RNA–Protein interactions for RNA: ENST00000596217.1

NUP62-208, Transcript of nucleoporin 62, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NUP62, Length 3,590 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP62-208ENST00000596217 NISCHQ9Y2I1 1504 aa23.55■■□□□ 1.36
NUP62-208ENST00000596217 DCAF8L2P0C7V8 631 aa21.81■■□□□ 1.08
NUP62-208ENST00000596217 HRCP23327 699 aa20.98■□□□□ 0.95
NUP62-208ENST00000596217 SHROOM4Q9ULL8 1493 aa20.9■□□□□ 0.94
NUP62-208ENST00000596217 PPARGC1BQ86YN6 1023 aaKnown RBP20.63■□□□□ 0.89
NUP62-208ENST00000596217 PELP1Q8IZL8 1130 aaKnown RBP20.61■□□□□ 0.89
NUP62-208ENST00000596217 PCGF6Q9BYE7 350 aa20.61■□□□□ 0.89
NUP62-208ENST00000596217 SUPT5HO00267 1087 aaKnown RBP20.51■□□□□ 0.87
NUP62-208ENST00000596217 ABCC9O60706 1549 aa20.31■□□□□ 0.84
NUP62-208ENST00000596217 MYO15BQ96JP2 1530 aa20.1■□□□□ 0.81
NUP62-208ENST00000596217 CHIC1Q5VXU3 224 aa20.04■□□□□ 0.8
NUP62-208ENST00000596217 SCAF1Q9H7N4 1312 aaKnown RBP19.97■□□□□ 0.79
NUP62-208ENST00000596217 MYT1Q01538 1121 aa19.87■□□□□ 0.77
NUP62-208ENST00000596217 CCDC180Q9P1Z9 1646 aa19.8■□□□□ 0.76
NUP62-208ENST00000596217 TRIM26Q12899 539 aaPredicted RBP19.78■□□□□ 0.76
NUP62-208ENST00000596217 DCAF1Q9Y4B6 1507 aa19.71■□□□□ 0.75
NUP62-208ENST00000596217 LOC105371045A0A1W2PR82 267 aa19.71■□□□□ 0.75
NUP62-208ENST00000596217 ZEB1P37275 1124 aaPredicted RBP19.7■□□□□ 0.74
NUP62-208ENST00000596217 PABPN1Q86U42 306 aaKnown RBP eCLIP19.7■□□□□ 0.74
NUP62-208ENST00000596217 ZCCHC6Q5VYS8 1495 aaKnown RBP19.59■□□□□ 0.73
NUP62-208ENST00000596217 ACIN1Q9UKV3 1341 aaKnown RBP19.46■□□□□ 0.71
NUP62-208ENST00000596217 NEUROD1Q13562 356 aa19.4■□□□□ 0.7
NUP62-208ENST00000596217 GTF3C3Q9Y5Q9 886 aa19.38■□□□□ 0.69
NUP62-208ENST00000596217 EHMT2Q96KQ7 1210 aa19.35■□□□□ 0.69
NUP62-208ENST00000596217 CENPBP07199 599 aaPredicted RBP19.31■□□□□ 0.68
NUP62-208ENST00000596217 SCRIBQ14160 1630 aa19.31■□□□□ 0.68
NUP62-208ENST00000596217 FAM9AQ8IZU1 332 aaPredicted RBP19.08■□□□□ 0.65
NUP62-208ENST00000596217 DIEXFQ68CQ4 756 aaKnown RBP19.08■□□□□ 0.64
NUP62-208ENST00000596217 CCER1Q8TC90 406 aaPredicted RBP19.04■□□□□ 0.64
NUP62-208ENST00000596217 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.01■□□□□ 0.63
NUP62-208ENST00000596217 RB1CC1Q8TDY2 1594 aa18.96■□□□□ 0.63
NUP62-208ENST00000596217 YTHDC1Q96MU7 727 aaKnown RBP18.96■□□□□ 0.63
NUP62-208ENST00000596217 NACADO15069 1562 aa18.91■□□□□ 0.62
NUP62-208ENST00000596217 TRIM41Q8WV44 630 aa18.88■□□□□ 0.61
NUP62-208ENST00000596217 CECR2Q9BXF3 1484 aa18.71■□□□□ 0.59
NUP62-208ENST00000596217 TTBK1Q5TCY1 1321 aaPredicted RBP18.66■□□□□ 0.58
NUP62-208ENST00000596217 RANGAP1P46060 587 aaPredicted RBP18.64■□□□□ 0.57
NUP62-208ENST00000596217 ZNF316A6NFI3 1004 aaPredicted RBP18.61■□□□□ 0.57
NUP62-208ENST00000596217 BCL11AQ9H165 835 aa18.59■□□□□ 0.57
NUP62-208ENST00000596217 RSF1Q96T23 1441 aaPredicted RBP18.57■□□□□ 0.56
NUP62-208ENST00000596217 MIER1Q8N108 512 aa18.52■□□□□ 0.56
NUP62-208ENST00000596217 ANP32EQ9BTT0 268 aa18.46■□□□□ 0.55
NUP62-208ENST00000596217 MROH2BQ7Z745 1585 aa18.4■□□□□ 0.54
NUP62-208ENST00000596217 SUPT16HQ9Y5B9 1047 aaKnown RBP18.32■□□□□ 0.52
NUP62-208ENST00000596217 UBTFP17480 764 aaKnown RBP18.31■□□□□ 0.52
NUP62-208ENST00000596217 CSRNP3Q8WYN3 585 aa18.28■□□□□ 0.52
NUP62-208ENST00000596217 TSHZ2Q9NRE2 1034 aa18.28■□□□□ 0.52
NUP62-208ENST00000596217 CLSPNQ9HAW4 1339 aa18.22■□□□□ 0.51
NUP62-208ENST00000596217 BAZ1AQ9NRL2 1556 aaPredicted RBP18.22■□□□□ 0.51
NUP62-208ENST00000596217 WIZO95785 1651 aa18.16■□□□□ 0.5
NUP62-208ENST00000596217 BAZ1BQ9UIG0 1483 aaKnown RBP18.16■□□□□ 0.5
NUP62-208ENST00000596217 HNRNPUL2Q1KMD3 747 aaKnown RBP18.15■□□□□ 0.5
NUP62-208ENST00000596217 BCANQ96GW7 911 aa18.11■□□□□ 0.49
NUP62-208ENST00000596217 ATP1B4Q9UN42 357 aaPredicted RBP18.09■□□□□ 0.49
NUP62-208ENST00000596217 BICRAQ9NZM4 1560 aa18.03■□□□□ 0.48
NUP62-208ENST00000596217 DNAJC5BQ9UF47 199 aa18.02■□□□□ 0.48
NUP62-208ENST00000596217 SMARCA4P51532 1647 aa17.98■□□□□ 0.47
NUP62-208ENST00000596217 CCDC88BA6NC98 1476 aa17.97■□□□□ 0.47
NUP62-208ENST00000596217 CEP162Q5TB80 1403 aa17.97■□□□□ 0.47
NUP62-208ENST00000596217 ATAD2BQ9ULI0 1458 aa17.97■□□□□ 0.47
NUP62-208ENST00000596217 WRNQ14191 1432 aaPredicted RBP eCLIP17.97■□□□□ 0.47
NUP62-208ENST00000596217 APLP2Q06481 763 aa17.93■□□□□ 0.46
NUP62-208ENST00000596217 UNC13AQ9UPW8 1703 aa17.92■□□□□ 0.46
NUP62-208ENST00000596217 PRKCSHP14314 528 aaPredicted RBP17.91■□□□□ 0.46
NUP62-208ENST00000596217 FKBP8Q14318 412 aa17.91■□□□□ 0.46
NUP62-208ENST00000596217 FBLN2P98095 1184 aa17.9■□□□□ 0.46
NUP62-208ENST00000596217 RBM19Q9Y4C8 960 aaKnown RBP17.88■□□□□ 0.45
NUP62-208ENST00000596217 EIF4G1Q04637 1599 aaKnown RBP17.87■□□□□ 0.45
NUP62-208ENST00000596217 ERICH6Q7L0X2 663 aa17.86■□□□□ 0.45
NUP62-208ENST00000596217 NEFLP07196 543 aa17.85■□□□□ 0.45
NUP62-208ENST00000596217 SMARCA2P51531 1590 aa17.82■□□□□ 0.44
NUP62-208ENST00000596217 ABCC8Q09428 1581 aa17.8■□□□□ 0.44
NUP62-208ENST00000596217 ITGAEP38570 1179 aa17.78■□□□□ 0.44
NUP62-208ENST00000596217 TNIKQ9UKE5 1360 aa17.77■□□□□ 0.44
NUP62-208ENST00000596217 TOP2AP11388 1531 aaKnown RBP17.77■□□□□ 0.44
NUP62-208ENST00000596217 P3H3Q8IVL6 736 aa17.76■□□□□ 0.43
NUP62-208ENST00000596217 KCNH8Q96L42 1107 aa17.75■□□□□ 0.43
NUP62-208ENST00000596217 ARID3CA6NKF2 412 aa17.66■□□□□ 0.42
NUP62-208ENST00000596217 CC2D2AQ9P2K1 1620 aa17.66■□□□□ 0.42
NUP62-208ENST00000596217 MSH5O43196 834 aa17.66■□□□□ 0.42
NUP62-208ENST00000596217 SOGA1O94964 1423 aa17.66■□□□□ 0.42
NUP62-208ENST00000596217 NCAPD3P42695 1498 aa17.62■□□□□ 0.41
NUP62-208ENST00000596217 CADPSQ9ULU8 1353 aa17.61■□□□□ 0.41
NUP62-208ENST00000596217 ERCC6Q03468 1493 aa17.59■□□□□ 0.41
NUP62-208ENST00000596217 TRIM52Q96A61 297 aa17.58■□□□□ 0.4
NUP62-208ENST00000596217 NESP48681 1621 aa17.57■□□□□ 0.4
NUP62-208ENST00000596217 DHX57Q6P158 1386 aaKnown RBP17.55■□□□□ 0.4
NUP62-208ENST00000596217 CDK11AQ9UQ88 783 aaPredicted RBP17.54■□□□□ 0.4
NUP62-208ENST00000596217 GOLGA3Q08378 1498 aa17.54■□□□□ 0.4
NUP62-208ENST00000596217 DEKP35659 375 aaKnown RBP17.53■□□□□ 0.4
NUP62-208ENST00000596217 DDX10Q13206 875 aaKnown RBP17.53■□□□□ 0.4
NUP62-208ENST00000596217 RUSC2Q8N2Y8 1516 aa17.5■□□□□ 0.39
NUP62-208ENST00000596217 MYT1LQ9UL68 1186 aa17.49■□□□□ 0.39
NUP62-208ENST00000596217 FANCIQ9NVI1 1328 aa17.48■□□□□ 0.39
NUP62-208ENST00000596217 CLIP1P30622 1438 aa17.48■□□□□ 0.39
NUP62-208ENST00000596217 EEA1Q15075 1411 aa17.48■□□□□ 0.39
NUP62-208ENST00000596217 TDRD9Q8NDG6 1382 aaKnown RBP17.48■□□□□ 0.39
NUP62-208ENST00000596217 ANO8Q9HCE9 1232 aaPredicted RBP17.44■□□□□ 0.38
NUP62-208ENST00000596217 IRX6P78412 446 aaPredicted RBP17.44■□□□□ 0.38
NUP62-208ENST00000596217 FANCD2Q9BXW9 1451 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms