RNA–Protein interactions for RNA: ENST00000441669.6

TRIT1-203, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRIT1, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-203ENST00000441669 NISCHQ9Y2I1 1504 aa23.24■■□□□ 1.31
TRIT1-203ENST00000441669 CCDC180Q9P1Z9 1646 aa20.94■□□□□ 0.94
TRIT1-203ENST00000441669 ABCC9O60706 1549 aa20.84■□□□□ 0.93
TRIT1-203ENST00000441669 RB1CC1Q8TDY2 1594 aa19.9■□□□□ 0.78
TRIT1-203ENST00000441669 NACADO15069 1562 aa19.75■□□□□ 0.75
TRIT1-203ENST00000441669 DCAF8L2P0C7V8 631 aa19.58■□□□□ 0.73
TRIT1-203ENST00000441669 MYO15BQ96JP2 1530 aa19.47■□□□□ 0.71
TRIT1-203ENST00000441669 UNC13AQ9UPW8 1703 aa19.45■□□□□ 0.7
TRIT1-203ENST00000441669 DNAJC5BQ9UF47 199 aa19.42■□□□□ 0.7
TRIT1-203ENST00000441669 PABPN1Q86U42 306 aaKnown RBP eCLIP19.35■□□□□ 0.69
TRIT1-203ENST00000441669 ZCCHC6Q5VYS8 1495 aaKnown RBP19.27■□□□□ 0.68
TRIT1-203ENST00000441669 BICRAQ9NZM4 1560 aa19.26■□□□□ 0.67
TRIT1-203ENST00000441669 DCAF1Q9Y4B6 1507 aa19.22■□□□□ 0.67
TRIT1-203ENST00000441669 SHROOM4Q9ULL8 1493 aa19.07■□□□□ 0.64
TRIT1-203ENST00000441669 SCRIBQ14160 1630 aa19.04■□□□□ 0.64
TRIT1-203ENST00000441669 CC2D2AQ9P2K1 1620 aa18.85■□□□□ 0.61
TRIT1-203ENST00000441669 EIF4G1Q04637 1599 aaKnown RBP18.81■□□□□ 0.6
TRIT1-203ENST00000441669 CECR2Q9BXF3 1484 aa18.78■□□□□ 0.6
TRIT1-203ENST00000441669 NCAPD3P42695 1498 aa18.18■□□□□ 0.5
TRIT1-203ENST00000441669 SMARCA4P51532 1647 aa18.16■□□□□ 0.5
TRIT1-203ENST00000441669 SMARCA2P51531 1590 aa18.14■□□□□ 0.49
TRIT1-203ENST00000441669 ATAD2BQ9ULI0 1458 aa18.13■□□□□ 0.49
TRIT1-203ENST00000441669 HMGXB3Q12766 1538 aa18.1■□□□□ 0.49
TRIT1-203ENST00000441669 BAZ1AQ9NRL2 1556 aaPredicted RBP18.08■□□□□ 0.49
TRIT1-203ENST00000441669 ERCC6Q03468 1493 aa18.04■□□□□ 0.48
TRIT1-203ENST00000441669 BAZ1BQ9UIG0 1483 aaKnown RBP18■□□□□ 0.47
TRIT1-203ENST00000441669 CUX2O14529 1486 aa17.99■□□□□ 0.47
TRIT1-203ENST00000441669 PEG3Q9GZU2 1588 aa17.97■□□□□ 0.47
TRIT1-203ENST00000441669 MROH2BQ7Z745 1585 aa17.89■□□□□ 0.45
TRIT1-203ENST00000441669 NESP48681 1621 aa17.88■□□□□ 0.45
TRIT1-203ENST00000441669 DNAJC5Q9H3Z4 198 aa17.88■□□□□ 0.45
TRIT1-203ENST00000441669 LAMC3Q9Y6N6 1575 aa17.83■□□□□ 0.44
TRIT1-203ENST00000441669 THOC2Q8NI27 1593 aaKnown RBP17.76■□□□□ 0.43
TRIT1-203ENST00000441669 KIF21AQ7Z4S6 1674 aa17.73■□□□□ 0.43
TRIT1-203ENST00000441669 WIZO95785 1651 aa17.71■□□□□ 0.43
TRIT1-203ENST00000441669 PDS5BQ9NTI5 1447 aa17.71■□□□□ 0.42
TRIT1-203ENST00000441669 CADPSQ9ULU8 1353 aa17.62■□□□□ 0.41
TRIT1-203ENST00000441669 MRC2Q9UBG0 1479 aa17.55■□□□□ 0.4
TRIT1-203ENST00000441669 WDR62O43379 1518 aa17.51■□□□□ 0.39
TRIT1-203ENST00000441669 RSF1Q96T23 1441 aaPredicted RBP17.51■□□□□ 0.39
TRIT1-203ENST00000441669 TOP2AP11388 1531 aaKnown RBP17.5■□□□□ 0.39
TRIT1-203ENST00000441669 CEP164Q9UPV0 1460 aa17.5■□□□□ 0.39
TRIT1-203ENST00000441669 FANCD2Q9BXW9 1451 aa17.46■□□□□ 0.39
TRIT1-203ENST00000441669 CFTRP13569 1480 aa17.43■□□□□ 0.38
TRIT1-203ENST00000441669 PRDM2Q13029 1718 aa17.39■□□□□ 0.37
TRIT1-203ENST00000441669 URB2Q14146 1524 aaKnown RBP17.29■□□□□ 0.36
TRIT1-203ENST00000441669 CCDC88BA6NC98 1476 aa17.26■□□□□ 0.35
TRIT1-203ENST00000441669 TRIM41Q8WV44 630 aa17.14■□□□□ 0.33
TRIT1-203ENST00000441669 IFT140Q96RY7 1462 aa17.13■□□□□ 0.33
TRIT1-203ENST00000441669 TOPBP1Q92547 1522 aa17.12■□□□□ 0.33
TRIT1-203ENST00000441669 ABCC8Q09428 1581 aa17.12■□□□□ 0.33
TRIT1-203ENST00000441669 OSCARQ8IYS5 282 aa17.12■□□□□ 0.33
TRIT1-203ENST00000441669 DNMBPQ6XZF7 1577 aa17.09■□□□□ 0.33
TRIT1-203ENST00000441669 ZNF608Q9ULD9 1512 aaPredicted RBP17.06■□□□□ 0.32
TRIT1-203ENST00000441669 EIF4G3O43432 1585 aaKnown RBP17.04■□□□□ 0.32
TRIT1-203ENST00000441669 TARBP1Q13395 1621 aaKnown RBP16.98■□□□□ 0.31
TRIT1-203ENST00000441669 RIMBP3CA6NJZ7 1639 aa16.95■□□□□ 0.3
TRIT1-203ENST00000441669 RIMBP3BA6NNM3 1639 aa16.95■□□□□ 0.3
TRIT1-203ENST00000441669 RIMBP3Q9UFD9 1639 aa16.95■□□□□ 0.3
TRIT1-203ENST00000441669 POLA1P09884 1462 aaPredicted RBP16.94■□□□□ 0.3
TRIT1-203ENST00000441669 CHD1O14646 1710 aa16.93■□□□□ 0.3
TRIT1-203ENST00000441669 AQRO60306 1485 aaKnown RBP eCLIP16.91■□□□□ 0.35e-7■■■■□ 26.4
TRIT1-203ENST00000441669 ARHGEF11O15085 1522 aa16.88■□□□□ 0.29
TRIT1-203ENST00000441669 WDR97A6NE52 1622 aa16.87■□□□□ 0.29
TRIT1-203ENST00000441669 RAD54L2Q9Y4B4 1467 aa16.86■□□□□ 0.29
TRIT1-203ENST00000441669 SOGA1O94964 1423 aa16.85■□□□□ 0.29
TRIT1-203ENST00000441669 FGD5Q6ZNL6 1462 aa16.85■□□□□ 0.29
TRIT1-203ENST00000441669 CUX1P39880 1505 aa16.82■□□□□ 0.28
TRIT1-203ENST00000441669 FBLN2P98095 1184 aa16.82■□□□□ 0.28
TRIT1-203ENST00000441669 TDRD9Q8NDG6 1382 aaKnown RBP16.8■□□□□ 0.28
TRIT1-203ENST00000441669 SNAPC4Q5SXM2 1469 aa16.78■□□□□ 0.28
TRIT1-203ENST00000441669 MAGI1Q96QZ7 1491 aaPredicted RBP16.75■□□□□ 0.27
TRIT1-203ENST00000441669 SUPT5HO00267 1087 aaKnown RBP16.74■□□□□ 0.27
TRIT1-203ENST00000441669 GRIN2BQ13224 1484 aa16.73■□□□□ 0.27
TRIT1-203ENST00000441669 PBRM1Q86U86 1689 aa16.73■□□□□ 0.27
TRIT1-203ENST00000441669 SYNJ1O43426 1573 aa16.72■□□□□ 0.27
TRIT1-203ENST00000441669 CYB5RLQ6IPT4 315 aa16.7■□□□□ 0.26
TRIT1-203ENST00000441669 CHMP7Q8WUX9 453 aaPredicted RBP16.69■□□□□ 0.26
TRIT1-203ENST00000441669 ARAP1Q96P48 1450 aa16.69■□□□□ 0.26
TRIT1-203ENST00000441669 CLASP1Q7Z460 1538 aa16.69■□□□□ 0.26
TRIT1-203ENST00000441669 SYNJ2O15056 1496 aa16.68■□□□□ 0.26
TRIT1-203ENST00000441669 GAPVD1Q14C86 1478 aa16.67■□□□□ 0.26
TRIT1-203ENST00000441669 ABCA5Q8WWZ7 1642 aa16.66■□□□□ 0.26
TRIT1-203ENST00000441669 ABCA10Q8WWZ4 1543 aa16.66■□□□□ 0.26
TRIT1-203ENST00000441669 BIVM-ERCC5R4GMW8 1640 aa16.61■□□□□ 0.25
TRIT1-203ENST00000441669 WRNQ14191 1432 aaPredicted RBP eCLIP16.6■□□□□ 0.251e-6■■■■■ 58.5
TRIT1-203ENST00000441669 TOP2BQ02880 1626 aa16.59■□□□□ 0.25
TRIT1-203ENST00000441669 TRHP20396 242 aaPredicted RBP16.55■□□□□ 0.24
TRIT1-203ENST00000441669 ADAMTS12P58397 1594 aa16.54■□□□□ 0.24
TRIT1-203ENST00000441669 GRIN2AQ12879 1464 aa16.52■□□□□ 0.24
TRIT1-203ENST00000441669 ERICH3Q5RHP9 1530 aa16.47■□□□□ 0.23
TRIT1-203ENST00000441669 CEP170Q5SW79 1584 aa16.46■□□□□ 0.23
TRIT1-203ENST00000441669 FHAD1B1AJZ9 1412 aa16.46■□□□□ 0.23
TRIT1-203ENST00000441669 NUP160Q12769 1436 aa16.44■□□□□ 0.22
TRIT1-203ENST00000441669 SHROOM2Q13796 1616 aa16.41■□□□□ 0.22
TRIT1-203ENST00000441669 ERCC6L2Q5T890 1561 aa16.39■□□□□ 0.21
TRIT1-203ENST00000441669 RUSC2Q8N2Y8 1516 aa16.31■□□□□ 0.2
TRIT1-203ENST00000441669 PRG4Q92954 1404 aaPredicted RBP16.29■□□□□ 0.2
TRIT1-203ENST00000441669 CUL7Q14999 1698 aa16.28■□□□□ 0.2
TRIT1-203ENST00000441669 KIF27Q86VH2 1401 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 199.6 ms