RNA–Protein interactions for RNA: ENST00000597003.1

ITPKC-202, Transcript of inositol-trisphosphate 3-kinase C, humanhuman

TSL 2

Gene ITPKC, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITPKC-202ENST00000597003 NISCHQ9Y2I1 1504 aa43.32■■■■■ 4.53
ITPKC-202ENST00000597003 CCDC180Q9P1Z9 1646 aa38.63■■■■□ 3.77
ITPKC-202ENST00000597003 ABCC9O60706 1549 aa38.33■■■■□ 3.73
ITPKC-202ENST00000597003 RB1CC1Q8TDY2 1594 aa36.6■■■■□ 3.45
ITPKC-202ENST00000597003 DCAF8L2P0C7V8 631 aa36.55■■■■□ 3.44
ITPKC-202ENST00000597003 NACADO15069 1562 aa36.44■■■■□ 3.42
ITPKC-202ENST00000597003 MYO15BQ96JP2 1530 aa36.02■■■■□ 3.36
ITPKC-202ENST00000597003 ZCCHC6Q5VYS8 1495 aaKnown RBP35.99■■■■□ 3.35
ITPKC-202ENST00000597003 PABPN1Q86U42 306 aaKnown RBP eCLIP35.8■■■■□ 3.32
ITPKC-202ENST00000597003 UNC13AQ9UPW8 1703 aa35.78■■■■□ 3.32
ITPKC-202ENST00000597003 DCAF1Q9Y4B6 1507 aa35.74■■■■□ 3.31
ITPKC-202ENST00000597003 DNAJC5BQ9UF47 199 aa35.58■■■■□ 3.29
ITPKC-202ENST00000597003 BICRAQ9NZM4 1560 aa35.52■■■■□ 3.28
ITPKC-202ENST00000597003 SCRIBQ14160 1630 aa35.33■■■■□ 3.25
ITPKC-202ENST00000597003 SHROOM4Q9ULL8 1493 aa35■■■■□ 3.19
ITPKC-202ENST00000597003 EIF4G1Q04637 1599 aaKnown RBP34.62■■■■□ 3.13
ITPKC-202ENST00000597003 CC2D2AQ9P2K1 1620 aa34.6■■■■□ 3.13
ITPKC-202ENST00000597003 CECR2Q9BXF3 1484 aa34.45■■■■□ 3.1
ITPKC-202ENST00000597003 SMARCA4P51532 1647 aa33.71■■■□□ 2.99
ITPKC-202ENST00000597003 NCAPD3P42695 1498 aa33.64■■■□□ 2.98
ITPKC-202ENST00000597003 ATAD2BQ9ULI0 1458 aa33.63■■■□□ 2.97
ITPKC-202ENST00000597003 BAZ1AQ9NRL2 1556 aaPredicted RBP33.59■■■□□ 2.97
ITPKC-202ENST00000597003 SMARCA2P51531 1590 aa33.54■■■□□ 2.96
ITPKC-202ENST00000597003 MROH2BQ7Z745 1585 aa33.43■■■□□ 2.94
ITPKC-202ENST00000597003 HMGXB3Q12766 1538 aa33.42■■■□□ 2.94
ITPKC-202ENST00000597003 BAZ1BQ9UIG0 1483 aaKnown RBP33.35■■■□□ 2.93
ITPKC-202ENST00000597003 PEG3Q9GZU2 1588 aa33.31■■■□□ 2.92
ITPKC-202ENST00000597003 WIZO95785 1651 aa33.05■■■□□ 2.88
ITPKC-202ENST00000597003 NESP48681 1621 aa33.05■■■□□ 2.88
ITPKC-202ENST00000597003 ERCC6Q03468 1493 aa33.05■■■□□ 2.88
ITPKC-202ENST00000597003 RSF1Q96T23 1441 aaPredicted RBP32.89■■■□□ 2.86
ITPKC-202ENST00000597003 LAMC3Q9Y6N6 1575 aa32.8■■■□□ 2.84
ITPKC-202ENST00000597003 CUX2O14529 1486 aa32.76■■■□□ 2.84
ITPKC-202ENST00000597003 CADPSQ9ULU8 1353 aa32.68■■■□□ 2.82
ITPKC-202ENST00000597003 PDS5BQ9NTI5 1447 aa32.64■■■□□ 2.82
ITPKC-202ENST00000597003 TOP2AP11388 1531 aaKnown RBP32.62■■■□□ 2.81
ITPKC-202ENST00000597003 KIF21AQ7Z4S6 1674 aa32.6■■■□□ 2.81
ITPKC-202ENST00000597003 THOC2Q8NI27 1593 aaKnown RBP32.56■■■□□ 2.8
ITPKC-202ENST00000597003 CFTRP13569 1480 aa32.37■■■□□ 2.77
ITPKC-202ENST00000597003 MRC2Q9UBG0 1479 aa32.33■■■□□ 2.77
ITPKC-202ENST00000597003 FANCD2Q9BXW9 1451 aa32.31■■■□□ 2.76
ITPKC-202ENST00000597003 CEP164Q9UPV0 1460 aa32.3■■■□□ 2.76
ITPKC-202ENST00000597003 DNAJC5Q9H3Z4 198 aa32.3■■■□□ 2.76
ITPKC-202ENST00000597003 CCDC88BA6NC98 1476 aa32.29■■■□□ 2.76
ITPKC-202ENST00000597003 WDR62O43379 1518 aa32.21■■■□□ 2.75
ITPKC-202ENST00000597003 PRDM2Q13029 1718 aa32.06■■■□□ 2.72
ITPKC-202ENST00000597003 URB2Q14146 1524 aaKnown RBP32.02■■■□□ 2.72
ITPKC-202ENST00000597003 SUPT5HO00267 1087 aaKnown RBP31.89■■■□□ 2.7
ITPKC-202ENST00000597003 TOPBP1Q92547 1522 aa31.75■■■□□ 2.67
ITPKC-202ENST00000597003 ABCC8Q09428 1581 aa31.66■■■□□ 2.66
ITPKC-202ENST00000597003 DNMBPQ6XZF7 1577 aa31.65■■■□□ 2.66
ITPKC-202ENST00000597003 IFT140Q96RY7 1462 aa31.62■■■□□ 2.65
ITPKC-202ENST00000597003 ZNF608Q9ULD9 1512 aaPredicted RBP31.57■■■□□ 2.64
ITPKC-202ENST00000597003 POLA1P09884 1462 aaPredicted RBP31.45■■■□□ 2.62
ITPKC-202ENST00000597003 OSCARQ8IYS5 282 aa31.42■■■□□ 2.62
ITPKC-202ENST00000597003 TARBP1Q13395 1621 aaKnown RBP31.41■■■□□ 2.62
ITPKC-202ENST00000597003 EIF4G3O43432 1585 aaKnown RBP31.39■■■□□ 2.61
ITPKC-202ENST00000597003 RAD54L2Q9Y4B4 1467 aa31.38■■■□□ 2.61
ITPKC-202ENST00000597003 CUX1P39880 1505 aa31.37■■■□□ 2.61
ITPKC-202ENST00000597003 AQRO60306 1485 aaKnown RBP eCLIP31.36■■■□□ 2.61
ITPKC-202ENST00000597003 SOGA1O94964 1423 aa31.34■■■□□ 2.61
ITPKC-202ENST00000597003 FGD5Q6ZNL6 1462 aa31.33■■■□□ 2.61
ITPKC-202ENST00000597003 TDRD9Q8NDG6 1382 aaKnown RBP31.25■■■□□ 2.59
ITPKC-202ENST00000597003 TRIM41Q8WV44 630 aa31.17■■■□□ 2.58
ITPKC-202ENST00000597003 FBLN2P98095 1184 aa31.13■■■□□ 2.57
ITPKC-202ENST00000597003 CHD1O14646 1710 aa31.09■■■□□ 2.57
ITPKC-202ENST00000597003 WDR97A6NE52 1622 aa31.06■■■□□ 2.56
ITPKC-202ENST00000597003 SNAPC4Q5SXM2 1469 aa31.03■■■□□ 2.56
ITPKC-202ENST00000597003 WRNQ14191 1432 aaPredicted RBP eCLIP31.02■■■□□ 2.56
ITPKC-202ENST00000597003 GRIN2BQ13224 1484 aa30.99■■■□□ 2.55
ITPKC-202ENST00000597003 ABCA10Q8WWZ4 1543 aa30.97■■■□□ 2.55
ITPKC-202ENST00000597003 SYNJ1O43426 1573 aa30.96■■■□□ 2.55
ITPKC-202ENST00000597003 GAPVD1Q14C86 1478 aa30.95■■■□□ 2.55
ITPKC-202ENST00000597003 TOP2BQ02880 1626 aa30.95■■■□□ 2.55
ITPKC-202ENST00000597003 BIVM-ERCC5R4GMW8 1640 aa30.95■■■□□ 2.54
ITPKC-202ENST00000597003 RIMBP3CA6NJZ7 1639 aa30.93■■■□□ 2.54
ITPKC-202ENST00000597003 RIMBP3BA6NNM3 1639 aa30.93■■■□□ 2.54
ITPKC-202ENST00000597003 RIMBP3Q9UFD9 1639 aa30.93■■■□□ 2.54
ITPKC-202ENST00000597003 CHMP7Q8WUX9 453 aaPredicted RBP30.92■■■□□ 2.54
ITPKC-202ENST00000597003 MAGI1Q96QZ7 1491 aaPredicted RBP30.92■■■□□ 2.54
ITPKC-202ENST00000597003 PBRM1Q86U86 1689 aa30.89■■■□□ 2.54
ITPKC-202ENST00000597003 ARHGEF11O15085 1522 aa30.88■■■□□ 2.53
ITPKC-202ENST00000597003 ABCA5Q8WWZ7 1642 aa30.87■■■□□ 2.53
ITPKC-202ENST00000597003 SYNJ2O15056 1496 aa30.82■■■□□ 2.53
ITPKC-202ENST00000597003 CLASP1Q7Z460 1538 aa30.7■■■□□ 2.51
ITPKC-202ENST00000597003 CYB5RLQ6IPT4 315 aa30.7■■■□□ 2.51
ITPKC-202ENST00000597003 ADAMTS12P58397 1594 aa30.62■■■□□ 2.49
ITPKC-202ENST00000597003 ARAP1Q96P48 1450 aa30.62■■■□□ 2.49
ITPKC-202ENST00000597003 GRIN2AQ12879 1464 aa30.59■■■□□ 2.49
ITPKC-202ENST00000597003 ERICH3Q5RHP9 1530 aa30.57■■■□□ 2.49
ITPKC-202ENST00000597003 FHAD1B1AJZ9 1412 aa30.56■■■□□ 2.48
ITPKC-202ENST00000597003 CEP170Q5SW79 1584 aa30.47■■■□□ 2.47
ITPKC-202ENST00000597003 NUP160Q12769 1436 aa30.46■■■□□ 2.47
ITPKC-202ENST00000597003 KIF27Q86VH2 1401 aa30.39■■■□□ 2.46
ITPKC-202ENST00000597003 IGF1RP08069 1367 aa30.34■■■□□ 2.45
ITPKC-202ENST00000597003 ERCC6L2Q5T890 1561 aa30.32■■■□□ 2.45
ITPKC-202ENST00000597003 SHROOM2Q13796 1616 aa30.25■■■□□ 2.43
ITPKC-202ENST00000597003 TRHP20396 242 aaPredicted RBP30.23■■■□□ 2.43
ITPKC-202ENST00000597003 CUL7Q14999 1698 aa30.21■■■□□ 2.43
ITPKC-202ENST00000597003 JPH4Q96JJ6 628 aa30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms