RNA–Protein interactions for RNA: ENST00000557157.5

HNRNPC-229, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-229ENST00000557157 AEBP2Q6ZN18 517 aaPredicted RBP17.28■□□□□ 0.36
HNRNPC-229ENST00000557157 CHIC1Q5VXU3 224 aa16.42■□□□□ 0.22
HNRNPC-229ENST00000557157 SENP3Q9H4L4 574 aaPredicted RBP14.87□□□□□ -0.03
HNRNPC-229ENST00000557157 PHF23Q9BUL5 403 aaPredicted RBP14.61□□□□□ -0.07
HNRNPC-229ENST00000557157 FOXD1Q16676 465 aa13.78□□□□□ -0.2
HNRNPC-229ENST00000557157 PLPPR3Q6T4P5 718 aa13.15□□□□□ -0.3
HNRNPC-229ENST00000557157 MSH5O43196 834 aa13.03□□□□□ -0.32
HNRNPC-229ENST00000557157 PIAS4Q8N2W9 510 aaPredicted RBP12.91□□□□□ -0.34
HNRNPC-229ENST00000557157 PPP6R1Q9UPN7 881 aa12.8□□□□□ -0.36
HNRNPC-229ENST00000557157 ADRA2BP18089 450 aa12.77□□□□□ -0.37
HNRNPC-229ENST00000557157 POTEDQ86YR6 584 aa12.73□□□□□ -0.37
HNRNPC-229ENST00000557157 SCAF1Q9H7N4 1312 aaKnown RBP11.83□□□□□ -0.52
HNRNPC-229ENST00000557157 DMRT2Q9Y5R5 561 aa11.75□□□□□ -0.53
HNRNPC-229ENST00000557157 MAPK8IP2Q13387 824 aaPredicted RBP11.73□□□□□ -0.53
HNRNPC-229ENST00000557157 PPP4R3CPQ6ZMV5 832 aa11.47□□□□□ -0.57
HNRNPC-229ENST00000557157 HOXD11P31277 338 aaPredicted RBP11.3□□□□□ -0.6
HNRNPC-229ENST00000557157 CNKSR2Q8WXI2 1034 aa11.3□□□□□ -0.6
HNRNPC-229ENST00000557157 DCAF8L1A6NGE4 600 aa11.27□□□□□ -0.61
HNRNPC-229ENST00000557157 RNF216Q9NWF9 866 aaPredicted RBP11.22□□□□□ -0.61
HNRNPC-229ENST00000557157 CACNB1Q02641 598 aaPredicted RBP11.18□□□□□ -0.62
HNRNPC-229ENST00000557157 NCBP3Q53F19 620 aaKnown RBP11.08□□□□□ -0.64
HNRNPC-229ENST00000557157 RNF39Q9H2S5 420 aa11.06□□□□□ -0.64
HNRNPC-229ENST00000557157 DNAJC5BQ9UF47 199 aa10.99□□□□□ -0.65
HNRNPC-229ENST00000557157 C1QBPQ07021 282 aaKnown RBP10.94□□□□□ -0.66
HNRNPC-229ENST00000557157 NPM3O75607 178 aaKnown RBP10.83□□□□□ -0.68
HNRNPC-229ENST00000557157 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.78□□□□□ -0.682e-26■■□□□ 12.2
HNRNPC-229ENST00000557157 KCNA4P22459 653 aa10.54□□□□□ -0.72
HNRNPC-229ENST00000557157 U3KPZ7 1027 aaPredicted RBP10.5□□□□□ -0.73
HNRNPC-229ENST00000557157 CAPN15O75808 1086 aa10.39□□□□□ -0.75
HNRNPC-229ENST00000557157 APLP2Q06481 763 aa10.35□□□□□ -0.75
HNRNPC-229ENST00000557157 SPINK5Q9NQ38 1064 aaPredicted RBP10.34□□□□□ -0.75
HNRNPC-229ENST00000557157 SLC4A2P04920 1241 aa10.33□□□□□ -0.76
HNRNPC-229ENST00000557157 DSG3P32926 999 aa10.32□□□□□ -0.76
HNRNPC-229ENST00000557157 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.31□□□□□ -0.76
HNRNPC-229ENST00000557157 HNRNPUL2Q1KMD3 747 aaKnown RBP10.31□□□□□ -0.76
HNRNPC-229ENST00000557157 ZNF219Q9P2Y4 722 aaPredicted RBP10.24□□□□□ -0.77
HNRNPC-229ENST00000557157 SAMD1Q6SPF0 538 aaPredicted RBP10.22□□□□□ -0.77
HNRNPC-229ENST00000557157 TRHP20396 242 aaPredicted RBP10.19□□□□□ -0.78
HNRNPC-229ENST00000557157 ABCB7O75027 752 aa10.1□□□□□ -0.79
HNRNPC-229ENST00000557157 MYCNP04198 464 aaPredicted RBP10.08□□□□□ -0.8
HNRNPC-229ENST00000557157 DNAJC5Q9H3Z4 198 aa10.01□□□□□ -0.81
HNRNPC-229ENST00000557157 POTEHQ6S545 545 aa10□□□□□ -0.81
HNRNPC-229ENST00000557157 SLC4A1APQ9BWU0 796 aaKnown RBP9.99□□□□□ -0.81
HNRNPC-229ENST00000557157 RBM42Q9BTD8 480 aaKnown RBP9.95□□□□□ -0.82
HNRNPC-229ENST00000557157 FOXD4L1Q9NU39 408 aa9.93□□□□□ -0.82
HNRNPC-229ENST00000557157 POLA2Q14181 598 aa9.9□□□□□ -0.82
HNRNPC-229ENST00000557157 ZBTB12Q9Y330 459 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-229ENST00000557157 ATF5Q9Y2D1 282 aaPredicted RBP9.74□□□□□ -0.85
HNRNPC-229ENST00000557157 CHRDL2Q6WN34 429 aa9.68□□□□□ -0.86
HNRNPC-229ENST00000557157 ATXN8OSP0DMR3 200 aa9.66□□□□□ -0.86
HNRNPC-229ENST00000557157 AKT1S1Q96B36 256 aa9.66□□□□□ -0.86
HNRNPC-229ENST00000557157 ZBTB22O15209 634 aa9.65□□□□□ -0.86
HNRNPC-229ENST00000557157 ABCC9O60706 1549 aa9.62□□□□□ -0.87
HNRNPC-229ENST00000557157 OSCARQ8IYS5 282 aa9.59□□□□□ -0.87
HNRNPC-229ENST00000557157 REM2Q8IYK8 340 aaPredicted RBP9.53□□□□□ -0.88
HNRNPC-229ENST00000557157 FBLN2P98095 1184 aa9.5□□□□□ -0.89
HNRNPC-229ENST00000557157 SPDYE2BA6NHP3 402 aa9.44□□□□□ -0.9
HNRNPC-229ENST00000557157 SPDYE6P0CI01 402 aa9.44□□□□□ -0.9
HNRNPC-229ENST00000557157 SPDYE2Q495Y8 402 aa9.44□□□□□ -0.9
HNRNPC-229ENST00000557157 PITPNM1O00562 1244 aa9.41□□□□□ -0.9
HNRNPC-229ENST00000557157 PIP4P2Q8N4L2 257 aa9.41□□□□□ -0.9
HNRNPC-229ENST00000557157 FXR2P51116 673 aaKnown RBP eCLIP9.36□□□□□ -0.914e-14■■■■□ 21.2
HNRNPC-229ENST00000557157 SP7Q8TDD2 431 aaPredicted RBP9.35□□□□□ -0.91
HNRNPC-229ENST00000557157 MKRN4PQ13434 485 aaPredicted RBP9.3□□□□□ -0.92
HNRNPC-229ENST00000557157 SPDYE1Q8NFV5 336 aaPredicted RBP9.3□□□□□ -0.92
HNRNPC-229ENST00000557157 HAX1O00165 279 aa9.29□□□□□ -0.92
HNRNPC-229ENST00000557157 ZNF692Q9BU19 519 aaPredicted RBP9.29□□□□□ -0.92
HNRNPC-229ENST00000557157 SSUH2Q9Y2M2 353 aa9.28□□□□□ -0.92
HNRNPC-229ENST00000557157 CLEC11AQ9Y240 323 aa9.25□□□□□ -0.93
HNRNPC-229ENST00000557157 PRKAR2AP13861 404 aaKnown RBP9.19□□□□□ -0.94
HNRNPC-229ENST00000557157 CSRNP3Q8WYN3 585 aa9.18□□□□□ -0.94
HNRNPC-229ENST00000557157 PABPN1Q86U42 306 aaKnown RBP eCLIP9.14□□□□□ -0.95
HNRNPC-229ENST00000557157 TRIM41Q8WV44 630 aa9.13□□□□□ -0.95
HNRNPC-229ENST00000557157 PRR29P0C7W0 189 aa9.11□□□□□ -0.95
HNRNPC-229ENST00000557157 C19orf67A6NJJ6 358 aa9.07□□□□□ -0.96
HNRNPC-229ENST00000557157 EVX2Q03828 476 aa9.07□□□□□ -0.96
HNRNPC-229ENST00000557157 EHMT2Q96KQ7 1210 aa9.05□□□□□ -0.96
HNRNPC-229ENST00000557157 CHADLQ6NUI6 762 aa9.03□□□□□ -0.96
HNRNPC-229ENST00000557157 STAG3Q9UJ98 1225 aa8.96□□□□□ -0.98
HNRNPC-229ENST00000557157 GABBR2O75899 941 aa8.94□□□□□ -0.98
HNRNPC-229ENST00000557157 FARP1Q9Y4F1 1045 aaPredicted RBP8.94□□□□□ -0.98
HNRNPC-229ENST00000557157 NISCHQ9Y2I1 1504 aa8.9□□□□□ -0.98
HNRNPC-229ENST00000557157 SPDYE4A6NLX3 237 aa8.9□□□□□ -0.98
HNRNPC-229ENST00000557157 CD44P16070 742 aaKnown RBP8.9□□□□□ -0.98
HNRNPC-229ENST00000557157 CLCN6P51797 869 aa8.9□□□□□ -0.98
HNRNPC-229ENST00000557157 ILDR1Q86SU0 546 aaPredicted RBP8.84□□□□□ -0.99
HNRNPC-229ENST00000557157 CREBZFQ9NS37 354 aa8.81□□□□□ -1
HNRNPC-229ENST00000557157 ZNF579Q8NAF0 562 aaKnown RBP8.77□□□□□ -1.01
HNRNPC-229ENST00000557157 PAK3O75914 559 aaPredicted RBP8.76□□□□□ -1.01
HNRNPC-229ENST00000557157 LHX8Q68G74 356 aa8.76□□□□□ -1.01
HNRNPC-229ENST00000557157 ZRANB1Q9UGI0 708 aa8.76□□□□□ -1.01
HNRNPC-229ENST00000557157 NPM1P06748 294 aaKnown RBP eCLIP8.75□□□□□ -1.01
HNRNPC-229ENST00000557157 DCBLD2Q96PD2 775 aa8.74□□□□□ -1.01
HNRNPC-229ENST00000557157 CECR2Q9BXF3 1484 aa8.73□□□□□ -1.01
HNRNPC-229ENST00000557157 POTEIP0CG38 1075 aa8.7□□□□□ -1.02
HNRNPC-229ENST00000557157 PROM2Q8N271 834 aa8.66□□□□□ -1.02
HNRNPC-229ENST00000557157 MNX1P50219 401 aaPredicted RBP8.64□□□□□ -1.03
HNRNPC-229ENST00000557157 CUX2O14529 1486 aa8.64□□□□□ -1.03
HNRNPC-229ENST00000557157 GALR2O43603 387 aaPredicted RBP8.62□□□□□ -1.03
HNRNPC-229ENST00000557157 PLEKHG5O94827 1062 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms