RNA–Protein interactions for RNA: ENST00000599830.1

NUP62-219, Transcript of nucleoporin 62, humanhuman

TSL 4

Gene NUP62, Length 588 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP62-219ENST00000599830 NISCHQ9Y2I1 1504 aa36.8■■■■□ 3.48
NUP62-219ENST00000599830 CCDC180Q9P1Z9 1646 aa32.99■■■□□ 2.87
NUP62-219ENST00000599830 ABCC9O60706 1549 aa32.97■■■□□ 2.87
NUP62-219ENST00000599830 RB1CC1Q8TDY2 1594 aa31.44■■■□□ 2.62
NUP62-219ENST00000599830 DCAF8L2P0C7V8 631 aa31.28■■■□□ 2.6
NUP62-219ENST00000599830 NACADO15069 1562 aa31.22■■■□□ 2.59
NUP62-219ENST00000599830 DNAJC5BQ9UF47 199 aa30.78■■■□□ 2.52
NUP62-219ENST00000599830 MYO15BQ96JP2 1530 aa30.76■■■□□ 2.51
NUP62-219ENST00000599830 PABPN1Q86U42 306 aaKnown RBP eCLIP30.74■■■□□ 2.51
NUP62-219ENST00000599830 UNC13AQ9UPW8 1703 aa30.61■■■□□ 2.49
NUP62-219ENST00000599830 ZCCHC6Q5VYS8 1495 aaKnown RBP30.48■■■□□ 2.47
NUP62-219ENST00000599830 DCAF1Q9Y4B6 1507 aa30.39■■■□□ 2.46
NUP62-219ENST00000599830 BICRAQ9NZM4 1560 aa30.37■■■□□ 2.45
NUP62-219ENST00000599830 SCRIBQ14160 1630 aa30.08■■■□□ 2.41
NUP62-219ENST00000599830 SHROOM4Q9ULL8 1493 aa30.08■■■□□ 2.41
NUP62-219ENST00000599830 CC2D2AQ9P2K1 1620 aa29.75■■■□□ 2.35
NUP62-219ENST00000599830 EIF4G1Q04637 1599 aaKnown RBP29.7■■■□□ 2.35
NUP62-219ENST00000599830 CECR2Q9BXF3 1484 aa29.7■■■□□ 2.35
NUP62-219ENST00000599830 NCAPD3P42695 1498 aa28.79■■■□□ 2.2
NUP62-219ENST00000599830 ATAD2BQ9ULI0 1458 aa28.71■■■□□ 2.19
NUP62-219ENST00000599830 SMARCA2P51531 1590 aa28.69■■■□□ 2.18
NUP62-219ENST00000599830 SMARCA4P51532 1647 aa28.69■■■□□ 2.18
NUP62-219ENST00000599830 BAZ1AQ9NRL2 1556 aaPredicted RBP28.61■■■□□ 2.17
NUP62-219ENST00000599830 HMGXB3Q12766 1538 aa28.57■■■□□ 2.16
NUP62-219ENST00000599830 ERCC6Q03468 1493 aa28.55■■■□□ 2.16
NUP62-219ENST00000599830 BAZ1BQ9UIG0 1483 aaKnown RBP28.49■■■□□ 2.15
NUP62-219ENST00000599830 CUX2O14529 1486 aa28.4■■■□□ 2.14
NUP62-219ENST00000599830 PEG3Q9GZU2 1588 aa28.37■■■□□ 2.13
NUP62-219ENST00000599830 MROH2BQ7Z745 1585 aa28.33■■■□□ 2.13
NUP62-219ENST00000599830 DNAJC5Q9H3Z4 198 aa28.32■■■□□ 2.12
NUP62-219ENST00000599830 NESP48681 1621 aa28.29■■■□□ 2.12
NUP62-219ENST00000599830 LAMC3Q9Y6N6 1575 aa28.16■■■□□ 2.1
NUP62-219ENST00000599830 PDS5BQ9NTI5 1447 aa28.07■■■□□ 2.08
NUP62-219ENST00000599830 WIZO95785 1651 aa28.01■■■□□ 2.07
NUP62-219ENST00000599830 CADPSQ9ULU8 1353 aa27.97■■■□□ 2.07
NUP62-219ENST00000599830 THOC2Q8NI27 1593 aaKnown RBP27.94■■■□□ 2.06
NUP62-219ENST00000599830 KIF21AQ7Z4S6 1674 aa27.94■■■□□ 2.06
NUP62-219ENST00000599830 RSF1Q96T23 1441 aaPredicted RBP27.8■■■□□ 2.04
NUP62-219ENST00000599830 MRC2Q9UBG0 1479 aa27.75■■■□□ 2.03
NUP62-219ENST00000599830 CEP164Q9UPV0 1460 aa27.69■■■□□ 2.02
NUP62-219ENST00000599830 TOP2AP11388 1531 aaKnown RBP27.68■■■□□ 2.02
NUP62-219ENST00000599830 FANCD2Q9BXW9 1451 aa27.64■■■□□ 2.01
NUP62-219ENST00000599830 WDR62O43379 1518 aa27.62■■■□□ 2.01
NUP62-219ENST00000599830 CFTRP13569 1480 aa27.62■■■□□ 2.01
NUP62-219ENST00000599830 CCDC88BA6NC98 1476 aa27.38■■□□□ 1.97
NUP62-219ENST00000599830 PRDM2Q13029 1718 aa27.35■■□□□ 1.97
NUP62-219ENST00000599830 URB2Q14146 1524 aaKnown RBP27.34■■□□□ 1.97
NUP62-219ENST00000599830 OSCARQ8IYS5 282 aa27.22■■□□□ 1.95
NUP62-219ENST00000599830 TRIM41Q8WV44 630 aa27.2■■□□□ 1.94
NUP62-219ENST00000599830 ABCC8Q09428 1581 aa27.14■■□□□ 1.94
NUP62-219ENST00000599830 IFT140Q96RY7 1462 aa27.13■■□□□ 1.93
NUP62-219ENST00000599830 TOPBP1Q92547 1522 aa27.09■■□□□ 1.93
NUP62-219ENST00000599830 DNMBPQ6XZF7 1577 aa27.01■■□□□ 1.91
NUP62-219ENST00000599830 ZNF608Q9ULD9 1512 aaPredicted RBP27■■□□□ 1.91
NUP62-219ENST00000599830 EIF4G3O43432 1585 aaKnown RBP26.86■■□□□ 1.89
NUP62-219ENST00000599830 AQRO60306 1485 aaKnown RBP eCLIP26.81■■□□□ 1.881e-7■■■□□ 18.3
NUP62-219ENST00000599830 POLA1P09884 1462 aaPredicted RBP26.81■■□□□ 1.88
NUP62-219ENST00000599830 TARBP1Q13395 1621 aaKnown RBP26.8■■□□□ 1.88
NUP62-219ENST00000599830 SUPT5HO00267 1087 aaKnown RBP26.8■■□□□ 1.88
NUP62-219ENST00000599830 FBLN2P98095 1184 aa26.79■■□□□ 1.88
NUP62-219ENST00000599830 SOGA1O94964 1423 aa26.77■■□□□ 1.88
NUP62-219ENST00000599830 RAD54L2Q9Y4B4 1467 aa26.72■■□□□ 1.87
NUP62-219ENST00000599830 RIMBP3CA6NJZ7 1639 aa26.72■■□□□ 1.87
NUP62-219ENST00000599830 RIMBP3BA6NNM3 1639 aa26.72■■□□□ 1.87
NUP62-219ENST00000599830 RIMBP3Q9UFD9 1639 aa26.72■■□□□ 1.87
NUP62-219ENST00000599830 TDRD9Q8NDG6 1382 aaKnown RBP26.69■■□□□ 1.86
NUP62-219ENST00000599830 FGD5Q6ZNL6 1462 aa26.68■■□□□ 1.86
NUP62-219ENST00000599830 CHD1O14646 1710 aa26.66■■□□□ 1.86
NUP62-219ENST00000599830 ARHGEF11O15085 1522 aa26.65■■□□□ 1.86
NUP62-219ENST00000599830 CUX1P39880 1505 aa26.61■■□□□ 1.85
NUP62-219ENST00000599830 WDR97A6NE52 1622 aa26.61■■□□□ 1.85
NUP62-219ENST00000599830 CHMP7Q8WUX9 453 aaPredicted RBP26.59■■□□□ 1.85
NUP62-219ENST00000599830 CYB5RLQ6IPT4 315 aa26.57■■□□□ 1.84
NUP62-219ENST00000599830 SNAPC4Q5SXM2 1469 aa26.54■■□□□ 1.84
NUP62-219ENST00000599830 GRIN2BQ13224 1484 aa26.51■■□□□ 1.83
NUP62-219ENST00000599830 MAGI1Q96QZ7 1491 aaPredicted RBP26.49■■□□□ 1.83
NUP62-219ENST00000599830 SYNJ1O43426 1573 aa26.43■■□□□ 1.82
NUP62-219ENST00000599830 GAPVD1Q14C86 1478 aa26.42■■□□□ 1.82
NUP62-219ENST00000599830 SYNJ2O15056 1496 aa26.4■■□□□ 1.82
NUP62-219ENST00000599830 ABCA10Q8WWZ4 1543 aa26.37■■□□□ 1.81
NUP62-219ENST00000599830 PBRM1Q86U86 1689 aa26.37■■□□□ 1.81
NUP62-219ENST00000599830 ARAP1Q96P48 1450 aa26.36■■□□□ 1.81
NUP62-219ENST00000599830 WRNQ14191 1432 aaPredicted RBP eCLIP26.35■■□□□ 1.81
NUP62-219ENST00000599830 TRHP20396 242 aaPredicted RBP26.33■■□□□ 1.81
NUP62-219ENST00000599830 CLASP1Q7Z460 1538 aa26.31■■□□□ 1.8
NUP62-219ENST00000599830 ABCA5Q8WWZ7 1642 aa26.28■■□□□ 1.8
NUP62-219ENST00000599830 TOP2BQ02880 1626 aa26.25■■□□□ 1.79
NUP62-219ENST00000599830 BIVM-ERCC5R4GMW8 1640 aa26.23■■□□□ 1.79
NUP62-219ENST00000599830 GRIN2AQ12879 1464 aa26.14■■□□□ 1.78
NUP62-219ENST00000599830 FHAD1B1AJZ9 1412 aa26.1■■□□□ 1.77
NUP62-219ENST00000599830 ADAMTS12P58397 1594 aa26.08■■□□□ 1.77
NUP62-219ENST00000599830 ERICH3Q5RHP9 1530 aa26.06■■□□□ 1.76
NUP62-219ENST00000599830 NUP160Q12769 1436 aa26.01■■□□□ 1.75
NUP62-219ENST00000599830 CEP170Q5SW79 1584 aa25.99■■□□□ 1.75
NUP62-219ENST00000599830 ERCC6L2Q5T890 1561 aa25.89■■□□□ 1.73
NUP62-219ENST00000599830 JPH4Q96JJ6 628 aa25.87■■□□□ 1.73
NUP62-219ENST00000599830 SHROOM2Q13796 1616 aa25.86■■□□□ 1.73
NUP62-219ENST00000599830 KIF27Q86VH2 1401 aa25.83■■□□□ 1.73
NUP62-219ENST00000599830 PRG4Q92954 1404 aaPredicted RBP25.83■■□□□ 1.73
NUP62-219ENST00000599830 IGF1RP08069 1367 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms