RNA–Protein interactions for RNA: ENST00000541099.5

TRIT1-215, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRIT1, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-215ENST00000541099 NISCHQ9Y2I1 1504 aa28.39■■■□□ 2.14
TRIT1-215ENST00000541099 CCDC180Q9P1Z9 1646 aa25.07■■□□□ 1.6
TRIT1-215ENST00000541099 ABCC9O60706 1549 aa24.56■■□□□ 1.52
TRIT1-215ENST00000541099 ZCCHC6Q5VYS8 1495 aaKnown RBP23.68■■□□□ 1.38
TRIT1-215ENST00000541099 DCAF8L2P0C7V8 631 aa23.64■■□□□ 1.37
TRIT1-215ENST00000541099 NACADO15069 1562 aa23.58■■□□□ 1.37
TRIT1-215ENST00000541099 RB1CC1Q8TDY2 1594 aa23.56■■□□□ 1.36
TRIT1-215ENST00000541099 AEBP2Q6ZN18 517 aaPredicted RBP23.54■■□□□ 1.36
TRIT1-215ENST00000541099 MYO15BQ96JP2 1530 aa23.49■■□□□ 1.35
TRIT1-215ENST00000541099 DCAF1Q9Y4B6 1507 aa23.45■■□□□ 1.34
TRIT1-215ENST00000541099 UNC13AQ9UPW8 1703 aa23.06■■□□□ 1.28
TRIT1-215ENST00000541099 PABPN1Q86U42 306 aaKnown RBP eCLIP23.02■■□□□ 1.28
TRIT1-215ENST00000541099 BICRAQ9NZM4 1560 aa22.97■■□□□ 1.27
TRIT1-215ENST00000541099 SCRIBQ14160 1630 aa22.97■■□□□ 1.27
TRIT1-215ENST00000541099 CHIC1Q5VXU3 224 aa22.89■■□□□ 1.25
TRIT1-215ENST00000541099 SHROOM4Q9ULL8 1493 aa22.59■■□□□ 1.21
TRIT1-215ENST00000541099 DNAJC5BQ9UF47 199 aa22.57■■□□□ 1.2
TRIT1-215ENST00000541099 EIF4G1Q04637 1599 aaKnown RBP22.3■■□□□ 1.16
TRIT1-215ENST00000541099 CECR2Q9BXF3 1484 aa22.19■■□□□ 1.14
TRIT1-215ENST00000541099 CC2D2AQ9P2K1 1620 aa22.18■■□□□ 1.14
TRIT1-215ENST00000541099 SMARCA4P51532 1647 aa21.97■■□□□ 1.11
TRIT1-215ENST00000541099 MROH2BQ7Z745 1585 aa21.93■■□□□ 1.1
TRIT1-215ENST00000541099 BAZ1AQ9NRL2 1556 aaPredicted RBP21.92■■□□□ 1.1
TRIT1-215ENST00000541099 ATAD2BQ9ULI0 1458 aa21.88■■□□□ 1.09
TRIT1-215ENST00000541099 NCAPD3P42695 1498 aa21.83■■□□□ 1.08
TRIT1-215ENST00000541099 PEG3Q9GZU2 1588 aa21.76■■□□□ 1.07
TRIT1-215ENST00000541099 SMARCA2P51531 1590 aa21.75■■□□□ 1.07
TRIT1-215ENST00000541099 RSF1Q96T23 1441 aaPredicted RBP21.72■■□□□ 1.07
TRIT1-215ENST00000541099 HMGXB3Q12766 1538 aa21.68■■□□□ 1.06
TRIT1-215ENST00000541099 WIZO95785 1651 aa21.66■■□□□ 1.06
TRIT1-215ENST00000541099 BAZ1BQ9UIG0 1483 aaKnown RBP21.64■■□□□ 1.05
TRIT1-215ENST00000541099 TOP2AP11388 1531 aaKnown RBP21.4■■□□□ 1.02
TRIT1-215ENST00000541099 NESP48681 1621 aa21.33■■□□□ 1
TRIT1-215ENST00000541099 SUPT5HO00267 1087 aaKnown RBP21.23■□□□□ 0.99
TRIT1-215ENST00000541099 CCDC88BA6NC98 1476 aa21.21■□□□□ 0.99
TRIT1-215ENST00000541099 CADPSQ9ULU8 1353 aa21.2■□□□□ 0.98
TRIT1-215ENST00000541099 LAMC3Q9Y6N6 1575 aa21.15■□□□□ 0.98
TRIT1-215ENST00000541099 CFTRP13569 1480 aa21.1■□□□□ 0.97
TRIT1-215ENST00000541099 ERCC6Q03468 1493 aa21.06■□□□□ 0.96
TRIT1-215ENST00000541099 PDS5BQ9NTI5 1447 aa21.02■□□□□ 0.96
TRIT1-215ENST00000541099 KIF21AQ7Z4S6 1674 aa20.96■□□□□ 0.95
TRIT1-215ENST00000541099 FANCD2Q9BXW9 1451 aa20.94■□□□□ 0.94
TRIT1-215ENST00000541099 THOC2Q8NI27 1593 aaKnown RBP20.91■□□□□ 0.94
TRIT1-215ENST00000541099 CEP164Q9UPV0 1460 aa20.86■□□□□ 0.93
TRIT1-215ENST00000541099 MRC2Q9UBG0 1479 aa20.83■□□□□ 0.93
TRIT1-215ENST00000541099 CUX2O14529 1486 aa20.81■□□□□ 0.92
TRIT1-215ENST00000541099 PRDM2Q13029 1718 aa20.8■□□□□ 0.92
TRIT1-215ENST00000541099 WDR62O43379 1518 aa20.77■□□□□ 0.92
TRIT1-215ENST00000541099 URB2Q14146 1524 aaKnown RBP20.77■□□□□ 0.92
TRIT1-215ENST00000541099 TOPBP1Q92547 1522 aa20.63■□□□□ 0.89
TRIT1-215ENST00000541099 DNMBPQ6XZF7 1577 aa20.57■□□□□ 0.88
TRIT1-215ENST00000541099 CUX1P39880 1505 aa20.56■□□□□ 0.88
TRIT1-215ENST00000541099 ABCC8Q09428 1581 aa20.53■□□□□ 0.88
TRIT1-215ENST00000541099 POLA1P09884 1462 aaPredicted RBP20.47■□□□□ 0.87
TRIT1-215ENST00000541099 FGD5Q6ZNL6 1462 aa20.43■□□□□ 0.86
TRIT1-215ENST00000541099 IFT140Q96RY7 1462 aa20.43■□□□□ 0.86
TRIT1-215ENST00000541099 RAD54L2Q9Y4B4 1467 aa20.43■□□□□ 0.86
TRIT1-215ENST00000541099 ZNF608Q9ULD9 1512 aaPredicted RBP20.43■□□□□ 0.86
TRIT1-215ENST00000541099 WRNQ14191 1432 aaPredicted RBP eCLIP20.42■□□□□ 0.861e-6■■■■■ 58.5
TRIT1-215ENST00000541099 TARBP1Q13395 1621 aaKnown RBP20.39■□□□□ 0.86
TRIT1-215ENST00000541099 SYNJ1O43426 1573 aa20.39■□□□□ 0.85
TRIT1-215ENST00000541099 SOGA1O94964 1423 aa20.37■□□□□ 0.85
TRIT1-215ENST00000541099 TOP2BQ02880 1626 aa20.34■□□□□ 0.85
TRIT1-215ENST00000541099 BIVM-ERCC5R4GMW8 1640 aa20.31■□□□□ 0.84
TRIT1-215ENST00000541099 AQRO60306 1485 aaKnown RBP eCLIP20.3■□□□□ 0.845e-7■■■■□ 26.4
TRIT1-215ENST00000541099 TDRD9Q8NDG6 1382 aaKnown RBP20.28■□□□□ 0.84
TRIT1-215ENST00000541099 EIF4G3O43432 1585 aaKnown RBP20.25■□□□□ 0.83
TRIT1-215ENST00000541099 ABCA10Q8WWZ4 1543 aa20.23■□□□□ 0.83
TRIT1-215ENST00000541099 WDR97A6NE52 1622 aa20.22■□□□□ 0.83
TRIT1-215ENST00000541099 ABCA5Q8WWZ7 1642 aa20.13■□□□□ 0.81
TRIT1-215ENST00000541099 GAPVD1Q14C86 1478 aa20.12■□□□□ 0.81
TRIT1-215ENST00000541099 DNAJC5Q9H3Z4 198 aa20.11■□□□□ 0.81
TRIT1-215ENST00000541099 PHF23Q9BUL5 403 aaPredicted RBP20.1■□□□□ 0.81
TRIT1-215ENST00000541099 GRIN2BQ13224 1484 aa20.09■□□□□ 0.81
TRIT1-215ENST00000541099 SNAPC4Q5SXM2 1469 aa20.09■□□□□ 0.81
TRIT1-215ENST00000541099 SENP3Q9H4L4 574 aaPredicted RBP20.04■□□□□ 0.8
TRIT1-215ENST00000541099 PBRM1Q86U86 1689 aa20.01■□□□□ 0.79
TRIT1-215ENST00000541099 MAGI1Q96QZ7 1491 aaPredicted RBP20■□□□□ 0.79
TRIT1-215ENST00000541099 OSCARQ8IYS5 282 aa19.99■□□□□ 0.79
TRIT1-215ENST00000541099 TRIM41Q8WV44 630 aa19.99■□□□□ 0.79
TRIT1-215ENST00000541099 FBLN2P98095 1184 aa19.96■□□□□ 0.79
TRIT1-215ENST00000541099 IGF1RP08069 1367 aa19.95■□□□□ 0.79
TRIT1-215ENST00000541099 SYNJ2O15056 1496 aa19.95■□□□□ 0.78
TRIT1-215ENST00000541099 CHD1O14646 1710 aa19.95■□□□□ 0.78
TRIT1-215ENST00000541099 ERICH3Q5RHP9 1530 aa19.95■□□□□ 0.78
TRIT1-215ENST00000541099 RUSC2Q8N2Y8 1516 aa19.95■□□□□ 0.78
TRIT1-215ENST00000541099 KIF27Q86VH2 1401 aa19.94■□□□□ 0.78
TRIT1-215ENST00000541099 ADAMTS12P58397 1594 aa19.92■□□□□ 0.78
TRIT1-215ENST00000541099 CHMP7Q8WUX9 453 aaPredicted RBP19.92■□□□□ 0.78
TRIT1-215ENST00000541099 FHAD1B1AJZ9 1412 aa19.89■□□□□ 0.77
TRIT1-215ENST00000541099 GRIN2AQ12879 1464 aa19.85■□□□□ 0.77
TRIT1-215ENST00000541099 CLASP1Q7Z460 1538 aa19.81■□□□□ 0.76
TRIT1-215ENST00000541099 NUP160Q12769 1436 aa19.79■□□□□ 0.76
TRIT1-215ENST00000541099 CARMIL1Q5VZK9 1371 aa19.78■□□□□ 0.76
TRIT1-215ENST00000541099 CEP170Q5SW79 1584 aa19.78■□□□□ 0.76
TRIT1-215ENST00000541099 CUL7Q14999 1698 aa19.74■□□□□ 0.75
TRIT1-215ENST00000541099 ARHGEF11O15085 1522 aa19.7■□□□□ 0.74
TRIT1-215ENST00000541099 PRXQ9BXM0 1461 aa19.67■□□□□ 0.74
TRIT1-215ENST00000541099 RIMBP3CA6NJZ7 1639 aa19.67■□□□□ 0.74
TRIT1-215ENST00000541099 RIMBP3BA6NNM3 1639 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms