RNA–Protein interactions for RNA: ENST00000599567.5

NUP62-217, Transcript of nucleoporin 62, humanhuman

TSL 4

Gene NUP62, Length 579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP62-217ENST00000599567 NISCHQ9Y2I1 1504 aa24.01■■□□□ 1.43
NUP62-217ENST00000599567 ABCC9O60706 1549 aa22.62■■□□□ 1.21
NUP62-217ENST00000599567 DNAJC5BQ9UF47 199 aa21.9■■□□□ 1.1
NUP62-217ENST00000599567 CCDC180Q9P1Z9 1646 aa21.87■■□□□ 1.09
NUP62-217ENST00000599567 RB1CC1Q8TDY2 1594 aa21.18■□□□□ 0.98
NUP62-217ENST00000599567 PABPN1Q86U42 306 aaKnown RBP eCLIP20.97■□□□□ 0.95
NUP62-217ENST00000599567 NACADO15069 1562 aa20.84■□□□□ 0.93
NUP62-217ENST00000599567 UNC13AQ9UPW8 1703 aa20.76■□□□□ 0.91
NUP62-217ENST00000599567 DCAF8L2P0C7V8 631 aa20.67■□□□□ 0.9
NUP62-217ENST00000599567 DNAJC5Q9H3Z4 198 aa20.62■□□□□ 0.89
NUP62-217ENST00000599567 BICRAQ9NZM4 1560 aa20.61■□□□□ 0.89
NUP62-217ENST00000599567 CECR2Q9BXF3 1484 aa20.44■□□□□ 0.86
NUP62-217ENST00000599567 CC2D2AQ9P2K1 1620 aa20.39■□□□□ 0.86
NUP62-217ENST00000599567 MYO15BQ96JP2 1530 aa20.27■□□□□ 0.83
NUP62-217ENST00000599567 SHROOM4Q9ULL8 1493 aa20.18■□□□□ 0.82
NUP62-217ENST00000599567 EIF4G1Q04637 1599 aaKnown RBP20.15■□□□□ 0.82
NUP62-217ENST00000599567 SCRIBQ14160 1630 aa19.91■□□□□ 0.78
NUP62-217ENST00000599567 CUX2O14529 1486 aa19.75■□□□□ 0.75
NUP62-217ENST00000599567 DCAF1Q9Y4B6 1507 aa19.75■□□□□ 0.75
NUP62-217ENST00000599567 ZCCHC6Q5VYS8 1495 aaKnown RBP19.72■□□□□ 0.75
NUP62-217ENST00000599567 ERCC6Q03468 1493 aa19.57■□□□□ 0.72
NUP62-217ENST00000599567 TRIM41Q8WV44 630 aa19.46■□□□□ 0.71
NUP62-217ENST00000599567 NCAPD3P42695 1498 aa19.25■□□□□ 0.67
NUP62-217ENST00000599567 NESP48681 1621 aa19.23■□□□□ 0.67
NUP62-217ENST00000599567 THOC2Q8NI27 1593 aaKnown RBP19.16■□□□□ 0.66
NUP62-217ENST00000599567 ATAD2BQ9ULI0 1458 aa19.09■□□□□ 0.65
NUP62-217ENST00000599567 HMGXB3Q12766 1538 aa19.03■□□□□ 0.64
NUP62-217ENST00000599567 SMARCA2P51531 1590 aa19.02■□□□□ 0.63
NUP62-217ENST00000599567 KIF21AQ7Z4S6 1674 aa18.98■□□□□ 0.63
NUP62-217ENST00000599567 LAMC3Q9Y6N6 1575 aa18.94■□□□□ 0.62
NUP62-217ENST00000599567 SMARCA4P51532 1647 aa18.9■□□□□ 0.62
NUP62-217ENST00000599567 BAZ1BQ9UIG0 1483 aaKnown RBP18.87■□□□□ 0.61
NUP62-217ENST00000599567 PDS5BQ9NTI5 1447 aa18.85■□□□□ 0.61
NUP62-217ENST00000599567 BAZ1AQ9NRL2 1556 aaPredicted RBP18.82■□□□□ 0.6
NUP62-217ENST00000599567 OSCARQ8IYS5 282 aa18.76■□□□□ 0.59
NUP62-217ENST00000599567 MRC2Q9UBG0 1479 aa18.73■□□□□ 0.59
NUP62-217ENST00000599567 WDR62O43379 1518 aa18.71■□□□□ 0.59
NUP62-217ENST00000599567 PEG3Q9GZU2 1588 aa18.69■□□□□ 0.58
NUP62-217ENST00000599567 CADPSQ9ULU8 1353 aa18.63■□□□□ 0.57
NUP62-217ENST00000599567 RIMBP3CA6NJZ7 1639 aa18.62■□□□□ 0.57
NUP62-217ENST00000599567 RIMBP3BA6NNM3 1639 aa18.62■□□□□ 0.57
NUP62-217ENST00000599567 RIMBP3Q9UFD9 1639 aa18.62■□□□□ 0.57
NUP62-217ENST00000599567 CEP164Q9UPV0 1460 aa18.52■□□□□ 0.55
NUP62-217ENST00000599567 MROH2BQ7Z745 1585 aa18.51■□□□□ 0.55
NUP62-217ENST00000599567 ARHGEF11O15085 1522 aa18.46■□□□□ 0.55
NUP62-217ENST00000599567 TRHP20396 242 aaPredicted RBP18.45■□□□□ 0.54
NUP62-217ENST00000599567 AEBP2Q6ZN18 517 aaPredicted RBP18.45■□□□□ 0.54
NUP62-217ENST00000599567 FANCD2Q9BXW9 1451 aa18.44■□□□□ 0.54
NUP62-217ENST00000599567 CYB5RLQ6IPT4 315 aa18.41■□□□□ 0.54
NUP62-217ENST00000599567 URB2Q14146 1524 aaKnown RBP18.33■□□□□ 0.53
NUP62-217ENST00000599567 WIZO95785 1651 aa18.28■□□□□ 0.52
NUP62-217ENST00000599567 CFTRP13569 1480 aa18.26■□□□□ 0.51
NUP62-217ENST00000599567 ZNF608Q9ULD9 1512 aaPredicted RBP18.24■□□□□ 0.51
NUP62-217ENST00000599567 ARAP1Q96P48 1450 aa18.22■□□□□ 0.51
NUP62-217ENST00000599567 IFT140Q96RY7 1462 aa18.16■□□□□ 0.5
NUP62-217ENST00000599567 CHD1O14646 1710 aa18.14■□□□□ 0.49
NUP62-217ENST00000599567 EIF4G3O43432 1585 aaKnown RBP18.1■□□□□ 0.49
NUP62-217ENST00000599567 RSF1Q96T23 1441 aaPredicted RBP18.07■□□□□ 0.48
NUP62-217ENST00000599567 PRDM2Q13029 1718 aa18.06■□□□□ 0.48
NUP62-217ENST00000599567 FBLN2P98095 1184 aa18.05■□□□□ 0.48
NUP62-217ENST00000599567 TOPBP1Q92547 1522 aa18■□□□□ 0.47
NUP62-217ENST00000599567 AQRO60306 1485 aaKnown RBP eCLIP18■□□□□ 0.471e-7■■■□□ 18.3
NUP62-217ENST00000599567 TOP2AP11388 1531 aaKnown RBP17.95■□□□□ 0.46
NUP62-217ENST00000599567 TARBP1Q13395 1621 aaKnown RBP17.91■□□□□ 0.46
NUP62-217ENST00000599567 ABCC8Q09428 1581 aa17.89■□□□□ 0.45
NUP62-217ENST00000599567 DNMBPQ6XZF7 1577 aa17.87■□□□□ 0.45
NUP62-217ENST00000599567 CLASP1Q7Z460 1538 aa17.86■□□□□ 0.45
NUP62-217ENST00000599567 SYNJ1O43426 1573 aa17.79■□□□□ 0.44
NUP62-217ENST00000599567 CCDC88BA6NC98 1476 aa17.78■□□□□ 0.44
NUP62-217ENST00000599567 POLA1P09884 1462 aaPredicted RBP17.77■□□□□ 0.44
NUP62-217ENST00000599567 TDRD9Q8NDG6 1382 aaKnown RBP17.77■□□□□ 0.43
NUP62-217ENST00000599567 SNAPC4Q5SXM2 1469 aa17.76■□□□□ 0.43
NUP62-217ENST00000599567 ILDR1Q86SU0 546 aaPredicted RBP17.76■□□□□ 0.43
NUP62-217ENST00000599567 CHMP7Q8WUX9 453 aaPredicted RBP17.76■□□□□ 0.43
NUP62-217ENST00000599567 GAPVD1Q14C86 1478 aa17.75■□□□□ 0.43
NUP62-217ENST00000599567 RAD54L2Q9Y4B4 1467 aa17.75■□□□□ 0.43
NUP62-217ENST00000599567 SOGA1O94964 1423 aa17.69■□□□□ 0.42
NUP62-217ENST00000599567 MAGI1Q96QZ7 1491 aaPredicted RBP17.67■□□□□ 0.42
NUP62-217ENST00000599567 SYNJ2O15056 1496 aa17.63■□□□□ 0.41
NUP62-217ENST00000599567 WDR97A6NE52 1622 aa17.63■□□□□ 0.41
NUP62-217ENST00000599567 GRIN2BQ13224 1484 aa17.6■□□□□ 0.41
NUP62-217ENST00000599567 KIF13AQ9H1H9 1805 aa17.6■□□□□ 0.41
NUP62-217ENST00000599567 ERCC6L2Q5T890 1561 aa17.57■□□□□ 0.4
NUP62-217ENST00000599567 FGD5Q6ZNL6 1462 aa17.56■□□□□ 0.4
NUP62-217ENST00000599567 PBRM1Q86U86 1689 aa17.52■□□□□ 0.4
NUP62-217ENST00000599567 KDM4FA0A1W2PPD8 638 aa17.52■□□□□ 0.4
NUP62-217ENST00000599567 CEP170Q5SW79 1584 aa17.45■□□□□ 0.38
NUP62-217ENST00000599567 CUX1P39880 1505 aa17.43■□□□□ 0.38
NUP62-217ENST00000599567 FAM69CQ0P6D2 419 aa17.4■□□□□ 0.38
NUP62-217ENST00000599567 GRIN2AQ12879 1464 aa17.38■□□□□ 0.37
NUP62-217ENST00000599567 SHROOM2Q13796 1616 aa17.36■□□□□ 0.37
NUP62-217ENST00000599567 KDM6BO15054 1643 aa17.36■□□□□ 0.37
NUP62-217ENST00000599567 ABCA5Q8WWZ7 1642 aa17.36■□□□□ 0.37
NUP62-217ENST00000599567 ABCC10Q5T3U5 1492 aa17.35■□□□□ 0.37
NUP62-217ENST00000599567 NUP160Q12769 1436 aa17.33■□□□□ 0.36
NUP62-217ENST00000599567 ABCA10Q8WWZ4 1543 aa17.3■□□□□ 0.36
NUP62-217ENST00000599567 DIP2BQ9P265 1576 aa17.29■□□□□ 0.36
NUP62-217ENST00000599567 TSPOAP1O95153 1857 aa17.29■□□□□ 0.36
NUP62-217ENST00000599567 NPM1P06748 294 aaKnown RBP eCLIP17.28■□□□□ 0.36
NUP62-217ENST00000599567 ADAMTS12P58397 1594 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms