RNA–Protein interactions for RNA: ENST00000550482.1

HNRNPA1-209, Transcript of heterogeneous nuclear ribonucleoprotein A1, humanhuman

TSL 2

Gene HNRNPA1, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1-209ENST00000550482 NISCHQ9Y2I1 1504 aa36.85■■■■□ 3.49
HNRNPA1-209ENST00000550482 CCDC180Q9P1Z9 1646 aa32.84■■■□□ 2.85
HNRNPA1-209ENST00000550482 ABCC9O60706 1549 aa32.49■■■□□ 2.79
HNRNPA1-209ENST00000550482 RB1CC1Q8TDY2 1594 aa31.03■■■□□ 2.56
HNRNPA1-209ENST00000550482 DCAF8L2P0C7V8 631 aa31■■■□□ 2.55
HNRNPA1-209ENST00000550482 NACADO15069 1562 aa30.9■■■□□ 2.54
HNRNPA1-209ENST00000550482 ZCCHC6Q5VYS8 1495 aaKnown RBP30.64■■■□□ 2.5
HNRNPA1-209ENST00000550482 MYO15BQ96JP2 1530 aa30.54■■■□□ 2.48
HNRNPA1-209ENST00000550482 UNC13AQ9UPW8 1703 aa30.44■■■□□ 2.46
HNRNPA1-209ENST00000550482 DCAF1Q9Y4B6 1507 aa30.37■■■□□ 2.45
HNRNPA1-209ENST00000550482 PABPN1Q86U42 306 aaKnown RBP eCLIP30.33■■■□□ 2.45
HNRNPA1-209ENST00000550482 BICRAQ9NZM4 1560 aa30.16■■■□□ 2.42
HNRNPA1-209ENST00000550482 SCRIBQ14160 1630 aa30.08■■■□□ 2.41
HNRNPA1-209ENST00000550482 DNAJC5BQ9UF47 199 aa30.03■■■□□ 2.4
HNRNPA1-209ENST00000550482 SHROOM4Q9ULL8 1493 aa29.62■■■□□ 2.33
HNRNPA1-209ENST00000550482 EIF4G1Q04637 1599 aaKnown RBP29.37■■■□□ 2.29
HNRNPA1-209ENST00000550482 CC2D2AQ9P2K1 1620 aa29.34■■■□□ 2.29
HNRNPA1-209ENST00000550482 CECR2Q9BXF3 1484 aa29.15■■■□□ 2.26
HNRNPA1-209ENST00000550482 SMARCA4P51532 1647 aa28.68■■■□□ 2.18
HNRNPA1-209ENST00000550482 BAZ1AQ9NRL2 1556 aaPredicted RBP28.55■■■□□ 2.16
HNRNPA1-209ENST00000550482 ATAD2BQ9ULI0 1458 aa28.55■■■□□ 2.16
HNRNPA1-209ENST00000550482 NCAPD3P42695 1498 aa28.51■■■□□ 2.15
HNRNPA1-209ENST00000550482 SMARCA2P51531 1590 aa28.46■■■□□ 2.15
HNRNPA1-209ENST00000550482 MROH2BQ7Z745 1585 aa28.45■■■□□ 2.15
HNRNPA1-209ENST00000550482 HMGXB3Q12766 1538 aa28.36■■■□□ 2.13
HNRNPA1-209ENST00000550482 BAZ1BQ9UIG0 1483 aaKnown RBP28.31■■■□□ 2.12
HNRNPA1-209ENST00000550482 PEG3Q9GZU2 1588 aa28.31■■■□□ 2.12
HNRNPA1-209ENST00000550482 WIZO95785 1651 aa28.18■■■□□ 2.1
HNRNPA1-209ENST00000550482 NESP48681 1621 aa28.06■■■□□ 2.08
HNRNPA1-209ENST00000550482 RSF1Q96T23 1441 aaPredicted RBP27.99■■■□□ 2.07
HNRNPA1-209ENST00000550482 ERCC6Q03468 1493 aa27.96■■■□□ 2.07
HNRNPA1-209ENST00000550482 LAMC3Q9Y6N6 1575 aa27.82■■■□□ 2.04
HNRNPA1-209ENST00000550482 TOP2AP11388 1531 aaKnown RBP27.77■■■□□ 2.04
HNRNPA1-209ENST00000550482 KIF21AQ7Z4S6 1674 aa27.72■■■□□ 2.03
HNRNPA1-209ENST00000550482 CADPSQ9ULU8 1353 aa27.69■■■□□ 2.02
HNRNPA1-209ENST00000550482 CUX2O14529 1486 aa27.67■■■□□ 2.02
HNRNPA1-209ENST00000550482 THOC2Q8NI27 1593 aaKnown RBP27.64■■■□□ 2.01
HNRNPA1-209ENST00000550482 PDS5BQ9NTI5 1447 aa27.62■■■□□ 2.01
HNRNPA1-209ENST00000550482 CCDC88BA6NC98 1476 aa27.47■■□□□ 1.99
HNRNPA1-209ENST00000550482 CFTRP13569 1480 aa27.47■■□□□ 1.99
HNRNPA1-209ENST00000550482 FANCD2Q9BXW9 1451 aa27.42■■□□□ 1.98
HNRNPA1-209ENST00000550482 MRC2Q9UBG0 1479 aa27.41■■□□□ 1.98
HNRNPA1-209ENST00000550482 CEP164Q9UPV0 1460 aa27.4■■□□□ 1.98
HNRNPA1-209ENST00000550482 WDR62O43379 1518 aa27.32■■□□□ 1.96
HNRNPA1-209ENST00000550482 PRDM2Q13029 1718 aa27.3■■□□□ 1.96
HNRNPA1-209ENST00000550482 SUPT5HO00267 1087 aaKnown RBP27.2■■□□□ 1.94
HNRNPA1-209ENST00000550482 URB2Q14146 1524 aaKnown RBP27.19■■□□□ 1.94
HNRNPA1-209ENST00000550482 DNAJC5Q9H3Z4 198 aa27.12■■□□□ 1.93
HNRNPA1-209ENST00000550482 TOPBP1Q92547 1522 aa26.96■■□□□ 1.91
HNRNPA1-209ENST00000550482 DNMBPQ6XZF7 1577 aa26.9■■□□□ 1.9
HNRNPA1-209ENST00000550482 ABCC8Q09428 1581 aa26.83■■□□□ 1.89
HNRNPA1-209ENST00000550482 ZNF608Q9ULD9 1512 aaPredicted RBP26.8■■□□□ 1.88
HNRNPA1-209ENST00000550482 IFT140Q96RY7 1462 aa26.8■■□□□ 1.88
HNRNPA1-209ENST00000550482 POLA1P09884 1462 aaPredicted RBP26.72■■□□□ 1.87
HNRNPA1-209ENST00000550482 CUX1P39880 1505 aa26.7■■□□□ 1.87
HNRNPA1-209ENST00000550482 TARBP1Q13395 1621 aaKnown RBP26.7■■□□□ 1.86
HNRNPA1-209ENST00000550482 EIF4G3O43432 1585 aaKnown RBP26.68■■□□□ 1.86
HNRNPA1-209ENST00000550482 RAD54L2Q9Y4B4 1467 aa26.67■■□□□ 1.86
HNRNPA1-209ENST00000550482 FGD5Q6ZNL6 1462 aa26.64■■□□□ 1.86
HNRNPA1-209ENST00000550482 AQRO60306 1485 aaKnown RBP eCLIP26.61■■□□□ 1.851e-26■■■□□ 19.1
HNRNPA1-209ENST00000550482 SOGA1O94964 1423 aa26.58■■□□□ 1.85
HNRNPA1-209ENST00000550482 TDRD9Q8NDG6 1382 aaKnown RBP26.51■■□□□ 1.83
HNRNPA1-209ENST00000550482 OSCARQ8IYS5 282 aa26.49■■□□□ 1.83
HNRNPA1-209ENST00000550482 WDR97A6NE52 1622 aa26.44■■□□□ 1.82
HNRNPA1-209ENST00000550482 CHD1O14646 1710 aa26.42■■□□□ 1.82
HNRNPA1-209ENST00000550482 SYNJ1O43426 1573 aa26.42■■□□□ 1.82
HNRNPA1-209ENST00000550482 WRNQ14191 1432 aaPredicted RBP eCLIP26.39■■□□□ 1.82
HNRNPA1-209ENST00000550482 BIVM-ERCC5R4GMW8 1640 aa26.39■■□□□ 1.81
HNRNPA1-209ENST00000550482 TOP2BQ02880 1626 aa26.36■■□□□ 1.81
HNRNPA1-209ENST00000550482 FBLN2P98095 1184 aa26.35■■□□□ 1.81
HNRNPA1-209ENST00000550482 SNAPC4Q5SXM2 1469 aa26.35■■□□□ 1.81
HNRNPA1-209ENST00000550482 PBRM1Q86U86 1689 aa26.31■■□□□ 1.8
HNRNPA1-209ENST00000550482 ABCA10Q8WWZ4 1543 aa26.3■■□□□ 1.8
HNRNPA1-209ENST00000550482 GRIN2BQ13224 1484 aa26.29■■□□□ 1.8
HNRNPA1-209ENST00000550482 TRIM41Q8WV44 630 aa26.28■■□□□ 1.8
HNRNPA1-209ENST00000550482 GAPVD1Q14C86 1478 aa26.28■■□□□ 1.8
HNRNPA1-209ENST00000550482 ABCA5Q8WWZ7 1642 aa26.28■■□□□ 1.8
HNRNPA1-209ENST00000550482 MAGI1Q96QZ7 1491 aaPredicted RBP26.22■■□□□ 1.79
HNRNPA1-209ENST00000550482 RIMBP3CA6NJZ7 1639 aa26.2■■□□□ 1.78
HNRNPA1-209ENST00000550482 RIMBP3BA6NNM3 1639 aa26.2■■□□□ 1.78
HNRNPA1-209ENST00000550482 RIMBP3Q9UFD9 1639 aa26.2■■□□□ 1.78
HNRNPA1-209ENST00000550482 CHMP7Q8WUX9 453 aaPredicted RBP26.16■■□□□ 1.78
HNRNPA1-209ENST00000550482 SYNJ2O15056 1496 aa26.14■■□□□ 1.78
HNRNPA1-209ENST00000550482 ARHGEF11O15085 1522 aa26.14■■□□□ 1.77
HNRNPA1-209ENST00000550482 CLASP1Q7Z460 1538 aa26.06■■□□□ 1.76
HNRNPA1-209ENST00000550482 ADAMTS12P58397 1594 aa26.06■■□□□ 1.76
HNRNPA1-209ENST00000550482 GRIN2AQ12879 1464 aa25.98■■□□□ 1.75
HNRNPA1-209ENST00000550482 ERICH3Q5RHP9 1530 aa25.97■■□□□ 1.75
HNRNPA1-209ENST00000550482 FHAD1B1AJZ9 1412 aa25.93■■□□□ 1.74
HNRNPA1-209ENST00000550482 ARAP1Q96P48 1450 aa25.92■■□□□ 1.74
HNRNPA1-209ENST00000550482 CYB5RLQ6IPT4 315 aa25.92■■□□□ 1.74
HNRNPA1-209ENST00000550482 CEP170Q5SW79 1584 aa25.9■■□□□ 1.74
HNRNPA1-209ENST00000550482 NUP160Q12769 1436 aa25.83■■□□□ 1.73
HNRNPA1-209ENST00000550482 KIF27Q86VH2 1401 aa25.83■■□□□ 1.73
HNRNPA1-209ENST00000550482 ERCC6L2Q5T890 1561 aa25.78■■□□□ 1.72
HNRNPA1-209ENST00000550482 IGF1RP08069 1367 aa25.77■■□□□ 1.72
HNRNPA1-209ENST00000550482 CUL7Q14999 1698 aa25.72■■□□□ 1.71
HNRNPA1-209ENST00000550482 SHROOM2Q13796 1616 aa25.7■■□□□ 1.7
HNRNPA1-209ENST00000550482 RUSC2Q8N2Y8 1516 aa25.68■■□□□ 1.7
HNRNPA1-209ENST00000550482 CARMIL1Q5VZK9 1371 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms