RNA–Protein interactions for RNA: ENST00000599788.1

NUP62-218, Transcript of nucleoporin 62, humanhuman

TSL 4

Gene NUP62, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP62-218ENST00000599788 NISCHQ9Y2I1 1504 aa26.6■■□□□ 1.85
NUP62-218ENST00000599788 ABCC9O60706 1549 aa24.08■■□□□ 1.45
NUP62-218ENST00000599788 CCDC180Q9P1Z9 1646 aa23.95■■□□□ 1.42
NUP62-218ENST00000599788 RB1CC1Q8TDY2 1594 aa22.84■■□□□ 1.25
NUP62-218ENST00000599788 DNAJC5BQ9UF47 199 aa22.78■■□□□ 1.24
NUP62-218ENST00000599788 NACADO15069 1562 aa22.67■■□□□ 1.22
NUP62-218ENST00000599788 DCAF8L2P0C7V8 631 aa22.39■■□□□ 1.17
NUP62-218ENST00000599788 UNC13AQ9UPW8 1703 aa22.38■■□□□ 1.17
NUP62-218ENST00000599788 PABPN1Q86U42 306 aaKnown RBP eCLIP22.37■■□□□ 1.17
NUP62-218ENST00000599788 MYO15BQ96JP2 1530 aa22.33■■□□□ 1.17
NUP62-218ENST00000599788 BICRAQ9NZM4 1560 aa22.25■■□□□ 1.15
NUP62-218ENST00000599788 ZCCHC6Q5VYS8 1495 aaKnown RBP22.03■■□□□ 1.12
NUP62-218ENST00000599788 DCAF1Q9Y4B6 1507 aa21.98■■□□□ 1.11
NUP62-218ENST00000599788 SHROOM4Q9ULL8 1493 aa21.9■■□□□ 1.1
NUP62-218ENST00000599788 SCRIBQ14160 1630 aa21.79■■□□□ 1.08
NUP62-218ENST00000599788 CC2D2AQ9P2K1 1620 aa21.77■■□□□ 1.07
NUP62-218ENST00000599788 CECR2Q9BXF3 1484 aa21.71■■□□□ 1.07
NUP62-218ENST00000599788 EIF4G1Q04637 1599 aaKnown RBP21.69■■□□□ 1.06
NUP62-218ENST00000599788 DNAJC5Q9H3Z4 198 aa20.99■□□□□ 0.95
NUP62-218ENST00000599788 NCAPD3P42695 1498 aa20.94■□□□□ 0.94
NUP62-218ENST00000599788 ATAD2BQ9ULI0 1458 aa20.86■□□□□ 0.93
NUP62-218ENST00000599788 CUX2O14529 1486 aa20.83■□□□□ 0.93
NUP62-218ENST00000599788 SMARCA4P51532 1647 aa20.79■□□□□ 0.92
NUP62-218ENST00000599788 HMGXB3Q12766 1538 aa20.78■□□□□ 0.92
NUP62-218ENST00000599788 SMARCA2P51531 1590 aa20.76■□□□□ 0.91
NUP62-218ENST00000599788 ERCC6Q03468 1493 aa20.75■□□□□ 0.91
NUP62-218ENST00000599788 NESP48681 1621 aa20.67■□□□□ 0.9
NUP62-218ENST00000599788 BAZ1AQ9NRL2 1556 aaPredicted RBP20.64■□□□□ 0.9
NUP62-218ENST00000599788 PEG3Q9GZU2 1588 aa20.62■□□□□ 0.89
NUP62-218ENST00000599788 BAZ1BQ9UIG0 1483 aaKnown RBP20.61■□□□□ 0.89
NUP62-218ENST00000599788 THOC2Q8NI27 1593 aaKnown RBP20.52■□□□□ 0.88
NUP62-218ENST00000599788 MROH2BQ7Z745 1585 aa20.51■□□□□ 0.87
NUP62-218ENST00000599788 LAMC3Q9Y6N6 1575 aa20.48■□□□□ 0.87
NUP62-218ENST00000599788 KIF21AQ7Z4S6 1674 aa20.38■□□□□ 0.85
NUP62-218ENST00000599788 PDS5BQ9NTI5 1447 aa20.33■□□□□ 0.84
NUP62-218ENST00000599788 CADPSQ9ULU8 1353 aa20.27■□□□□ 0.84
NUP62-218ENST00000599788 WIZO95785 1651 aa20.24■□□□□ 0.83
NUP62-218ENST00000599788 MRC2Q9UBG0 1479 aa20.2■□□□□ 0.82
NUP62-218ENST00000599788 WDR62O43379 1518 aa20.19■□□□□ 0.82
NUP62-218ENST00000599788 CEP164Q9UPV0 1460 aa20.06■□□□□ 0.8
NUP62-218ENST00000599788 FANCD2Q9BXW9 1451 aa20.05■□□□□ 0.8
NUP62-218ENST00000599788 CFTRP13569 1480 aa20.03■□□□□ 0.8
NUP62-218ENST00000599788 RSF1Q96T23 1441 aaPredicted RBP20.01■□□□□ 0.79
NUP62-218ENST00000599788 TOP2AP11388 1531 aaKnown RBP19.97■□□□□ 0.79
NUP62-218ENST00000599788 TRIM41Q8WV44 630 aa19.94■□□□□ 0.78
NUP62-218ENST00000599788 URB2Q14146 1524 aaKnown RBP19.92■□□□□ 0.78
NUP62-218ENST00000599788 PRDM2Q13029 1718 aa19.81■□□□□ 0.76
NUP62-218ENST00000599788 OSCARQ8IYS5 282 aa19.79■□□□□ 0.76
NUP62-218ENST00000599788 CCDC88BA6NC98 1476 aa19.74■□□□□ 0.75
NUP62-218ENST00000599788 ZNF608Q9ULD9 1512 aaPredicted RBP19.7■□□□□ 0.74
NUP62-218ENST00000599788 IFT140Q96RY7 1462 aa19.68■□□□□ 0.74
NUP62-218ENST00000599788 TOPBP1Q92547 1522 aa19.66■□□□□ 0.74
NUP62-218ENST00000599788 RIMBP3CA6NJZ7 1639 aa19.62■□□□□ 0.73
NUP62-218ENST00000599788 RIMBP3BA6NNM3 1639 aa19.62■□□□□ 0.73
NUP62-218ENST00000599788 RIMBP3Q9UFD9 1639 aa19.62■□□□□ 0.73
NUP62-218ENST00000599788 EIF4G3O43432 1585 aaKnown RBP19.57■□□□□ 0.72
NUP62-218ENST00000599788 ABCC8Q09428 1581 aa19.57■□□□□ 0.72
NUP62-218ENST00000599788 DNMBPQ6XZF7 1577 aa19.57■□□□□ 0.72
NUP62-218ENST00000599788 ARHGEF11O15085 1522 aa19.54■□□□□ 0.72
NUP62-218ENST00000599788 TARBP1Q13395 1621 aaKnown RBP19.52■□□□□ 0.72
NUP62-218ENST00000599788 AQRO60306 1485 aaKnown RBP eCLIP19.48■□□□□ 0.711e-7■■■□□ 18.3
NUP62-218ENST00000599788 POLA1P09884 1462 aaPredicted RBP19.46■□□□□ 0.71
NUP62-218ENST00000599788 CHD1O14646 1710 aa19.45■□□□□ 0.7
NUP62-218ENST00000599788 RAD54L2Q9Y4B4 1467 aa19.38■□□□□ 0.69
NUP62-218ENST00000599788 ARAP1Q96P48 1450 aa19.36■□□□□ 0.69
NUP62-218ENST00000599788 CYB5RLQ6IPT4 315 aa19.34■□□□□ 0.69
NUP62-218ENST00000599788 SOGA1O94964 1423 aa19.33■□□□□ 0.68
NUP62-218ENST00000599788 TDRD9Q8NDG6 1382 aaKnown RBP19.32■□□□□ 0.68
NUP62-218ENST00000599788 WDR97A6NE52 1622 aa19.29■□□□□ 0.68
NUP62-218ENST00000599788 FGD5Q6ZNL6 1462 aa19.29■□□□□ 0.68
NUP62-218ENST00000599788 FBLN2P98095 1184 aa19.29■□□□□ 0.68
NUP62-218ENST00000599788 CUX1P39880 1505 aa19.28■□□□□ 0.68
NUP62-218ENST00000599788 SNAPC4Q5SXM2 1469 aa19.28■□□□□ 0.68
NUP62-218ENST00000599788 CLASP1Q7Z460 1538 aa19.25■□□□□ 0.67
NUP62-218ENST00000599788 MAGI1Q96QZ7 1491 aaPredicted RBP19.22■□□□□ 0.67
NUP62-218ENST00000599788 GRIN2BQ13224 1484 aa19.18■□□□□ 0.66
NUP62-218ENST00000599788 SYNJ1O43426 1573 aa19.17■□□□□ 0.66
NUP62-218ENST00000599788 SYNJ2O15056 1496 aa19.16■□□□□ 0.66
NUP62-218ENST00000599788 CHMP7Q8WUX9 453 aaPredicted RBP19.14■□□□□ 0.65
NUP62-218ENST00000599788 TRHP20396 242 aaPredicted RBP19.13■□□□□ 0.65
NUP62-218ENST00000599788 PBRM1Q86U86 1689 aa19.11■□□□□ 0.65
NUP62-218ENST00000599788 GAPVD1Q14C86 1478 aa19.09■□□□□ 0.65
NUP62-218ENST00000599788 ABCA5Q8WWZ7 1642 aa19.09■□□□□ 0.65
NUP62-218ENST00000599788 ABCA10Q8WWZ4 1543 aa19.08■□□□□ 0.64
NUP62-218ENST00000599788 ERCC6L2Q5T890 1561 aa18.95■□□□□ 0.62
NUP62-218ENST00000599788 GRIN2AQ12879 1464 aa18.95■□□□□ 0.62
NUP62-218ENST00000599788 ADAMTS12P58397 1594 aa18.94■□□□□ 0.62
NUP62-218ENST00000599788 BIVM-ERCC5R4GMW8 1640 aa18.92■□□□□ 0.62
NUP62-218ENST00000599788 NUP160Q12769 1436 aa18.92■□□□□ 0.62
NUP62-218ENST00000599788 WRNQ14191 1432 aaPredicted RBP eCLIP18.92■□□□□ 0.62
NUP62-218ENST00000599788 CEP170Q5SW79 1584 aa18.92■□□□□ 0.62
NUP62-218ENST00000599788 TOP2BQ02880 1626 aa18.91■□□□□ 0.62
NUP62-218ENST00000599788 SUPT5HO00267 1087 aaKnown RBP18.89■□□□□ 0.61
NUP62-218ENST00000599788 SHROOM2Q13796 1616 aa18.86■□□□□ 0.61
NUP62-218ENST00000599788 FHAD1B1AJZ9 1412 aa18.85■□□□□ 0.61
NUP62-218ENST00000599788 ERICH3Q5RHP9 1530 aa18.83■□□□□ 0.6
NUP62-218ENST00000599788 PRG4Q92954 1404 aaPredicted RBP18.7■□□□□ 0.58
NUP62-218ENST00000599788 RUSC2Q8N2Y8 1516 aa18.69■□□□□ 0.58
NUP62-218ENST00000599788 KIF13AQ9H1H9 1805 aa18.68■□□□□ 0.58
NUP62-218ENST00000599788 AEBP2Q6ZN18 517 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms