RNA–Protein interactions for RNA: ENST00000443053.6

CISH-202, Transcript of cytokine inducible SH2 containing protein, humanhuman

TSL 1 (best) BASIC

Gene CISH, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CISH-202ENST00000443053 NISCHQ9Y2I1 1504 aa35.39■■■■□ 3.26
CISH-202ENST00000443053 CCDC180Q9P1Z9 1646 aa30.92■■■□□ 2.54
CISH-202ENST00000443053 ABCC9O60706 1549 aa29.73■■■□□ 2.35
CISH-202ENST00000443053 ZCCHC6Q5VYS8 1495 aaKnown RBP29.62■■■□□ 2.33
CISH-202ENST00000443053 DCAF8L2P0C7V8 631 aa29.56■■■□□ 2.32
CISH-202ENST00000443053 DCAF1Q9Y4B6 1507 aa29.17■■■□□ 2.26
CISH-202ENST00000443053 MYO15BQ96JP2 1530 aa28.94■■■□□ 2.22
CISH-202ENST00000443053 NACADO15069 1562 aa28.92■■■□□ 2.22
CISH-202ENST00000443053 SHROOM4Q9ULL8 1493 aa28.79■■■□□ 2.2
CISH-202ENST00000443053 RB1CC1Q8TDY2 1594 aa28.77■■■□□ 2.2
CISH-202ENST00000443053 SCRIBQ14160 1630 aa28.51■■■□□ 2.15
CISH-202ENST00000443053 UNC13AQ9UPW8 1703 aa28.22■■■□□ 2.11
CISH-202ENST00000443053 PABPN1Q86U42 306 aaKnown RBP eCLIP28.04■■■□□ 2.08
CISH-202ENST00000443053 BICRAQ9NZM4 1560 aa27.95■■■□□ 2.07
CISH-202ENST00000443053 CECR2Q9BXF3 1484 aa27.61■■■□□ 2.01
CISH-202ENST00000443053 SUPT5HO00267 1087 aaKnown RBP27.55■■■□□ 2
CISH-202ENST00000443053 MROH2BQ7Z745 1585 aa27.37■■□□□ 1.97
CISH-202ENST00000443053 RSF1Q96T23 1441 aaPredicted RBP27.36■■□□□ 1.97
CISH-202ENST00000443053 BAZ1AQ9NRL2 1556 aaPredicted RBP27.32■■□□□ 1.96
CISH-202ENST00000443053 SMARCA4P51532 1647 aa27.26■■□□□ 1.95
CISH-202ENST00000443053 EIF4G1Q04637 1599 aaKnown RBP27.13■■□□□ 1.93
CISH-202ENST00000443053 WIZO95785 1651 aa27.13■■□□□ 1.93
CISH-202ENST00000443053 ATAD2BQ9ULI0 1458 aa26.93■■□□□ 1.9
CISH-202ENST00000443053 PEG3Q9GZU2 1588 aa26.89■■□□□ 1.9
CISH-202ENST00000443053 SMARCA2P51531 1590 aa26.85■■□□□ 1.89
CISH-202ENST00000443053 CC2D2AQ9P2K1 1620 aa26.84■■□□□ 1.89
CISH-202ENST00000443053 TOP2AP11388 1531 aaKnown RBP26.76■■□□□ 1.88
CISH-202ENST00000443053 BAZ1BQ9UIG0 1483 aaKnown RBP26.75■■□□□ 1.87
CISH-202ENST00000443053 NCAPD3P42695 1498 aa26.73■■□□□ 1.87
CISH-202ENST00000443053 DNAJC5BQ9UF47 199 aa26.63■■□□□ 1.85
CISH-202ENST00000443053 HMGXB3Q12766 1538 aa26.61■■□□□ 1.85
CISH-202ENST00000443053 CCDC88BA6NC98 1476 aa26.56■■□□□ 1.84
CISH-202ENST00000443053 CHIC1Q5VXU3 224 aa26.13■■□□□ 1.77
CISH-202ENST00000443053 CADPSQ9ULU8 1353 aa26.06■■□□□ 1.76
CISH-202ENST00000443053 CFTRP13569 1480 aa26.05■■□□□ 1.76
CISH-202ENST00000443053 NESP48681 1621 aa26■■□□□ 1.75
CISH-202ENST00000443053 ABCC8Q09428 1581 aa25.92■■□□□ 1.74
CISH-202ENST00000443053 TRIM41Q8WV44 630 aa25.87■■□□□ 1.73
CISH-202ENST00000443053 LAMC3Q9Y6N6 1575 aa25.85■■□□□ 1.73
CISH-202ENST00000443053 PRDM2Q13029 1718 aa25.82■■□□□ 1.72
CISH-202ENST00000443053 FANCD2Q9BXW9 1451 aa25.77■■□□□ 1.72
CISH-202ENST00000443053 WRNQ14191 1432 aaPredicted RBP eCLIP25.75■■□□□ 1.71
CISH-202ENST00000443053 PDS5BQ9NTI5 1447 aa25.71■■□□□ 1.71
CISH-202ENST00000443053 SYNJ1O43426 1573 aa25.65■■□□□ 1.7
CISH-202ENST00000443053 KIF21AQ7Z4S6 1674 aa25.61■■□□□ 1.69
CISH-202ENST00000443053 CEP164Q9UPV0 1460 aa25.61■■□□□ 1.69
CISH-202ENST00000443053 CUX1P39880 1505 aa25.59■■□□□ 1.69
CISH-202ENST00000443053 TOP2BQ02880 1626 aa25.54■■□□□ 1.68
CISH-202ENST00000443053 BIVM-ERCC5R4GMW8 1640 aa25.49■■□□□ 1.67
CISH-202ENST00000443053 ERCC6Q03468 1493 aa25.48■■□□□ 1.67
CISH-202ENST00000443053 FAM9AQ8IZU1 332 aaPredicted RBP25.47■■□□□ 1.67
CISH-202ENST00000443053 URB2Q14146 1524 aaKnown RBP25.47■■□□□ 1.67
CISH-202ENST00000443053 TOPBP1Q92547 1522 aa25.44■■□□□ 1.66
CISH-202ENST00000443053 DNMBPQ6XZF7 1577 aa25.42■■□□□ 1.66
CISH-202ENST00000443053 MRC2Q9UBG0 1479 aa25.38■■□□□ 1.65
CISH-202ENST00000443053 SOGA1O94964 1423 aa25.38■■□□□ 1.65
CISH-202ENST00000443053 FGD5Q6ZNL6 1462 aa25.37■■□□□ 1.65
CISH-202ENST00000443053 RUSC2Q8N2Y8 1516 aa25.33■■□□□ 1.65
CISH-202ENST00000443053 POLA1P09884 1462 aaPredicted RBP25.3■■□□□ 1.64
CISH-202ENST00000443053 RAD54L2Q9Y4B4 1467 aa25.27■■□□□ 1.64
CISH-202ENST00000443053 THOC2Q8NI27 1593 aaKnown RBP25.25■■□□□ 1.63
CISH-202ENST00000443053 WDR62O43379 1518 aa25.24■■□□□ 1.63
CISH-202ENST00000443053 LOC105371045A0A1W2PR82 267 aa25.2■■□□□ 1.62
CISH-202ENST00000443053 EHMT2Q96KQ7 1210 aa25.19■■□□□ 1.62
CISH-202ENST00000443053 CSRNP3Q8WYN3 585 aa25.16■■□□□ 1.62
CISH-202ENST00000443053 CUX2O14529 1486 aa25.16■■□□□ 1.62
CISH-202ENST00000443053 EEA1Q15075 1411 aa25.12■■□□□ 1.61
CISH-202ENST00000443053 KIF27Q86VH2 1401 aa25.11■■□□□ 1.61
CISH-202ENST00000443053 ABCA10Q8WWZ4 1543 aa25.1■■□□□ 1.61
CISH-202ENST00000443053 TDRD9Q8NDG6 1382 aaKnown RBP25.08■■□□□ 1.6
CISH-202ENST00000443053 TARBP1Q13395 1621 aaKnown RBP25.07■■□□□ 1.6
CISH-202ENST00000443053 WDR97A6NE52 1622 aa25.02■■□□□ 1.6
CISH-202ENST00000443053 IFT140Q96RY7 1462 aa25.01■■□□□ 1.59
CISH-202ENST00000443053 IGF1RP08069 1367 aa24.98■■□□□ 1.59
CISH-202ENST00000443053 ZNF608Q9ULD9 1512 aaPredicted RBP24.97■■□□□ 1.59
CISH-202ENST00000443053 AQRO60306 1485 aaKnown RBP eCLIP24.96■■□□□ 1.591e-8■■■■■ 45.6
CISH-202ENST00000443053 GAPVD1Q14C86 1478 aa24.94■■□□□ 1.58
CISH-202ENST00000443053 ABCA5Q8WWZ7 1642 aa24.91■■□□□ 1.58
CISH-202ENST00000443053 PRXQ9BXM0 1461 aa24.85■■□□□ 1.57
CISH-202ENST00000443053 RAPGEF2Q9Y4G8 1499 aa24.84■■□□□ 1.57
CISH-202ENST00000443053 UBTFP17480 764 aaKnown RBP24.84■■□□□ 1.57
CISH-202ENST00000443053 CARMIL1Q5VZK9 1371 aa24.84■■□□□ 1.57
CISH-202ENST00000443053 KIF21BO75037 1637 aa24.82■■□□□ 1.56
CISH-202ENST00000443053 GOLGA3Q08378 1498 aa24.8■■□□□ 1.56
CISH-202ENST00000443053 EIF4G3O43432 1585 aaKnown RBP24.8■■□□□ 1.56
CISH-202ENST00000443053 ERICH3Q5RHP9 1530 aa24.78■■□□□ 1.56
CISH-202ENST00000443053 PBRM1Q86U86 1689 aa24.77■■□□□ 1.56
CISH-202ENST00000443053 GRIN2BQ13224 1484 aa24.76■■□□□ 1.55
CISH-202ENST00000443053 CUL7Q14999 1698 aa24.7■■□□□ 1.55
CISH-202ENST00000443053 TNIKQ9UKE5 1360 aa24.68■■□□□ 1.54
CISH-202ENST00000443053 SNAPC4Q5SXM2 1469 aa24.67■■□□□ 1.54
CISH-202ENST00000443053 RANGAP1P46060 587 aaPredicted RBP24.64■■□□□ 1.53
CISH-202ENST00000443053 FHAD1B1AJZ9 1412 aa24.64■■□□□ 1.53
CISH-202ENST00000443053 ADAMTS12P58397 1594 aa24.61■■□□□ 1.53
CISH-202ENST00000443053 FBLN2P98095 1184 aa24.59■■□□□ 1.53
CISH-202ENST00000443053 MAGI1Q96QZ7 1491 aaPredicted RBP24.57■■□□□ 1.52
CISH-202ENST00000443053 CHMP7Q8WUX9 453 aaPredicted RBP24.56■■□□□ 1.52
CISH-202ENST00000443053 CEP162Q5TB80 1403 aa24.54■■□□□ 1.52
CISH-202ENST00000443053 SYNJ2O15056 1496 aa24.5■■□□□ 1.51
CISH-202ENST00000443053 GRIN2AQ12879 1464 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms