RNA–Protein interactions for RNA: ENST00000372818.5

TRIT1-202, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRIT1, Length 2,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-202ENST00000372818 NISCHQ9Y2I1 1504 aa30.16■■■□□ 2.42
TRIT1-202ENST00000372818 CCDC180Q9P1Z9 1646 aa26.1■■□□□ 1.77
TRIT1-202ENST00000372818 ZCCHC6Q5VYS8 1495 aaKnown RBP25.38■■□□□ 1.65
TRIT1-202ENST00000372818 DCAF1Q9Y4B6 1507 aa24.91■■□□□ 1.58
TRIT1-202ENST00000372818 DCAF8L2P0C7V8 631 aa24.88■■□□□ 1.57
TRIT1-202ENST00000372818 SHROOM4Q9ULL8 1493 aa24.86■■□□□ 1.57
TRIT1-202ENST00000372818 ABCC9O60706 1549 aa24.54■■□□□ 1.52
TRIT1-202ENST00000372818 MYO15BQ96JP2 1530 aa24.5■■□□□ 1.51
TRIT1-202ENST00000372818 NACADO15069 1562 aa24.28■■□□□ 1.48
TRIT1-202ENST00000372818 SCRIBQ14160 1630 aa24.11■■□□□ 1.45
TRIT1-202ENST00000372818 SUPT5HO00267 1087 aaKnown RBP24.05■■□□□ 1.44
TRIT1-202ENST00000372818 RB1CC1Q8TDY2 1594 aa24■■□□□ 1.43
TRIT1-202ENST00000372818 RSF1Q96T23 1441 aaPredicted RBP23.53■■□□□ 1.36
TRIT1-202ENST00000372818 UNC13AQ9UPW8 1703 aa23.52■■□□□ 1.36
TRIT1-202ENST00000372818 CECR2Q9BXF3 1484 aa23.46■■□□□ 1.35
TRIT1-202ENST00000372818 MROH2BQ7Z745 1585 aa23.33■■□□□ 1.33
TRIT1-202ENST00000372818 BICRAQ9NZM4 1560 aa23.32■■□□□ 1.32
TRIT1-202ENST00000372818 BAZ1AQ9NRL2 1556 aaPredicted RBP23.25■■□□□ 1.31
TRIT1-202ENST00000372818 PABPN1Q86U42 306 aaKnown RBP eCLIP23.23■■□□□ 1.31
TRIT1-202ENST00000372818 CHIC1Q5VXU3 224 aa23.16■■□□□ 1.3
TRIT1-202ENST00000372818 WIZO95785 1651 aa23.14■■□□□ 1.29
TRIT1-202ENST00000372818 SMARCA4P51532 1647 aa23.11■■□□□ 1.29
TRIT1-202ENST00000372818 TOP2AP11388 1531 aaKnown RBP22.89■■□□□ 1.25
TRIT1-202ENST00000372818 PEG3Q9GZU2 1588 aa22.81■■□□□ 1.24
TRIT1-202ENST00000372818 SMARCA2P51531 1590 aa22.7■■□□□ 1.22
TRIT1-202ENST00000372818 CCDC88BA6NC98 1476 aa22.7■■□□□ 1.22
TRIT1-202ENST00000372818 ATAD2BQ9ULI0 1458 aa22.69■■□□□ 1.22
TRIT1-202ENST00000372818 EIF4G1Q04637 1599 aaKnown RBP22.62■■□□□ 1.21
TRIT1-202ENST00000372818 TRIM41Q8WV44 630 aa22.57■■□□□ 1.2
TRIT1-202ENST00000372818 HRCP23327 699 aa22.57■■□□□ 1.2
TRIT1-202ENST00000372818 BAZ1BQ9UIG0 1483 aaKnown RBP22.56■■□□□ 1.2
TRIT1-202ENST00000372818 NCAPD3P42695 1498 aa22.44■■□□□ 1.18
TRIT1-202ENST00000372818 HMGXB3Q12766 1538 aa22.4■■□□□ 1.18
TRIT1-202ENST00000372818 LOC105371045A0A1W2PR82 267 aa22.31■■□□□ 1.16
TRIT1-202ENST00000372818 ABCC8Q09428 1581 aa22.3■■□□□ 1.16
TRIT1-202ENST00000372818 PCGF6Q9BYE7 350 aa22.22■■□□□ 1.15
TRIT1-202ENST00000372818 FAM9AQ8IZU1 332 aaPredicted RBP22.2■■□□□ 1.14
TRIT1-202ENST00000372818 CC2D2AQ9P2K1 1620 aa22.18■■□□□ 1.14
TRIT1-202ENST00000372818 WRNQ14191 1432 aaPredicted RBP eCLIP22.13■■□□□ 1.131e-6■■■■■ 58.5
TRIT1-202ENST00000372818 CFTRP13569 1480 aa22.03■■□□□ 1.12
TRIT1-202ENST00000372818 SYNJ1O43426 1573 aa22.02■■□□□ 1.12
TRIT1-202ENST00000372818 SOGA1O94964 1423 aa21.97■■□□□ 1.11
TRIT1-202ENST00000372818 PPARGC1BQ86YN6 1023 aaKnown RBP21.95■■□□□ 1.1
TRIT1-202ENST00000372818 EEA1Q15075 1411 aa21.93■■□□□ 1.1
TRIT1-202ENST00000372818 CADPSQ9ULU8 1353 aa21.9■■□□□ 1.1
TRIT1-202ENST00000372818 EHMT2Q96KQ7 1210 aa21.89■■□□□ 1.1
TRIT1-202ENST00000372818 TOP2BQ02880 1626 aa21.89■■□□□ 1.09
TRIT1-202ENST00000372818 RUSC2Q8N2Y8 1516 aa21.87■■□□□ 1.09
TRIT1-202ENST00000372818 BIVM-ERCC5R4GMW8 1640 aa21.85■■□□□ 1.09
TRIT1-202ENST00000372818 PRDM2Q13029 1718 aa21.84■■□□□ 1.09
TRIT1-202ENST00000372818 CSRNP3Q8WYN3 585 aa21.82■■□□□ 1.08
TRIT1-202ENST00000372818 CUX1P39880 1505 aa21.79■■□□□ 1.08
TRIT1-202ENST00000372818 TRIM26Q12899 539 aaPredicted RBP21.77■■□□□ 1.08
TRIT1-202ENST00000372818 GOLGA3Q08378 1498 aa21.65■■□□□ 1.06
TRIT1-202ENST00000372818 FANCD2Q9BXW9 1451 aa21.65■■□□□ 1.06
TRIT1-202ENST00000372818 TNIKQ9UKE5 1360 aa21.65■■□□□ 1.06
TRIT1-202ENST00000372818 DNAJC5BQ9UF47 199 aa21.64■■□□□ 1.05
TRIT1-202ENST00000372818 NESP48681 1621 aa21.64■■□□□ 1.05
TRIT1-202ENST00000372818 CEP164Q9UPV0 1460 aa21.62■■□□□ 1.05
TRIT1-202ENST00000372818 KIF21BO75037 1637 aa21.62■■□□□ 1.05
TRIT1-202ENST00000372818 LAMC3Q9Y6N6 1575 aa21.6■■□□□ 1.05
TRIT1-202ENST00000372818 UBTFP17480 764 aaKnown RBP21.57■■□□□ 1.04
TRIT1-202ENST00000372818 CEP162Q5TB80 1403 aa21.56■■□□□ 1.04
TRIT1-202ENST00000372818 KIF27Q86VH2 1401 aa21.53■■□□□ 1.04
TRIT1-202ENST00000372818 FGD5Q6ZNL6 1462 aa21.5■■□□□ 1.03
TRIT1-202ENST00000372818 ZEB1P37275 1124 aaPredicted RBP21.5■■□□□ 1.03
TRIT1-202ENST00000372818 RAPGEF2Q9Y4G8 1499 aa21.5■■□□□ 1.03
TRIT1-202ENST00000372818 DNMBPQ6XZF7 1577 aa21.48■■□□□ 1.03
TRIT1-202ENST00000372818 PRXQ9BXM0 1461 aa21.47■■□□□ 1.03
TRIT1-202ENST00000372818 PDS5BQ9NTI5 1447 aa21.45■■□□□ 1.02
TRIT1-202ENST00000372818 TOPBP1Q92547 1522 aa21.44■■□□□ 1.02
TRIT1-202ENST00000372818 ERICH3Q5RHP9 1530 aa21.43■■□□□ 1.02
TRIT1-202ENST00000372818 CUX2O14529 1486 aa21.43■■□□□ 1.02
TRIT1-202ENST00000372818 POLA1P09884 1462 aaPredicted RBP21.37■■□□□ 1.01
TRIT1-202ENST00000372818 URB2Q14146 1524 aaKnown RBP21.37■■□□□ 1.01
TRIT1-202ENST00000372818 IGF1RP08069 1367 aa21.35■■□□□ 1.01
TRIT1-202ENST00000372818 CLIP1P30622 1438 aa21.33■■□□□ 1.01
TRIT1-202ENST00000372818 RAD54L2Q9Y4B4 1467 aa21.32■■□□□ 1
TRIT1-202ENST00000372818 KIF21AQ7Z4S6 1674 aa21.32■■□□□ 1
TRIT1-202ENST00000372818 ABCA10Q8WWZ4 1543 aa21.31■■□□□ 1
TRIT1-202ENST00000372818 CARMIL1Q5VZK9 1371 aa21.23■□□□□ 0.99
TRIT1-202ENST00000372818 WDR97A6NE52 1622 aa21.18■□□□□ 0.98
TRIT1-202ENST00000372818 VPS8Q8N3P4 1428 aa21.18■□□□□ 0.98
TRIT1-202ENST00000372818 RANGAP1P46060 587 aaPredicted RBP21.17■□□□□ 0.98
TRIT1-202ENST00000372818 MRC2Q9UBG0 1479 aa21.16■□□□□ 0.98
TRIT1-202ENST00000372818 PELP1Q8IZL8 1130 aaKnown RBP21.13■□□□□ 0.97
TRIT1-202ENST00000372818 TDRD9Q8NDG6 1382 aaKnown RBP21.1■□□□□ 0.97
TRIT1-202ENST00000372818 ABCA5Q8WWZ7 1642 aa21.1■□□□□ 0.97
TRIT1-202ENST00000372818 TARBP1Q13395 1621 aaKnown RBP21.09■□□□□ 0.97
TRIT1-202ENST00000372818 ARAP1Q96P48 1450 aa21.09■□□□□ 0.97
TRIT1-202ENST00000372818 CUL7Q14999 1698 aa21.08■□□□□ 0.97
TRIT1-202ENST00000372818 GAPVD1Q14C86 1478 aa21.07■□□□□ 0.96
TRIT1-202ENST00000372818 ARHGAP35Q9NRY4 1499 aa21.04■□□□□ 0.96
TRIT1-202ENST00000372818 WDR62O43379 1518 aa21.02■□□□□ 0.96
TRIT1-202ENST00000372818 TTBK1Q5TCY1 1321 aaPredicted RBP21.02■□□□□ 0.96
TRIT1-202ENST00000372818 SCAF1Q9H7N4 1312 aaKnown RBP21.02■□□□□ 0.96
TRIT1-202ENST00000372818 ERCC6Q03468 1493 aa20.99■□□□□ 0.95
TRIT1-202ENST00000372818 APLP2Q06481 763 aa20.96■□□□□ 0.95
TRIT1-202ENST00000372818 IFT140Q96RY7 1462 aa20.94■□□□□ 0.94
TRIT1-202ENST00000372818 AQRO60306 1485 aaKnown RBP eCLIP20.92■□□□□ 0.945e-7■■■■□ 26.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms