RNA–Protein interactions for RNA: ENST00000492612.6

TRIT1-212, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 5

Gene TRIT1, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-212ENST00000492612 NISCHQ9Y2I1 1504 aa30.63■■■□□ 2.49
TRIT1-212ENST00000492612 ABCC9O60706 1549 aa27.62■■■□□ 2.01
TRIT1-212ENST00000492612 CCDC180Q9P1Z9 1646 aa27.45■■□□□ 1.99
TRIT1-212ENST00000492612 RB1CC1Q8TDY2 1594 aa26.19■■□□□ 1.78
TRIT1-212ENST00000492612 DCAF8L2P0C7V8 631 aa26.04■■□□□ 1.76
TRIT1-212ENST00000492612 NACADO15069 1562 aa25.98■■□□□ 1.75
TRIT1-212ENST00000492612 DNAJC5BQ9UF47 199 aa25.93■■□□□ 1.74
TRIT1-212ENST00000492612 PABPN1Q86U42 306 aaKnown RBP eCLIP25.75■■□□□ 1.71
TRIT1-212ENST00000492612 UNC13AQ9UPW8 1703 aa25.6■■□□□ 1.69
TRIT1-212ENST00000492612 MYO15BQ96JP2 1530 aa25.53■■□□□ 1.68
TRIT1-212ENST00000492612 BICRAQ9NZM4 1560 aa25.44■■□□□ 1.66
TRIT1-212ENST00000492612 ZCCHC6Q5VYS8 1495 aaKnown RBP25.37■■□□□ 1.65
TRIT1-212ENST00000492612 DCAF1Q9Y4B6 1507 aa25.22■■□□□ 1.63
TRIT1-212ENST00000492612 SCRIBQ14160 1630 aa25.14■■□□□ 1.61
TRIT1-212ENST00000492612 SHROOM4Q9ULL8 1493 aa24.98■■□□□ 1.59
TRIT1-212ENST00000492612 CC2D2AQ9P2K1 1620 aa24.9■■□□□ 1.58
TRIT1-212ENST00000492612 CECR2Q9BXF3 1484 aa24.84■■□□□ 1.57
TRIT1-212ENST00000492612 EIF4G1Q04637 1599 aaKnown RBP24.82■■□□□ 1.56
TRIT1-212ENST00000492612 NCAPD3P42695 1498 aa23.99■■□□□ 1.43
TRIT1-212ENST00000492612 ATAD2BQ9ULI0 1458 aa23.95■■□□□ 1.42
TRIT1-212ENST00000492612 SMARCA4P51532 1647 aa23.92■■□□□ 1.42
TRIT1-212ENST00000492612 SMARCA2P51531 1590 aa23.85■■□□□ 1.41
TRIT1-212ENST00000492612 ERCC6Q03468 1493 aa23.83■■□□□ 1.41
TRIT1-212ENST00000492612 HMGXB3Q12766 1538 aa23.79■■□□□ 1.4
TRIT1-212ENST00000492612 BAZ1AQ9NRL2 1556 aaPredicted RBP23.78■■□□□ 1.4
TRIT1-212ENST00000492612 DNAJC5Q9H3Z4 198 aa23.77■■□□□ 1.4
TRIT1-212ENST00000492612 BAZ1BQ9UIG0 1483 aaKnown RBP23.73■■□□□ 1.39
TRIT1-212ENST00000492612 CUX2O14529 1486 aa23.72■■□□□ 1.39
TRIT1-212ENST00000492612 NESP48681 1621 aa23.72■■□□□ 1.39
TRIT1-212ENST00000492612 MROH2BQ7Z745 1585 aa23.65■■□□□ 1.38
TRIT1-212ENST00000492612 PEG3Q9GZU2 1588 aa23.61■■□□□ 1.37
TRIT1-212ENST00000492612 LAMC3Q9Y6N6 1575 aa23.45■■□□□ 1.34
TRIT1-212ENST00000492612 THOC2Q8NI27 1593 aaKnown RBP23.42■■□□□ 1.34
TRIT1-212ENST00000492612 WIZO95785 1651 aa23.38■■□□□ 1.33
TRIT1-212ENST00000492612 KIF21AQ7Z4S6 1674 aa23.37■■□□□ 1.33
TRIT1-212ENST00000492612 PDS5BQ9NTI5 1447 aa23.34■■□□□ 1.33
TRIT1-212ENST00000492612 CADPSQ9ULU8 1353 aa23.28■■□□□ 1.32
TRIT1-212ENST00000492612 MRC2Q9UBG0 1479 aa23.16■■□□□ 1.3
TRIT1-212ENST00000492612 RSF1Q96T23 1441 aaPredicted RBP23.13■■□□□ 1.29
TRIT1-212ENST00000492612 WDR62O43379 1518 aa23.08■■□□□ 1.28
TRIT1-212ENST00000492612 CEP164Q9UPV0 1460 aa23.07■■□□□ 1.28
TRIT1-212ENST00000492612 FANCD2Q9BXW9 1451 aa23.05■■□□□ 1.28
TRIT1-212ENST00000492612 TOP2AP11388 1531 aaKnown RBP23.03■■□□□ 1.28
TRIT1-212ENST00000492612 CFTRP13569 1480 aa22.99■■□□□ 1.27
TRIT1-212ENST00000492612 URB2Q14146 1524 aaKnown RBP22.87■■□□□ 1.25
TRIT1-212ENST00000492612 TRIM41Q8WV44 630 aa22.85■■□□□ 1.25
TRIT1-212ENST00000492612 CCDC88BA6NC98 1476 aa22.8■■□□□ 1.24
TRIT1-212ENST00000492612 PRDM2Q13029 1718 aa22.74■■□□□ 1.23
TRIT1-212ENST00000492612 OSCARQ8IYS5 282 aa22.68■■□□□ 1.22
TRIT1-212ENST00000492612 TOPBP1Q92547 1522 aa22.61■■□□□ 1.21
TRIT1-212ENST00000492612 ZNF608Q9ULD9 1512 aaPredicted RBP22.61■■□□□ 1.21
TRIT1-212ENST00000492612 IFT140Q96RY7 1462 aa22.59■■□□□ 1.21
TRIT1-212ENST00000492612 DNMBPQ6XZF7 1577 aa22.5■■□□□ 1.19
TRIT1-212ENST00000492612 ABCC8Q09428 1581 aa22.49■■□□□ 1.19
TRIT1-212ENST00000492612 EIF4G3O43432 1585 aaKnown RBP22.45■■□□□ 1.18
TRIT1-212ENST00000492612 AQRO60306 1485 aaKnown RBP eCLIP22.41■■□□□ 1.182e-7■■■■■ 29
TRIT1-212ENST00000492612 RIMBP3CA6NJZ7 1639 aa22.39■■□□□ 1.18
TRIT1-212ENST00000492612 RIMBP3BA6NNM3 1639 aa22.39■■□□□ 1.18
TRIT1-212ENST00000492612 RIMBP3Q9UFD9 1639 aa22.39■■□□□ 1.18
TRIT1-212ENST00000492612 TARBP1Q13395 1621 aaKnown RBP22.39■■□□□ 1.17
TRIT1-212ENST00000492612 POLA1P09884 1462 aaPredicted RBP22.37■■□□□ 1.17
TRIT1-212ENST00000492612 RAD54L2Q9Y4B4 1467 aa22.34■■□□□ 1.17
TRIT1-212ENST00000492612 FBLN2P98095 1184 aa22.33■■□□□ 1.17
TRIT1-212ENST00000492612 ARHGEF11O15085 1522 aa22.31■■□□□ 1.16
TRIT1-212ENST00000492612 CHD1O14646 1710 aa22.3■■□□□ 1.16
TRIT1-212ENST00000492612 SOGA1O94964 1423 aa22.29■■□□□ 1.16
TRIT1-212ENST00000492612 TDRD9Q8NDG6 1382 aaKnown RBP22.28■■□□□ 1.16
TRIT1-212ENST00000492612 FGD5Q6ZNL6 1462 aa22.25■■□□□ 1.15
TRIT1-212ENST00000492612 SUPT5HO00267 1087 aaKnown RBP22.22■■□□□ 1.15
TRIT1-212ENST00000492612 CUX1P39880 1505 aa22.21■■□□□ 1.15
TRIT1-212ENST00000492612 CYB5RLQ6IPT4 315 aa22.21■■□□□ 1.15
TRIT1-212ENST00000492612 SNAPC4Q5SXM2 1469 aa22.17■■□□□ 1.14
TRIT1-212ENST00000492612 ARAP1Q96P48 1450 aa22.1■■□□□ 1.13
TRIT1-212ENST00000492612 CHMP7Q8WUX9 453 aaPredicted RBP22.1■■□□□ 1.13
TRIT1-212ENST00000492612 WDR97A6NE52 1622 aa22.08■■□□□ 1.13
TRIT1-212ENST00000492612 GRIN2BQ13224 1484 aa22.07■■□□□ 1.12
TRIT1-212ENST00000492612 MAGI1Q96QZ7 1491 aaPredicted RBP22.04■■□□□ 1.12
TRIT1-212ENST00000492612 CLASP1Q7Z460 1538 aa22.01■■□□□ 1.11
TRIT1-212ENST00000492612 SYNJ1O43426 1573 aa22■■□□□ 1.11
TRIT1-212ENST00000492612 TRHP20396 242 aaPredicted RBP22■■□□□ 1.11
TRIT1-212ENST00000492612 GAPVD1Q14C86 1478 aa22■■□□□ 1.11
TRIT1-212ENST00000492612 PBRM1Q86U86 1689 aa21.99■■□□□ 1.11
TRIT1-212ENST00000492612 SYNJ2O15056 1496 aa21.99■■□□□ 1.11
TRIT1-212ENST00000492612 ABCA10Q8WWZ4 1543 aa21.95■■□□□ 1.1
TRIT1-212ENST00000492612 ABCA5Q8WWZ7 1642 aa21.92■■□□□ 1.1
TRIT1-212ENST00000492612 WRNQ14191 1432 aaPredicted RBP eCLIP21.87■■□□□ 1.091e-6■■■■■ 58.5
TRIT1-212ENST00000492612 TOP2BQ02880 1626 aa21.81■■□□□ 1.08
TRIT1-212ENST00000492612 BIVM-ERCC5R4GMW8 1640 aa21.81■■□□□ 1.08
TRIT1-212ENST00000492612 GRIN2AQ12879 1464 aa21.79■■□□□ 1.08
TRIT1-212ENST00000492612 ADAMTS12P58397 1594 aa21.78■■□□□ 1.08
TRIT1-212ENST00000492612 ERCC6L2Q5T890 1561 aa21.74■■□□□ 1.07
TRIT1-212ENST00000492612 CEP170Q5SW79 1584 aa21.73■■□□□ 1.07
TRIT1-212ENST00000492612 FHAD1B1AJZ9 1412 aa21.71■■□□□ 1.07
TRIT1-212ENST00000492612 NUP160Q12769 1436 aa21.7■■□□□ 1.06
TRIT1-212ENST00000492612 ERICH3Q5RHP9 1530 aa21.65■■□□□ 1.06
TRIT1-212ENST00000492612 SHROOM2Q13796 1616 aa21.58■■□□□ 1.05
TRIT1-212ENST00000492612 PRG4Q92954 1404 aaPredicted RBP21.54■■□□□ 1.04
TRIT1-212ENST00000492612 JPH4Q96JJ6 628 aa21.52■■□□□ 1.04
TRIT1-212ENST00000492612 RUSC2Q8N2Y8 1516 aa21.46■■□□□ 1.03
TRIT1-212ENST00000492612 KIF27Q86VH2 1401 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms