RNA–Protein interactions for RNA: ENST00000532465.1

LMNB2-205, Transcript of lamin B2, humanhuman

TSL 3

Gene LMNB2, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-205ENST00000532465 NISCHQ9Y2I1 1504 aa46.1■■■■■ 4.97
LMNB2-205ENST00000532465 CCDC180Q9P1Z9 1646 aa41.11■■■■■ 4.17
LMNB2-205ENST00000532465 ABCC9O60706 1549 aa40.67■■■■■ 4.1
LMNB2-205ENST00000532465 RB1CC1Q8TDY2 1594 aa38.9■■■■□ 3.82
LMNB2-205ENST00000532465 NACADO15069 1562 aa38.75■■■■□ 3.79
LMNB2-205ENST00000532465 DCAF8L2P0C7V8 631 aa38.71■■■■□ 3.79
LMNB2-205ENST00000532465 MYO15BQ96JP2 1530 aa38.38■■■■□ 3.73
LMNB2-205ENST00000532465 ZCCHC6Q5VYS8 1495 aaKnown RBP38.33■■■■□ 3.73
LMNB2-205ENST00000532465 DCAF1Q9Y4B6 1507 aa38.08■■■■□ 3.69
LMNB2-205ENST00000532465 UNC13AQ9UPW8 1703 aa38.04■■■■□ 3.68
LMNB2-205ENST00000532465 PABPN1Q86U42 306 aaKnown RBP eCLIP37.96■■■■□ 3.67
LMNB2-205ENST00000532465 BICRAQ9NZM4 1560 aa37.78■■■■□ 3.64
LMNB2-205ENST00000532465 DNAJC5BQ9UF47 199 aa37.71■■■■□ 3.63
LMNB2-205ENST00000532465 SCRIBQ14160 1630 aa37.55■■■■□ 3.6
LMNB2-205ENST00000532465 SHROOM4Q9ULL8 1493 aa37.26■■■■□ 3.56
LMNB2-205ENST00000532465 EIF4G1Q04637 1599 aaKnown RBP36.8■■■■□ 3.48
LMNB2-205ENST00000532465 CC2D2AQ9P2K1 1620 aa36.75■■■■□ 3.47
LMNB2-205ENST00000532465 CECR2Q9BXF3 1484 aa36.56■■■■□ 3.44
LMNB2-205ENST00000532465 SMARCA4P51532 1647 aa35.86■■■■□ 3.33
LMNB2-205ENST00000532465 NCAPD3P42695 1498 aa35.78■■■■□ 3.32
LMNB2-205ENST00000532465 ATAD2BQ9ULI0 1458 aa35.76■■■■□ 3.32
LMNB2-205ENST00000532465 BAZ1AQ9NRL2 1556 aaPredicted RBP35.74■■■■□ 3.31
LMNB2-205ENST00000532465 SMARCA2P51531 1590 aa35.67■■■■□ 3.3
LMNB2-205ENST00000532465 HMGXB3Q12766 1538 aa35.56■■■■□ 3.28
LMNB2-205ENST00000532465 MROH2BQ7Z745 1585 aa35.55■■■■□ 3.28
LMNB2-205ENST00000532465 PEG3Q9GZU2 1588 aa35.48■■■■□ 3.27
LMNB2-205ENST00000532465 BAZ1BQ9UIG0 1483 aaKnown RBP35.44■■■■□ 3.26
LMNB2-205ENST00000532465 WIZO95785 1651 aa35.15■■■■□ 3.22
LMNB2-205ENST00000532465 NESP48681 1621 aa35.1■■■■□ 3.21
LMNB2-205ENST00000532465 ERCC6Q03468 1493 aa35.06■■■■□ 3.2
LMNB2-205ENST00000532465 RSF1Q96T23 1441 aaPredicted RBP34.99■■■■□ 3.19
LMNB2-205ENST00000532465 LAMC3Q9Y6N6 1575 aa34.88■■■■□ 3.17
LMNB2-205ENST00000532465 CUX2O14529 1486 aa34.8■■■■□ 3.16
LMNB2-205ENST00000532465 TOP2AP11388 1531 aaKnown RBP34.73■■■■□ 3.15
LMNB2-205ENST00000532465 CADPSQ9ULU8 1353 aa34.72■■■■□ 3.15
LMNB2-205ENST00000532465 PDS5BQ9NTI5 1447 aa34.66■■■■□ 3.14
LMNB2-205ENST00000532465 KIF21AQ7Z4S6 1674 aa34.64■■■■□ 3.14
LMNB2-205ENST00000532465 THOC2Q8NI27 1593 aaKnown RBP34.62■■■■□ 3.13
LMNB2-205ENST00000532465 CFTRP13569 1480 aa34.44■■■■□ 3.1
LMNB2-205ENST00000532465 MRC2Q9UBG0 1479 aa34.36■■■■□ 3.09
LMNB2-205ENST00000532465 FANCD2Q9BXW9 1451 aa34.34■■■■□ 3.09
LMNB2-205ENST00000532465 CCDC88BA6NC98 1476 aa34.33■■■■□ 3.09
LMNB2-205ENST00000532465 CEP164Q9UPV0 1460 aa34.33■■■■□ 3.09
LMNB2-205ENST00000532465 WDR62O43379 1518 aa34.25■■■■□ 3.07
LMNB2-205ENST00000532465 DNAJC5Q9H3Z4 198 aa34.2■■■■□ 3.07
LMNB2-205ENST00000532465 PRDM2Q13029 1718 aa34.12■■■■□ 3.05
LMNB2-205ENST00000532465 URB2Q14146 1524 aaKnown RBP34.04■■■■□ 3.04
LMNB2-205ENST00000532465 SUPT5HO00267 1087 aaKnown RBP33.85■■■■□ 3.01
LMNB2-205ENST00000532465 TOPBP1Q92547 1522 aa33.75■■■□□ 2.99
LMNB2-205ENST00000532465 ABCC8Q09428 1581 aa33.66■■■□□ 2.98
LMNB2-205ENST00000532465 DNMBPQ6XZF7 1577 aa33.66■■■□□ 2.98
LMNB2-205ENST00000532465 IFT140Q96RY7 1462 aa33.62■■■□□ 2.97
LMNB2-205ENST00000532465 ZNF608Q9ULD9 1512 aaPredicted RBP33.54■■■□□ 2.96
LMNB2-205ENST00000532465 POLA1P09884 1462 aaPredicted RBP33.44■■■□□ 2.94
LMNB2-205ENST00000532465 TARBP1Q13395 1621 aaKnown RBP33.41■■■□□ 2.94
LMNB2-205ENST00000532465 EIF4G3O43432 1585 aaKnown RBP33.37■■■□□ 2.93
LMNB2-205ENST00000532465 CUX1P39880 1505 aa33.37■■■□□ 2.93
LMNB2-205ENST00000532465 RAD54L2Q9Y4B4 1467 aa33.33■■■□□ 2.93
LMNB2-205ENST00000532465 FGD5Q6ZNL6 1462 aa33.31■■■□□ 2.92
LMNB2-205ENST00000532465 OSCARQ8IYS5 282 aa33.3■■■□□ 2.92
LMNB2-205ENST00000532465 AQRO60306 1485 aaKnown RBP eCLIP33.3■■■□□ 2.923e-8■■■■□ 23.7
LMNB2-205ENST00000532465 SOGA1O94964 1423 aa33.28■■■□□ 2.92
LMNB2-205ENST00000532465 TDRD9Q8NDG6 1382 aaKnown RBP33.18■■■□□ 2.9
LMNB2-205ENST00000532465 WDR97A6NE52 1622 aa33.06■■■□□ 2.88
LMNB2-205ENST00000532465 CHD1O14646 1710 aa33.02■■■□□ 2.88
LMNB2-205ENST00000532465 WRNQ14191 1432 aaPredicted RBP eCLIP33■■■□□ 2.87
LMNB2-205ENST00000532465 SNAPC4Q5SXM2 1469 aa32.98■■■□□ 2.87
LMNB2-205ENST00000532465 FBLN2P98095 1184 aa32.97■■■□□ 2.87
LMNB2-205ENST00000532465 SYNJ1O43426 1573 aa32.96■■■□□ 2.87
LMNB2-205ENST00000532465 TOP2BQ02880 1626 aa32.95■■■□□ 2.87
LMNB2-205ENST00000532465 BIVM-ERCC5R4GMW8 1640 aa32.95■■■□□ 2.87
LMNB2-205ENST00000532465 TRIM41Q8WV44 630 aa32.95■■■□□ 2.87
LMNB2-205ENST00000532465 ABCA10Q8WWZ4 1543 aa32.95■■■□□ 2.87
LMNB2-205ENST00000532465 GRIN2BQ13224 1484 aa32.93■■■□□ 2.86
LMNB2-205ENST00000532465 GAPVD1Q14C86 1478 aa32.89■■■□□ 2.86
LMNB2-205ENST00000532465 MAGI1Q96QZ7 1491 aaPredicted RBP32.88■■■□□ 2.85
LMNB2-205ENST00000532465 ABCA5Q8WWZ7 1642 aa32.86■■■□□ 2.85
LMNB2-205ENST00000532465 PBRM1Q86U86 1689 aa32.85■■■□□ 2.85
LMNB2-205ENST00000532465 RIMBP3CA6NJZ7 1639 aa32.84■■■□□ 2.85
LMNB2-205ENST00000532465 RIMBP3BA6NNM3 1639 aa32.84■■■□□ 2.85
LMNB2-205ENST00000532465 RIMBP3Q9UFD9 1639 aa32.84■■■□□ 2.85
LMNB2-205ENST00000532465 CHMP7Q8WUX9 453 aaPredicted RBP32.8■■■□□ 2.84
LMNB2-205ENST00000532465 ARHGEF11O15085 1522 aa32.79■■■□□ 2.84
LMNB2-205ENST00000532465 SYNJ2O15056 1496 aa32.77■■■□□ 2.84
LMNB2-205ENST00000532465 CLASP1Q7Z460 1538 aa32.66■■■□□ 2.82
LMNB2-205ENST00000532465 ADAMTS12P58397 1594 aa32.58■■■□□ 2.81
LMNB2-205ENST00000532465 ERICH3Q5RHP9 1530 aa32.53■■■□□ 2.8
LMNB2-205ENST00000532465 GRIN2AQ12879 1464 aa32.53■■■□□ 2.8
LMNB2-205ENST00000532465 ARAP1Q96P48 1450 aa32.51■■■□□ 2.79
LMNB2-205ENST00000532465 CYB5RLQ6IPT4 315 aa32.51■■■□□ 2.79
LMNB2-205ENST00000532465 FHAD1B1AJZ9 1412 aa32.5■■■□□ 2.79
LMNB2-205ENST00000532465 CEP170Q5SW79 1584 aa32.4■■■□□ 2.78
LMNB2-205ENST00000532465 NUP160Q12769 1436 aa32.39■■■□□ 2.78
LMNB2-205ENST00000532465 KIF27Q86VH2 1401 aa32.32■■■□□ 2.76
LMNB2-205ENST00000532465 IGF1RP08069 1367 aa32.25■■■□□ 2.75
LMNB2-205ENST00000532465 ERCC6L2Q5T890 1561 aa32.22■■■□□ 2.75
LMNB2-205ENST00000532465 SHROOM2Q13796 1616 aa32.18■■■□□ 2.74
LMNB2-205ENST00000532465 CUL7Q14999 1698 aa32.16■■■□□ 2.74
LMNB2-205ENST00000532465 RUSC2Q8N2Y8 1516 aa32.1■■■□□ 2.73
LMNB2-205ENST00000532465 JPH4Q96JJ6 628 aa32.06■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms