Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.124e-14■□□□□ 10.8
RPS3P23396 HNRNPU-209ENST00000476241 4844 ntTSL 515.49■□□□□ 0.074e-14■□□□□ 10.8
RPS3P23396 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.064e-14■□□□□ 10.8
RPS3P23396 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.174e-14■□□□□ 10.8
RPS3P23396 IGF2R-204ENST00000475834 758 ntTSL 211.28□□□□□ -0.61e-6■□□□□ 10.8
RPS3P23396 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.272e-6■□□□□ 10.8
RPS3P23396 SLC38A2-204ENST00000548111 583 ntTSL 42.52□□□□□ -2.017e-25■□□□□ 10.8
RPS3P23396 SLC38A2-205ENST00000548236 865 ntTSL 22.15□□□□□ -2.077e-25■□□□□ 10.8
RPS3P23396 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.894e-8■□□□□ 10.8
RPS3P23396 VAPA-207ENST00000583879 719 ntTSL 25.01□□□□□ -1.614e-8■□□□□ 10.8
RPS3P23396 VAPA-208ENST00000584796 654 ntTSL 31.75□□□□□ -2.134e-8■□□□□ 10.8
RPS3P23396 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.99■□□□□ 0.631e-11■□□□□ 10.8
RPS3P23396 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.431e-11■□□□□ 10.8
RPS3P23396 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.411e-11■□□□□ 10.8
RPS3P23396 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.95■□□□□ 0.141e-11■□□□□ 10.8
RPS3P23396 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.93■□□□□ 0.141e-11■□□□□ 10.8
RPS3P23396 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.581e-7■□□□□ 10.8
RPS3P23396 IL4I1-208ENST00000601717 2261 ntTSL 1 (best)18.63■□□□□ 0.571e-7■□□□□ 10.8
RPS3P23396 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.321e-7■□□□□ 10.8
RPS3P23396 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.31e-7■□□□□ 10.8
RPS3P23396 IL4I1-206ENST00000596022 747 ntTSL 216.64■□□□□ 0.251e-7■□□□□ 10.8
RPS3P23396 NUP62-206ENST00000595463 563 ntTSL 415.61■□□□□ 0.091e-7■□□□□ 10.8
RPS3P23396 NUP62-204ENST00000594673 564 ntTSL 515.56■□□□□ 0.081e-7■□□□□ 10.8
RPS3P23396 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.13■□□□□ 0.011e-7■□□□□ 10.8
RPS3P23396 NUP62-219ENST00000599830 588 ntTSL 414.25□□□□□ -0.131e-7■□□□□ 10.8
RPS3P23396 AAAS-213ENST00000549450 581 ntTSL 513.9□□□□□ -0.181e-7■□□□□ 10.8
RPS3P23396 AAAS-214ENST00000549821 596 ntTSL 312.73□□□□□ -0.371e-7■□□□□ 10.8
RPS3P23396 AAAS-218ENST00000551724 552 ntTSL 412.58□□□□□ -0.41e-7■□□□□ 10.8
RPS3P23396 AAAS-219ENST00000552161 585 ntTSL 212.24□□□□□ -0.451e-7■□□□□ 10.8
RPS3P23396 NUP62-214ENST00000598301 565 ntTSL 412.19□□□□□ -0.461e-7■□□□□ 10.8
RPS3P23396 NUP62-215ENST00000599186 466 ntTSL 512.19□□□□□ -0.461e-7■□□□□ 10.8
RPS3P23396 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.471e-7■□□□□ 10.8
RPS3P23396 IL4I1-205ENST00000596011 714 ntTSL 212.08□□□□□ -0.481e-7■□□□□ 10.8
RPS3P23396 NUP62-201ENST00000352066 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.491e-7■□□□□ 10.8
RPS3P23396 IL4I1-207ENST00000597295 651 ntTSL 311.82□□□□□ -0.521e-7■□□□□ 10.8
RPS3P23396 AAAS-210ENST00000548258 550 ntTSL 511.79□□□□□ -0.521e-7■□□□□ 10.8
RPS3P23396 NUP62-223ENST00000601665 531 ntTSL 511.45□□□□□ -0.581e-7■□□□□ 10.8
RPS3P23396 NUP62-209ENST00000596437 894 ntTSL 411.34□□□□□ -0.591e-7■□□□□ 10.8
RPS3P23396 NUP62-220ENST00000600583 782 ntTSL 411.21□□□□□ -0.611e-7■□□□□ 10.8
RPS3P23396 NUP62-216ENST00000599560 562 ntTSL 211.15□□□□□ -0.621e-7■□□□□ 10.8
RPS3P23396 NUP62-222ENST00000600935 587 ntTSL 410.28□□□□□ -0.761e-7■□□□□ 10.8
RPS3P23396 NUP62-218ENST00000599788 564 ntTSL 49.87□□□□□ -0.831e-7■□□□□ 10.8
RPS3P23396 AC011452.1-201ENST00000451973 575 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.841e-7■□□□□ 10.8
RPS3P23396 NUP62-202ENST00000422090 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.841e-7■□□□□ 10.8
RPS3P23396 NUP62-203ENST00000593652 905 ntTSL 29.3□□□□□ -0.921e-7■□□□□ 10.8
RPS3P23396 AAAS-204ENST00000546562 627 ntTSL 29□□□□□ -0.971e-7■□□□□ 10.8
RPS3P23396 NUP62-217ENST00000599567 579 ntTSL 48.34□□□□□ -1.071e-7■□□□□ 10.8
RPS3P23396 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC7.91□□□□□ -1.141e-7■□□□□ 10.8
RPS3P23396 NUP62-213ENST00000597814 510 ntTSL 47.11□□□□□ -1.271e-7■□□□□ 10.8
RPS3P23396 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.79□□□□□ -1.321e-7■□□□□ 10.8
RPS3P23396 AAAS-211ENST00000548880 577 ntTSL 26.09□□□□□ -1.431e-7■□□□□ 10.8
RPS3P23396 NUP62-210ENST00000596680 473 ntTSL 25.87□□□□□ -1.471e-7■□□□□ 10.8
RPS3P23396 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.581e-7■□□□□ 10.8
RPS3P23396 PIK3C3-213ENST00000590220 168 ntTSL 35.09□□□□□ -1.591e-7■□□□□ 10.8
RPS3P23396 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.97□□□□□ -1.611e-7■□□□□ 10.8
RPS3P23396 ETNK1-205ENST00000544191 500 ntTSL 21.47□□□□□ -2.171e-7■□□□□ 10.8
RPS3P23396 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.147e-7■□□□□ 10.8
RPS3P23396 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.15■□□□□ 0.027e-7■□□□□ 10.8
RPS3P23396 CISH-203ENST00000491847 5042 ntTSL 1 (best)12.56□□□□□ -0.47e-7■□□□□ 10.8
RPS3P23396 RPL13-209ENST00000491523 698 ntTSL 322.13■■□□□ 1.131e-18■□□□□ 10.8
RPS3P23396 RPL13-205ENST00000467736 528 ntTSL 316.27■□□□□ 0.21e-18■□□□□ 10.8
RPS3P23396 RPL13-211ENST00000563270 554 ntTSL 414.82□□□□□ -0.041e-18■□□□□ 10.8
RPS3P23396 RPL13-213ENST00000565571 568 ntTSL 213.59□□□□□ -0.231e-18■□□□□ 10.8
RPS3P23396 BUB1-201ENST00000302759 3507 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.862e-7■□□□□ 10.8
RPS3P23396 BUB1-212ENST00000535254 3576 ntTSL 2 BASIC8.94□□□□□ -0.982e-7■□□□□ 10.8
RPS3P23396 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.04□□□□□ -1.282e-7■□□□□ 10.8
RPS3P23396 BUB1-207ENST00000466333 2501 ntTSL 1 (best)5.64□□□□□ -1.512e-7■□□□□ 10.8
RPS3P23396 FCGRT-204ENST00000593381 566 ntTSL 413.14□□□□□ -0.315e-7■□□□□ 10.8
RPS3P23396 RBBP6-211ENST00000568316 556 ntTSL 524.4■■□□□ 1.51e-9■□□□□ 10.8
RPS3P23396 RBBP6-210ENST00000568015 695 ntTSL 315.71■□□□□ 0.111e-9■□□□□ 10.8
RPS3P23396 RBBP6-207ENST00000564314 3361 ntTSL 27.97□□□□□ -1.131e-9■□□□□ 10.8
RPS3P23396 RBBP6-209ENST00000567686 1138 ntTSL 54.87□□□□□ -1.631e-9■□□□□ 10.8
RPS3P23396 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.88■■□□□ 1.574e-7■□□□□ 10.8
RPS3P23396 PSME2-205ENST00000559005 496 ntTSL 28.69□□□□□ -1.025e-11■□□□□ 10.8
RPS3P23396 A2M-205ENST00000472360 692 ntTSL 26.94□□□□□ -1.36e-43■□□□□ 10.8
RPS3P23396 TFRC-215ENST00000491658 396 ntTSL 50.86□□□□□ -2.272e-9■□□□□ 10.8
RPS3P23396 PRPF8-210ENST00000574217 310 ntTSL 26.61□□□□□ -1.352e-7■□□□□ 10.8
RPS3P23396 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.421e-8■□□□□ 10.8
RPS3P23396 DUSP9-203ENST00000477033 430 ntTSL 319.5■□□□□ 0.716e-30■□□□□ 10.8
RPS3P23396 VIM-205ENST00000485947 1139 ntTSL 216.63■□□□□ 0.252e-6■□□□□ 10.8
RPS3P23396 TNFRSF19-205ENST00000464735 660 ntTSL 216.04■□□□□ 0.164e-7■□□□□ 10.8
RPS3P23396 HNRNPA1-209ENST00000550482 832 ntTSL 214.49□□□□□ -0.092e-22■□□□□ 10.8
RPS3P23396 HNRNPC-204ENST00000449098 1599 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.513e-12■□□□□ 10.8
RPS3P23396 HNRNPC-206ENST00000553444 724 ntTSL 210.99□□□□□ -0.653e-12■□□□□ 10.8
RPS3P23396 HNRNPC-227ENST00000556897 1252 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.053e-12■□□□□ 10.8
RPS3P23396 HNRNPC-229ENST00000557157 698 ntTSL 54.45□□□□□ -1.73e-12■□□□□ 10.8
RPS3P23396 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.863e-12■□□□□ 10.8
RPS3P23396 ATXN2L-207ENST00000561732 643 ntTSL 218.56■□□□□ 0.561e-8■□□□□ 10.8
RPS3P23396 NMT1-211ENST00000591931 748 ntTSL 216.78■□□□□ 0.281e-8■□□□□ 10.8
RPS3P23396 ATXN2L-212ENST00000564035 786 ntTSL 215.92■□□□□ 0.141e-8■□□□□ 10.8
RPS3P23396 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.29□□□□□ -0.121e-8■□□□□ 10.8
RPS3P23396 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.47□□□□□ -0.251e-8■□□□□ 10.8
RPS3P23396 TRIT1-205ENST00000462797 2000 ntTSL 512.68□□□□□ -0.381e-8■□□□□ 10.8
RPS3P23396 TRIT1-201ENST00000316891 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.391e-8■□□□□ 10.8
RPS3P23396 TRIT1-212ENST00000492612 983 ntTSL 511.65□□□□□ -0.541e-8■□□□□ 10.8
RPS3P23396 TRIT1-215ENST00000541099 545 ntTSL 1 (best) BASIC11.45□□□□□ -0.581e-8■□□□□ 10.8
RPS3P23396 TRIT1-213ENST00000495175 1156 ntTSL 1 (best)10.97□□□□□ -0.651e-8■□□□□ 10.8
RPS3P23396 TRIT1-211ENST00000491865 738 ntTSL 59.99□□□□□ -0.811e-8■□□□□ 10.8
RPS3P23396 TRIT1-203ENST00000441669 1851 ntTSL 1 (best) BASIC8.88□□□□□ -0.991e-8■□□□□ 10.8
RPS3P23396 TRIT1-206ENST00000465417 499 ntTSL 52.85□□□□□ -1.951e-8■□□□□ 10.8
Retrieved 100 of 24,271 protein–RNA pairs in 488.2 ms