RNA–Protein interactions for RNA: ENST00000491847.1

CISH-203, Transcript of cytokine inducible SH2 containing protein, humanhuman

TSL 1 (best)

Gene CISH, Length 5,042 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CISH-203ENST00000491847 DCAF8L2P0C7V8 631 aa22.21■■□□□ 1.15
CISH-203ENST00000491847 NISCHQ9Y2I1 1504 aa22.13■■□□□ 1.13
CISH-203ENST00000491847 SUPT5HO00267 1087 aaKnown RBP21.12■□□□□ 0.97
CISH-203ENST00000491847 SHROOM4Q9ULL8 1493 aa20.61■□□□□ 0.89
CISH-203ENST00000491847 PELP1Q8IZL8 1130 aaKnown RBP20.6■□□□□ 0.89
CISH-203ENST00000491847 EHMT2Q96KQ7 1210 aa20.37■□□□□ 0.85
CISH-203ENST00000491847 PCGF6Q9BYE7 350 aa20.17■□□□□ 0.82
CISH-203ENST00000491847 APLP2Q06481 763 aa20.05■□□□□ 0.8
CISH-203ENST00000491847 CENPBP07199 599 aaPredicted RBP19.96■□□□□ 0.79
CISH-203ENST00000491847 FAM9AQ8IZU1 332 aaPredicted RBP19.91■□□□□ 0.78
CISH-203ENST00000491847 ZEB1P37275 1124 aaPredicted RBP19.9■□□□□ 0.78
CISH-203ENST00000491847 TTBK1Q5TCY1 1321 aaPredicted RBP19.77■□□□□ 0.76
CISH-203ENST00000491847 ERICH6Q7L0X2 663 aa19.72■□□□□ 0.75
CISH-203ENST00000491847 MYT1Q01538 1121 aa19.69■□□□□ 0.74
CISH-203ENST00000491847 CCER1Q8TC90 406 aaPredicted RBP19.69■□□□□ 0.74
CISH-203ENST00000491847 TRIM41Q8WV44 630 aa19.52■□□□□ 0.72
CISH-203ENST00000491847 YTHDC1Q96MU7 727 aaKnown RBP19.4■□□□□ 0.7
CISH-203ENST00000491847 NEFLP07196 543 aa19.39■□□□□ 0.69
CISH-203ENST00000491847 RANGAP1P46060 587 aaPredicted RBP19.36■□□□□ 0.69
CISH-203ENST00000491847 HRCP23327 699 aa19.32■□□□□ 0.68
CISH-203ENST00000491847 UBTFP17480 764 aaKnown RBP19.26■□□□□ 0.67
CISH-203ENST00000491847 TRIM26Q12899 539 aaPredicted RBP19.25■□□□□ 0.67
CISH-203ENST00000491847 ATP1B4Q9UN42 357 aaPredicted RBP19.15■□□□□ 0.66
CISH-203ENST00000491847 PPARGC1BQ86YN6 1023 aaKnown RBP19.12■□□□□ 0.65
CISH-203ENST00000491847 ABCC9O60706 1549 aa19.08■□□□□ 0.64
CISH-203ENST00000491847 LOC105371045A0A1W2PR82 267 aa18.88■□□□□ 0.61
CISH-203ENST00000491847 CHIC1Q5VXU3 224 aa18.86■□□□□ 0.61
CISH-203ENST00000491847 PABPN1Q86U42 306 aaKnown RBP eCLIP18.79■□□□□ 0.6
CISH-203ENST00000491847 DAXXQ9UER7 740 aaPredicted RBP18.78■□□□□ 0.6
CISH-203ENST00000491847 HNRNPUL2Q1KMD3 747 aaKnown RBP18.71■□□□□ 0.59
CISH-203ENST00000491847 ITGAEP38570 1179 aa18.71■□□□□ 0.58
CISH-203ENST00000491847 DIEXFQ68CQ4 756 aaKnown RBP18.71■□□□□ 0.58
CISH-203ENST00000491847 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.63■□□□□ 0.57
CISH-203ENST00000491847 POLR3GLQ9BT43 218 aa18.6■□□□□ 0.57
CISH-203ENST00000491847 RTL5Q5HYW3 569 aaPredicted RBP18.53■□□□□ 0.56
CISH-203ENST00000491847 GTF3C3Q9Y5Q9 886 aa18.5■□□□□ 0.55
CISH-203ENST00000491847 MYT1LQ9UL68 1186 aa18.49■□□□□ 0.55
CISH-203ENST00000491847 CNGB1Q14028 1251 aaPredicted RBP18.46■□□□□ 0.55
CISH-203ENST00000491847 CCDC180Q9P1Z9 1646 aa18.37■□□□□ 0.53
CISH-203ENST00000491847 ZNF316A6NFI3 1004 aaPredicted RBP18.34■□□□□ 0.53
CISH-203ENST00000491847 ZCCHC6Q5VYS8 1495 aaKnown RBP18.31■□□□□ 0.52
CISH-203ENST00000491847 BCANQ96GW7 911 aa18.31■□□□□ 0.52
CISH-203ENST00000491847 CLSPNQ9HAW4 1339 aa18.3■□□□□ 0.52
CISH-203ENST00000491847 ACIN1Q9UKV3 1341 aaKnown RBP18.25■□□□□ 0.51
CISH-203ENST00000491847 SCRIBQ14160 1630 aa18.24■□□□□ 0.51
CISH-203ENST00000491847 CDK11AQ9UQ88 783 aaPredicted RBP18.21■□□□□ 0.51
CISH-203ENST00000491847 FAM50AQ14320 339 aaKnown RBP18.17■□□□□ 0.5
CISH-203ENST00000491847 ANP32CO43423 234 aa18.16■□□□□ 0.5
CISH-203ENST00000491847 NEUROD1Q13562 356 aa18.15■□□□□ 0.5
CISH-203ENST00000491847 FBLN2P98095 1184 aa18.13■□□□□ 0.49
CISH-203ENST00000491847 SLC4A1APQ9BWU0 796 aaKnown RBP18.08■□□□□ 0.49
CISH-203ENST00000491847 TRIM52Q96A61 297 aa18.07■□□□□ 0.48
CISH-203ENST00000491847 RB1CC1Q8TDY2 1594 aa18.06■□□□□ 0.48
CISH-203ENST00000491847 CSRNP3Q8WYN3 585 aa18.04■□□□□ 0.48
CISH-203ENST00000491847 NACADO15069 1562 aa17.92■□□□□ 0.46
CISH-203ENST00000491847 ANP32AP39687 249 aaKnown RBP17.91■□□□□ 0.46
CISH-203ENST00000491847 ZNF326Q5BKZ1 582 aaKnown RBP17.89■□□□□ 0.45
CISH-203ENST00000491847 FKBP8Q14318 412 aa17.81■□□□□ 0.44
CISH-203ENST00000491847 ZBTB47Q9UFB7 747 aaPredicted RBP17.8■□□□□ 0.44
CISH-203ENST00000491847 P3H3Q8IVL6 736 aa17.79■□□□□ 0.44
CISH-203ENST00000491847 CANXP27824 592 aaKnown RBP17.75■□□□□ 0.43
CISH-203ENST00000491847 NPM2Q86SE8 214 aaKnown RBP17.74■□□□□ 0.43
CISH-203ENST00000491847 EIF5BO60841 1220 aaKnown RBP17.72■□□□□ 0.43
CISH-203ENST00000491847 NPM1P06748 294 aaKnown RBP eCLIP17.72■□□□□ 0.43
CISH-203ENST00000491847 SCAF1Q9H7N4 1312 aaKnown RBP17.7■□□□□ 0.42
CISH-203ENST00000491847 DCAF1Q9Y4B6 1507 aa17.68■□□□□ 0.42
CISH-203ENST00000491847 HNRNPUQ00839 825 aaKnown RBP eCLIP17.65■□□□□ 0.42
CISH-203ENST00000491847 ARID3CA6NKF2 412 aa17.65■□□□□ 0.42
CISH-203ENST00000491847 ZNF777Q9ULD5 760 aaPredicted RBP17.62■□□□□ 0.41
CISH-203ENST00000491847 DDX10Q13206 875 aaKnown RBP17.62■□□□□ 0.41
CISH-203ENST00000491847 BCL11AQ9H165 835 aa17.61■□□□□ 0.41
CISH-203ENST00000491847 RSF1Q96T23 1441 aaPredicted RBP17.59■□□□□ 0.41
CISH-203ENST00000491847 BAZ1BQ9UIG0 1483 aaKnown RBP17.58■□□□□ 0.41
CISH-203ENST00000491847 CHMP7Q8WUX9 453 aaPredicted RBP17.58■□□□□ 0.4
CISH-203ENST00000491847 ESF1Q9H501 851 aaKnown RBP17.57■□□□□ 0.4
CISH-203ENST00000491847 NEFMP07197 916 aa17.56■□□□□ 0.4
CISH-203ENST00000491847 TONSLQ96HA7 1378 aa17.56■□□□□ 0.4
CISH-203ENST00000491847 ANP32BQ92688 251 aaKnown RBP17.54■□□□□ 0.4
CISH-203ENST00000491847 FAM9BQ8IZU0 186 aa17.53■□□□□ 0.4
CISH-203ENST00000491847 EEA1Q15075 1411 aa17.53■□□□□ 0.4
CISH-203ENST00000491847 MIER1Q8N108 512 aa17.51■□□□□ 0.39
CISH-203ENST00000491847 CCDC136Q96JN2 1154 aa17.51■□□□□ 0.39
CISH-203ENST00000491847 NBR1Q14596 966 aa17.5■□□□□ 0.39
CISH-203ENST00000491847 GLIPR1L2Q4G1C9 344 aa17.49■□□□□ 0.39
CISH-203ENST00000491847 UPF2Q9HAU5 1272 aaKnown RBP17.49■□□□□ 0.39
CISH-203ENST00000491847 BAZ1AQ9NRL2 1556 aaPredicted RBP17.48■□□□□ 0.39
CISH-203ENST00000491847 HSP90AA1P07900 732 aaKnown RBP17.47■□□□□ 0.39
CISH-203ENST00000491847 SLC24A1O60721 1099 aa17.43■□□□□ 0.38
CISH-203ENST00000491847 WRNQ14191 1432 aaPredicted RBP eCLIP17.42■□□□□ 0.38
CISH-203ENST00000491847 MTUS2Q5JR59 1369 aa17.4■□□□□ 0.38
CISH-203ENST00000491847 TSPY4P0CV99 314 aa17.4■□□□□ 0.38
CISH-203ENST00000491847 TSPY10P0CW01 314 aa17.4■□□□□ 0.38
CISH-203ENST00000491847 SALL2Q9Y467 1007 aaPredicted RBP17.4■□□□□ 0.38
CISH-203ENST00000491847 TMC1Q8TDI8 760 aa17.39■□□□□ 0.37
CISH-203ENST00000491847 MRS2Q9HD23 443 aa17.37■□□□□ 0.37
CISH-203ENST00000491847 CLIP1P30622 1438 aa17.37■□□□□ 0.37
CISH-203ENST00000491847 KIF27Q86VH2 1401 aa17.37■□□□□ 0.37
CISH-203ENST00000491847 STAG3Q9UJ98 1225 aa17.36■□□□□ 0.37
CISH-203ENST00000491847 IRX6P78412 446 aaPredicted RBP17.34■□□□□ 0.37
CISH-203ENST00000491847 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 353.7 ms