RNA–Protein interactions for RNA: ENST00000639914.1

PIK3C3-217, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 5 BASIC

Gene PIK3C3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-217ENST00000639914 AEBP2Q6ZN18 517 aaPredicted RBP11.12□□□□□ -0.63
PIK3C3-217ENST00000639914 NISCHQ9Y2I1 1504 aa10.75□□□□□ -0.69
PIK3C3-217ENST00000639914 CHIC1Q5VXU3 224 aa10.74□□□□□ -0.69
PIK3C3-217ENST00000639914 DNAJC5Q9H3Z4 198 aa10.35□□□□□ -0.75
PIK3C3-217ENST00000639914 DNAJC5BQ9UF47 199 aa9.97□□□□□ -0.81
PIK3C3-217ENST00000639914 CCDC180Q9P1Z9 1646 aa9.8□□□□□ -0.84
PIK3C3-217ENST00000639914 ABCC9O60706 1549 aa9.7□□□□□ -0.86
PIK3C3-217ENST00000639914 PHF23Q9BUL5 403 aaPredicted RBP9.54□□□□□ -0.88
PIK3C3-217ENST00000639914 CUX2O14529 1486 aa9.39□□□□□ -0.91
PIK3C3-217ENST00000639914 SENP3Q9H4L4 574 aaPredicted RBP9.27□□□□□ -0.92
PIK3C3-217ENST00000639914 RB1CC1Q8TDY2 1594 aa9.23□□□□□ -0.93
PIK3C3-217ENST00000639914 SHROOM4Q9ULL8 1493 aa9.2□□□□□ -0.94
PIK3C3-217ENST00000639914 NACADO15069 1562 aa9.19□□□□□ -0.94
PIK3C3-217ENST00000639914 MYO15BQ96JP2 1530 aa9.17□□□□□ -0.94
PIK3C3-217ENST00000639914 EHMT2Q96KQ7 1210 aa9.09□□□□□ -0.95
PIK3C3-217ENST00000639914 CECR2Q9BXF3 1484 aa9.06□□□□□ -0.96
PIK3C3-217ENST00000639914 UNC13AQ9UPW8 1703 aa9.05□□□□□ -0.96
PIK3C3-217ENST00000639914 DCAF1Q9Y4B6 1507 aa9.03□□□□□ -0.96
PIK3C3-217ENST00000639914 CC2D2AQ9P2K1 1620 aa8.97□□□□□ -0.97
PIK3C3-217ENST00000639914 ZCCHC6Q5VYS8 1495 aaKnown RBP8.95□□□□□ -0.98
PIK3C3-217ENST00000639914 BICRAQ9NZM4 1560 aa8.93□□□□□ -0.98
PIK3C3-217ENST00000639914 TRIM41Q8WV44 630 aa8.93□□□□□ -0.98
PIK3C3-217ENST00000639914 ILDR1Q86SU0 546 aaPredicted RBP8.82□□□□□ -1
PIK3C3-217ENST00000639914 PABPN1Q86U42 306 aaKnown RBP eCLIP8.79□□□□□ -1
PIK3C3-217ENST00000639914 EIF4G1Q04637 1599 aaKnown RBP8.72□□□□□ -1.01
PIK3C3-217ENST00000639914 FOXD1Q16676 465 aa8.71□□□□□ -1.01
PIK3C3-217ENST00000639914 SCRIBQ14160 1630 aa8.7□□□□□ -1.02
PIK3C3-217ENST00000639914 DCAF8L2P0C7V8 631 aa8.69□□□□□ -1.02
PIK3C3-217ENST00000639914 PLPPR3Q6T4P5 718 aa8.68□□□□□ -1.02
PIK3C3-217ENST00000639914 SUPT5HO00267 1087 aaKnown RBP8.68□□□□□ -1.02
PIK3C3-217ENST00000639914 SLC24A1O60721 1099 aa8.61□□□□□ -1.03
PIK3C3-217ENST00000639914 ERCC6Q03468 1493 aa8.58□□□□□ -1.04
PIK3C3-217ENST00000639914 THOC2Q8NI27 1593 aaKnown RBP8.56□□□□□ -1.04
PIK3C3-217ENST00000639914 ERCC6L2Q5T890 1561 aa8.55□□□□□ -1.04
PIK3C3-217ENST00000639914 POTEDQ86YR6 584 aa8.54□□□□□ -1.04
PIK3C3-217ENST00000639914 KCNA4P22459 653 aa8.52□□□□□ -1.04
PIK3C3-217ENST00000639914 RIMBP3CA6NJZ7 1639 aa8.52□□□□□ -1.04
PIK3C3-217ENST00000639914 RIMBP3BA6NNM3 1639 aa8.52□□□□□ -1.04
PIK3C3-217ENST00000639914 RIMBP3Q9UFD9 1639 aa8.52□□□□□ -1.04
PIK3C3-217ENST00000639914 SOCS7O14512 581 aa8.5□□□□□ -1.05
PIK3C3-217ENST00000639914 BAZ1AQ9NRL2 1556 aaPredicted RBP8.5□□□□□ -1.05
PIK3C3-217ENST00000639914 PPP6R1Q9UPN7 881 aa8.45□□□□□ -1.06
PIK3C3-217ENST00000639914 NCAPD3P42695 1498 aa8.43□□□□□ -1.06
PIK3C3-217ENST00000639914 HMGXB3Q12766 1538 aa8.43□□□□□ -1.06
PIK3C3-217ENST00000639914 PEG3Q9GZU2 1588 aa8.43□□□□□ -1.06
PIK3C3-217ENST00000639914 ADRA2BP18089 450 aa8.43□□□□□ -1.06
PIK3C3-217ENST00000639914 SMARCA4P51532 1647 aa8.41□□□□□ -1.06
PIK3C3-217ENST00000639914 LMTK3Q96Q04 1460 aa8.4□□□□□ -1.06
PIK3C3-217ENST00000639914 SMARCA2P51531 1590 aa8.4□□□□□ -1.06
PIK3C3-217ENST00000639914 FBXO41Q8TF61 875 aa8.38□□□□□ -1.07
PIK3C3-217ENST00000639914 ATAD2BQ9ULI0 1458 aa8.36□□□□□ -1.07
PIK3C3-217ENST00000639914 CSRNP3Q8WYN3 585 aa8.36□□□□□ -1.07
PIK3C3-217ENST00000639914 OSCARQ8IYS5 282 aa8.34□□□□□ -1.07
PIK3C3-217ENST00000639914 ARHGEF11O15085 1522 aa8.33□□□□□ -1.08
PIK3C3-217ENST00000639914 RTN4Q9NQC3 1192 aaKnown RBP8.31□□□□□ -1.08
PIK3C3-217ENST00000639914 LAMC3Q9Y6N6 1575 aa8.28□□□□□ -1.08
PIK3C3-217ENST00000639914 RSF1Q96T23 1441 aaPredicted RBP8.27□□□□□ -1.09
PIK3C3-217ENST00000639914 BAZ1BQ9UIG0 1483 aaKnown RBP8.26□□□□□ -1.09
PIK3C3-217ENST00000639914 MROH2BQ7Z745 1585 aa8.22□□□□□ -1.09
PIK3C3-217ENST00000639914 WDR62O43379 1518 aa8.22□□□□□ -1.09
PIK3C3-217ENST00000639914 PIAS4Q8N2W9 510 aaPredicted RBP8.21□□□□□ -1.1
PIK3C3-217ENST00000639914 KIF21AQ7Z4S6 1674 aa8.18□□□□□ -1.1
PIK3C3-217ENST00000639914 TRHP20396 242 aaPredicted RBP8.18□□□□□ -1.1
PIK3C3-217ENST00000639914 PRDM2Q13029 1718 aa8.17□□□□□ -1.1
PIK3C3-217ENST00000639914 NESP48681 1621 aa8.15□□□□□ -1.11
PIK3C3-217ENST00000639914 ARAP1Q96P48 1450 aa8.15□□□□□ -1.11
PIK3C3-217ENST00000639914 WIZO95785 1651 aa8.15□□□□□ -1.11
PIK3C3-217ENST00000639914 PDS5BQ9NTI5 1447 aa8.14□□□□□ -1.11
PIK3C3-217ENST00000639914 LOC105371045A0A1W2PR82 267 aa8.13□□□□□ -1.11
PIK3C3-217ENST00000639914 HRCP23327 699 aa8.12□□□□□ -1.11
PIK3C3-217ENST00000639914 PCGF6Q9BYE7 350 aa8.12□□□□□ -1.11
PIK3C3-217ENST00000639914 TOP2AP11388 1531 aaKnown RBP8.11□□□□□ -1.11
PIK3C3-217ENST00000639914 MRC2Q9UBG0 1479 aa8.11□□□□□ -1.11
PIK3C3-217ENST00000639914 CADPSQ9ULU8 1353 aa8.11□□□□□ -1.11
PIK3C3-217ENST00000639914 SLC4A1APQ9BWU0 796 aaKnown RBP8.09□□□□□ -1.11
PIK3C3-217ENST00000639914 HECW2Q9P2P5 1572 aa8.09□□□□□ -1.11
PIK3C3-217ENST00000639914 SPATA31D1Q6ZQQ2 1576 aa8.08□□□□□ -1.12
PIK3C3-217ENST00000639914 CFTRP13569 1480 aa8.07□□□□□ -1.12
PIK3C3-217ENST00000639914 TRIM26Q12899 539 aaPredicted RBP8.04□□□□□ -1.12
PIK3C3-217ENST00000639914 CEP164Q9UPV0 1460 aa8.03□□□□□ -1.12
PIK3C3-217ENST00000639914 ILDR2Q71H61 639 aa8.02□□□□□ -1.13
PIK3C3-217ENST00000639914 FANCD2Q9BXW9 1451 aa8.01□□□□□ -1.13
PIK3C3-217ENST00000639914 FAM9AQ8IZU1 332 aaPredicted RBP8.01□□□□□ -1.13
PIK3C3-217ENST00000639914 KDM4FA0A1W2PPD8 638 aa7.97□□□□□ -1.13
PIK3C3-217ENST00000639914 MYT1Q01538 1121 aa7.96□□□□□ -1.14
PIK3C3-217ENST00000639914 DISP3Q9P2K9 1392 aa7.96□□□□□ -1.14
PIK3C3-217ENST00000639914 ABCC8Q09428 1581 aa7.95□□□□□ -1.14
PIK3C3-217ENST00000639914 URB2Q14146 1524 aaKnown RBP7.95□□□□□ -1.14
PIK3C3-217ENST00000639914 CCDC88BA6NC98 1476 aa7.94□□□□□ -1.14
PIK3C3-217ENST00000639914 WDR97A6NE52 1622 aa7.94□□□□□ -1.14
PIK3C3-217ENST00000639914 CYB5RLQ6IPT4 315 aa7.93□□□□□ -1.14
PIK3C3-217ENST00000639914 ZEB1P37275 1124 aaPredicted RBP7.92□□□□□ -1.14
PIK3C3-217ENST00000639914 DNMBPQ6XZF7 1577 aa7.91□□□□□ -1.14
PIK3C3-217ENST00000639914 ZBTB22O15209 634 aa7.91□□□□□ -1.14
PIK3C3-217ENST00000639914 KDM6BO15054 1643 aa7.91□□□□□ -1.14
PIK3C3-217ENST00000639914 IFT140Q96RY7 1462 aa7.91□□□□□ -1.14
PIK3C3-217ENST00000639914 MSH5O43196 834 aa7.89□□□□□ -1.15
PIK3C3-217ENST00000639914 SYNJ2O15056 1496 aa7.89□□□□□ -1.15
PIK3C3-217ENST00000639914 TOPBP1Q92547 1522 aa7.88□□□□□ -1.15
PIK3C3-217ENST00000639914 TARBP1Q13395 1621 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms