RNA–Protein interactions for RNA: ENST00000396654.6

AP1S3-203, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene AP1S3, Length 830 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-203ENST00000396654 NISCHQ9Y2I1 1504 aa41.42■■■■■ 4.22
AP1S3-203ENST00000396654 CCDC180Q9P1Z9 1646 aa36.86■■■■□ 3.49
AP1S3-203ENST00000396654 ABCC9O60706 1549 aa36.19■■■■□ 3.38
AP1S3-203ENST00000396654 DCAF8L2P0C7V8 631 aa34.76■■■■□ 3.16
AP1S3-203ENST00000396654 RB1CC1Q8TDY2 1594 aa34.71■■■■□ 3.15
AP1S3-203ENST00000396654 NACADO15069 1562 aa34.62■■■■□ 3.13
AP1S3-203ENST00000396654 ZCCHC6Q5VYS8 1495 aaKnown RBP34.49■■■■□ 3.11
AP1S3-203ENST00000396654 MYO15BQ96JP2 1530 aa34.29■■■■□ 3.08
AP1S3-203ENST00000396654 DCAF1Q9Y4B6 1507 aa34.17■■■■□ 3.06
AP1S3-203ENST00000396654 UNC13AQ9UPW8 1703 aa34.08■■■■□ 3.05
AP1S3-203ENST00000396654 PABPN1Q86U42 306 aaKnown RBP eCLIP33.81■■■■□ 3
AP1S3-203ENST00000396654 SCRIBQ14160 1630 aa33.75■■■□□ 2.99
AP1S3-203ENST00000396654 BICRAQ9NZM4 1560 aa33.68■■■□□ 2.98
AP1S3-203ENST00000396654 DNAJC5BQ9UF47 199 aa33.21■■■□□ 2.91
AP1S3-203ENST00000396654 SHROOM4Q9ULL8 1493 aa33.15■■■□□ 2.9
AP1S3-203ENST00000396654 EIF4G1Q04637 1599 aaKnown RBP32.79■■■□□ 2.84
AP1S3-203ENST00000396654 CC2D2AQ9P2K1 1620 aa32.71■■■□□ 2.83
AP1S3-203ENST00000396654 CECR2Q9BXF3 1484 aa32.46■■■□□ 2.79
AP1S3-203ENST00000396654 SMARCA4P51532 1647 aa32.2■■■□□ 2.75
AP1S3-203ENST00000396654 BAZ1AQ9NRL2 1556 aaPredicted RBP32.11■■■□□ 2.73
AP1S3-203ENST00000396654 MROH2BQ7Z745 1585 aa31.98■■■□□ 2.71
AP1S3-203ENST00000396654 ATAD2BQ9ULI0 1458 aa31.97■■■□□ 2.71
AP1S3-203ENST00000396654 SMARCA2P51531 1590 aa31.93■■■□□ 2.7
AP1S3-203ENST00000396654 NCAPD3P42695 1498 aa31.91■■■□□ 2.7
AP1S3-203ENST00000396654 PEG3Q9GZU2 1588 aa31.78■■■□□ 2.68
AP1S3-203ENST00000396654 HMGXB3Q12766 1538 aa31.78■■■□□ 2.68
AP1S3-203ENST00000396654 BAZ1BQ9UIG0 1483 aaKnown RBP31.75■■■□□ 2.67
AP1S3-203ENST00000396654 WIZO95785 1651 aa31.7■■■□□ 2.67
AP1S3-203ENST00000396654 RSF1Q96T23 1441 aaPredicted RBP31.54■■■□□ 2.64
AP1S3-203ENST00000396654 NESP48681 1621 aa31.31■■■□□ 2.6
AP1S3-203ENST00000396654 TOP2AP11388 1531 aaKnown RBP31.27■■■□□ 2.6
AP1S3-203ENST00000396654 ERCC6Q03468 1493 aa31.17■■■□□ 2.58
AP1S3-203ENST00000396654 LAMC3Q9Y6N6 1575 aa31.13■■■□□ 2.57
AP1S3-203ENST00000396654 CADPSQ9ULU8 1353 aa31■■■□□ 2.55
AP1S3-203ENST00000396654 KIF21AQ7Z4S6 1674 aa30.99■■■□□ 2.55
AP1S3-203ENST00000396654 CCDC88BA6NC98 1476 aa30.9■■■□□ 2.54
AP1S3-203ENST00000396654 PDS5BQ9NTI5 1447 aa30.89■■■□□ 2.53
AP1S3-203ENST00000396654 SUPT5HO00267 1087 aaKnown RBP30.85■■■□□ 2.53
AP1S3-203ENST00000396654 THOC2Q8NI27 1593 aaKnown RBP30.81■■■□□ 2.52
AP1S3-203ENST00000396654 CFTRP13569 1480 aa30.8■■■□□ 2.52
AP1S3-203ENST00000396654 CUX2O14529 1486 aa30.75■■■□□ 2.51
AP1S3-203ENST00000396654 PRDM2Q13029 1718 aa30.73■■■□□ 2.51
AP1S3-203ENST00000396654 FANCD2Q9BXW9 1451 aa30.71■■■□□ 2.51
AP1S3-203ENST00000396654 CEP164Q9UPV0 1460 aa30.68■■■□□ 2.5
AP1S3-203ENST00000396654 MRC2Q9UBG0 1479 aa30.63■■■□□ 2.49
AP1S3-203ENST00000396654 WDR62O43379 1518 aa30.52■■■□□ 2.48
AP1S3-203ENST00000396654 URB2Q14146 1524 aaKnown RBP30.42■■■□□ 2.46
AP1S3-203ENST00000396654 TOPBP1Q92547 1522 aa30.22■■■□□ 2.43
AP1S3-203ENST00000396654 DNMBPQ6XZF7 1577 aa30.18■■■□□ 2.42
AP1S3-203ENST00000396654 ABCC8Q09428 1581 aa30.12■■■□□ 2.41
AP1S3-203ENST00000396654 CUX1P39880 1505 aa30.01■■■□□ 2.39
AP1S3-203ENST00000396654 IFT140Q96RY7 1462 aa29.99■■■□□ 2.39
AP1S3-203ENST00000396654 POLA1P09884 1462 aaPredicted RBP29.95■■■□□ 2.39
AP1S3-203ENST00000396654 ZNF608Q9ULD9 1512 aaPredicted RBP29.94■■■□□ 2.38
AP1S3-203ENST00000396654 FGD5Q6ZNL6 1462 aa29.91■■■□□ 2.38
AP1S3-203ENST00000396654 TARBP1Q13395 1621 aaKnown RBP29.89■■■□□ 2.38
AP1S3-203ENST00000396654 RAD54L2Q9Y4B4 1467 aa29.88■■■□□ 2.37
AP1S3-203ENST00000396654 DNAJC5Q9H3Z4 198 aa29.85■■■□□ 2.37
AP1S3-203ENST00000396654 EIF4G3O43432 1585 aaKnown RBP29.84■■■□□ 2.37
AP1S3-203ENST00000396654 SOGA1O94964 1423 aa29.82■■■□□ 2.36
AP1S3-203ENST00000396654 WRNQ14191 1432 aaPredicted RBP eCLIP29.76■■■□□ 2.35
AP1S3-203ENST00000396654 SYNJ1O43426 1573 aa29.76■■■□□ 2.35
AP1S3-203ENST00000396654 AQRO60306 1485 aaKnown RBP eCLIP29.75■■■□□ 2.35
AP1S3-203ENST00000396654 BIVM-ERCC5R4GMW8 1640 aa29.73■■■□□ 2.35
AP1S3-203ENST00000396654 TOP2BQ02880 1626 aa29.71■■■□□ 2.35
AP1S3-203ENST00000396654 TDRD9Q8NDG6 1382 aaKnown RBP29.69■■■□□ 2.34
AP1S3-203ENST00000396654 WDR97A6NE52 1622 aa29.69■■■□□ 2.34
AP1S3-203ENST00000396654 ABCA10Q8WWZ4 1543 aa29.55■■■□□ 2.32
AP1S3-203ENST00000396654 CHD1O14646 1710 aa29.54■■■□□ 2.32
AP1S3-203ENST00000396654 PBRM1Q86U86 1689 aa29.54■■■□□ 2.32
AP1S3-203ENST00000396654 ABCA5Q8WWZ7 1642 aa29.49■■■□□ 2.31
AP1S3-203ENST00000396654 SNAPC4Q5SXM2 1469 aa29.49■■■□□ 2.31
AP1S3-203ENST00000396654 GAPVD1Q14C86 1478 aa29.48■■■□□ 2.31
AP1S3-203ENST00000396654 OSCARQ8IYS5 282 aa29.48■■■□□ 2.31
AP1S3-203ENST00000396654 GRIN2BQ13224 1484 aa29.46■■■□□ 2.31
AP1S3-203ENST00000396654 FBLN2P98095 1184 aa29.45■■■□□ 2.31
AP1S3-203ENST00000396654 MAGI1Q96QZ7 1491 aaPredicted RBP29.37■■■□□ 2.29
AP1S3-203ENST00000396654 CHMP7Q8WUX9 453 aaPredicted RBP29.29■■■□□ 2.28
AP1S3-203ENST00000396654 SYNJ2O15056 1496 aa29.27■■■□□ 2.28
AP1S3-203ENST00000396654 ADAMTS12P58397 1594 aa29.23■■■□□ 2.27
AP1S3-203ENST00000396654 ERICH3Q5RHP9 1530 aa29.19■■■□□ 2.26
AP1S3-203ENST00000396654 RIMBP3CA6NJZ7 1639 aa29.13■■■□□ 2.25
AP1S3-203ENST00000396654 RIMBP3BA6NNM3 1639 aa29.13■■■□□ 2.25
AP1S3-203ENST00000396654 RIMBP3Q9UFD9 1639 aa29.13■■■□□ 2.25
AP1S3-203ENST00000396654 KIF27Q86VH2 1401 aa29.11■■■□□ 2.25
AP1S3-203ENST00000396654 FHAD1B1AJZ9 1412 aa29.11■■■□□ 2.25
AP1S3-203ENST00000396654 GRIN2AQ12879 1464 aa29.1■■■□□ 2.25
AP1S3-203ENST00000396654 CLASP1Q7Z460 1538 aa29.1■■■□□ 2.25
AP1S3-203ENST00000396654 ARHGEF11O15085 1522 aa29.07■■■□□ 2.24
AP1S3-203ENST00000396654 TRIM41Q8WV44 630 aa29.06■■■□□ 2.24
AP1S3-203ENST00000396654 CEP170Q5SW79 1584 aa29.01■■■□□ 2.24
AP1S3-203ENST00000396654 IGF1RP08069 1367 aa28.99■■■□□ 2.23
AP1S3-203ENST00000396654 CUL7Q14999 1698 aa28.98■■■□□ 2.23
AP1S3-203ENST00000396654 RUSC2Q8N2Y8 1516 aa28.96■■■□□ 2.23
AP1S3-203ENST00000396654 NUP160Q12769 1436 aa28.93■■■□□ 2.22
AP1S3-203ENST00000396654 CARMIL1Q5VZK9 1371 aa28.85■■■□□ 2.21
AP1S3-203ENST00000396654 ARAP1Q96P48 1450 aa28.85■■■□□ 2.21
AP1S3-203ENST00000396654 CYB5RLQ6IPT4 315 aa28.82■■■□□ 2.2
AP1S3-203ENST00000396654 ERCC6L2Q5T890 1561 aa28.79■■■□□ 2.2
AP1S3-203ENST00000396654 SHROOM2Q13796 1616 aa28.76■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms