 3.27
PRKAA1-202ENST00000354209 SOGA1O94964 1423 aa35.45■■■■□ 3.27
PRKAA1-202ENST00000354209 EEA1Q15075 1411 aa35.4■■■■□ 3.26
PRKAA1-202ENST00000354209 PDS5BQ9NTI5 1447 aa35.4■■■■□ 3.26
PRKAA1-202ENST00000354209 LOC105371045A0A1W2PR82 267 aa35.39■■■■□ 3.26
PRKAA1-202ENST00000354209 CEP164Q9UPV0 1460 aa35.38■■■■□ 3.25
PRKAA1-202ENST00000354209 RUSC2Q8N2Y8 1516 aa35.32■■■■□ 3.25
PRKAA1-202ENST00000354209 DNMBPQ6XZF7 1577 aa35.29■■■■□ 3.24
PRKAA1-202ENST00000354209 KIF21AQ7Z4S6 1674 aa35.27■■■■□ 3.24
PRKAA1-202ENST00000354209 TOPBP1Q92547 1522 aa35.21■■■■□ 3.23
PRKAA1-202ENST00000354209 FGD5Q6ZNL6 1462 aa35.19■■■■□ 3.22
PRKAA1-202ENST00000354209 URB2Q14146 1524 aaKnown RBP35.16■■■■□ 3.22
PRKAA1-202ENST00000354209 CSRNP3Q8WYN3 585 aa35.14■■■■□ 3.22
PRKAA1-202ENST00000354209 POLA1P09884 1462 aaPredicted RBP35.04■■■■□ 3.2
PRKAA1-202ENST00000354209 KIF27Q86VH2 1401 aa35.01■■■■□ 3.2
PRKAA1-202ENST00000354209 MRC2Q9UBG0 1479 aa34.98■■■■□ 3.19
PRKAA1-202ENST00000354209 KIF21BO75037 1637 aa34.97■■■■□ 3.19
PRKAA1-202ENST00000354209 EHMT2Q96KQ7 1210 aa34.95■■■■□ 3.19
PRKAA1-202ENST00000354209 CUX2O14529 1486 aa34.93■■■■□ 3.18
PRKAA1-202ENST00000354209 ABCA10Q8WWZ4 1543 aa34.9■■■■□ 3.18
PRKAA1-202ENST00000354209 GOLGA3Q08378 1498 aa34.9■■■■□ 3.18
PRKAA1-202ENST00000354209 RAD54L2Q9Y4B4 1467 aa34.89■■■■□ 3.18
PRKAA1-202ENST00000354209 WDR97A6NE52 1622 aa34.83■■■■□ 3.17
PRKAA1-202ENST00000354209 ERCC6Q03468 1493 aa34.83■■■■□ 3.17
PRKAA1-202ENST00000354209 WDR62O43379 1518 aa34.82■■■■□ 3.16
PRKAA1-202ENST00000354209 PRXQ9BXM0 1461 aa34.81■■■■□ 3.16
PRKAA1-202ENST00000354209 TNIKQ9UKE5 1360 aa34.77■■■■□ 3.16
PRKAA1-202ENST00000354209 ERICH3Q5RHP9 1530 aa34.75■■■■□ 3.15
PRKAA1-202ENST00000354209 RAPGEF2Q9Y4G8 1499 aa34.75■■■■□ 3.15
PRKAA1-202ENST00000354209 THOC2Q8NI27 1593 aaKnown RBP34.74■■■■□ 3.15
PRKAA1-202ENST00000354209 TARBP1Q13395 1621 aaKnown RBP34.71■■■■□ 3.15
PRKAA1-202ENST00000354209 IGF1RP08069 1367 aa34.71■■■■□ 3.15
PRKAA1-202ENST00000354209 ABCA5Q8WWZ7 1642 aa34.65■■■■□ 3.14
PRKAA1-202ENST00000354209 UBTFP17480 764 aaKnown RBP34.64■■■■□ 3.14
PRKAA1-202ENST00000354209 CEP162Q5TB80 1403 aa34.59■■■■□ 3.13
PRKAA1-202ENST00000354209 IFT140Q96RY7 1462 aa34.54■■■■□ 3.12
PRKAA1-202ENST00000354209 TDRD9Q8NDG6 1382 aaKnown RBP34.53■■■■□ 3.12
PRKAA1-202ENST00000354209 CARMIL1Q5VZK9 1371 aa34.52■■■■□ 3.12
PRKAA1-202ENST00000354209 GAPVD1Q14C86 1478 aa34.52■■■■□ 3.12
PRKAA1-202ENST00000354209 CUL7Q14999 1698 aa34.49■■■■□ 3.11
PRKAA1-202ENST00000354209 PBRM1Q86U86 1689 aa34.36■■■■□ 3.09
PRKAA1-202ENST00000354209 ZNF608Q9ULD9 1512 aaPredicted RBP34.34■■■■□ 3.09
PRKAA1-202ENST00000354209 AQRO60306 1485 aaKnown RBP eCLIP34.33■■■■□ 3.09
PRKAA1-202ENST00000354209 CLIP1P30622 1438 aa34.32■■■■□ 3.08
PRKAA1-202ENST00000354209 GRIN2BQ13224 1484 aa34.27■■■■□ 3.08
PRKAA1-202ENST00000354209 EIF4G3O43432 1585 aaKnown RBP34.26■■■■□ 3.07
PRKAA1-202ENST00000354209 ADAMTS12P58397 1594 aa34.19■■■■□ 3.06
PRKAA1-202ENST00000354209 FHAD1B1AJZ9 1412 aa34.16■■■■□ 3.06
PRKAA1-202ENST00000354209 CTTNBP2Q8WZ74 1663 aa34.09■■■■□ 3.05
PRKAA1-202ENST00000354209 RANGAP1P46060 587 aaPredicted RBP34.05■■■■□ 3.04
PRKAA1-202ENST00000354209 SNAPC4Q5SXM2 1469 aa34.05■■■■□ 3.04
PRKAA1-202ENST00000354209 VPS8Q8N3P4 1428 aa34.03■■■■□ 3.04
PRKAA1-202ENST00000354209 ARAP1Q96P48 1450 aa34.03■■■■□ 3.04
PRKAA1-202ENST00000354209 ARHGAP35Q9NRY4 1499 aa34.03■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms