RNA–Protein interactions for RNA: ENST00000537440.5

TRIT1-214, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 5 BASIC

Gene TRIT1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-214ENST00000537440 NISCHQ9Y2I1 1504 aa31.74■■■□□ 2.67
TRIT1-214ENST00000537440 CCDC180Q9P1Z9 1646 aa27.47■■□□□ 1.99
TRIT1-214ENST00000537440 ZCCHC6Q5VYS8 1495 aaKnown RBP26.74■■□□□ 1.87
TRIT1-214ENST00000537440 SHROOM4Q9ULL8 1493 aa26.29■■□□□ 1.8
TRIT1-214ENST00000537440 DCAF8L2P0C7V8 631 aa26.23■■□□□ 1.79
TRIT1-214ENST00000537440 DCAF1Q9Y4B6 1507 aa26.19■■□□□ 1.78
TRIT1-214ENST00000537440 ABCC9O60706 1549 aa25.76■■□□□ 1.71
TRIT1-214ENST00000537440 MYO15BQ96JP2 1530 aa25.73■■□□□ 1.71
TRIT1-214ENST00000537440 NACADO15069 1562 aa25.51■■□□□ 1.67
TRIT1-214ENST00000537440 SUPT5HO00267 1087 aaKnown RBP25.47■■□□□ 1.67
TRIT1-214ENST00000537440 SCRIBQ14160 1630 aa25.41■■□□□ 1.66
TRIT1-214ENST00000537440 RB1CC1Q8TDY2 1594 aa25.23■■□□□ 1.63
TRIT1-214ENST00000537440 RSF1Q96T23 1441 aaPredicted RBP24.79■■□□□ 1.56
TRIT1-214ENST00000537440 UNC13AQ9UPW8 1703 aa24.73■■□□□ 1.55
TRIT1-214ENST00000537440 CECR2Q9BXF3 1484 aa24.68■■□□□ 1.54
TRIT1-214ENST00000537440 MROH2BQ7Z745 1585 aa24.57■■□□□ 1.52
TRIT1-214ENST00000537440 CHIC1Q5VXU3 224 aa24.52■■□□□ 1.52
TRIT1-214ENST00000537440 BAZ1AQ9NRL2 1556 aaPredicted RBP24.49■■□□□ 1.51
TRIT1-214ENST00000537440 BICRAQ9NZM4 1560 aa24.46■■□□□ 1.51
TRIT1-214ENST00000537440 WIZO95785 1651 aa24.4■■□□□ 1.5
TRIT1-214ENST00000537440 PABPN1Q86U42 306 aaKnown RBP eCLIP24.39■■□□□ 1.49
TRIT1-214ENST00000537440 SMARCA4P51532 1647 aa24.34■■□□□ 1.49
TRIT1-214ENST00000537440 TOP2AP11388 1531 aaKnown RBP24.13■■□□□ 1.45
TRIT1-214ENST00000537440 PEG3Q9GZU2 1588 aa23.98■■□□□ 1.43
TRIT1-214ENST00000537440 SMARCA2P51531 1590 aa23.93■■□□□ 1.42
TRIT1-214ENST00000537440 CCDC88BA6NC98 1476 aa23.9■■□□□ 1.42
TRIT1-214ENST00000537440 TRIM41Q8WV44 630 aa23.88■■□□□ 1.41
TRIT1-214ENST00000537440 EIF4G1Q04637 1599 aaKnown RBP23.86■■□□□ 1.41
TRIT1-214ENST00000537440 ATAD2BQ9ULI0 1458 aa23.84■■□□□ 1.41
TRIT1-214ENST00000537440 BAZ1BQ9UIG0 1483 aaKnown RBP23.76■■□□□ 1.39
TRIT1-214ENST00000537440 LOC105371045A0A1W2PR82 267 aa23.63■■□□□ 1.37
TRIT1-214ENST00000537440 ABCC8Q09428 1581 aa23.56■■□□□ 1.36
TRIT1-214ENST00000537440 HMGXB3Q12766 1538 aa23.55■■□□□ 1.36
TRIT1-214ENST00000537440 NCAPD3P42695 1498 aa23.54■■□□□ 1.36
TRIT1-214ENST00000537440 FAM9AQ8IZU1 332 aaPredicted RBP23.52■■□□□ 1.36
TRIT1-214ENST00000537440 WRNQ14191 1432 aaPredicted RBP eCLIP23.33■■□□□ 1.331e-6■■■■■ 58.5
TRIT1-214ENST00000537440 CC2D2AQ9P2K1 1620 aa23.27■■□□□ 1.32
TRIT1-214ENST00000537440 SYNJ1O43426 1573 aa23.23■■□□□ 1.31
TRIT1-214ENST00000537440 EHMT2Q96KQ7 1210 aa23.23■■□□□ 1.31
TRIT1-214ENST00000537440 SOGA1O94964 1423 aa23.19■■□□□ 1.3
TRIT1-214ENST00000537440 EEA1Q15075 1411 aa23.17■■□□□ 1.3
TRIT1-214ENST00000537440 CFTRP13569 1480 aa23.14■■□□□ 1.3
TRIT1-214ENST00000537440 RUSC2Q8N2Y8 1516 aa23.08■■□□□ 1.28
TRIT1-214ENST00000537440 TOP2BQ02880 1626 aa23.08■■□□□ 1.28
TRIT1-214ENST00000537440 CSRNP3Q8WYN3 585 aa23.04■■□□□ 1.28
TRIT1-214ENST00000537440 BIVM-ERCC5R4GMW8 1640 aa23.04■■□□□ 1.28
TRIT1-214ENST00000537440 PRDM2Q13029 1718 aa23.02■■□□□ 1.28
TRIT1-214ENST00000537440 CADPSQ9ULU8 1353 aa23■■□□□ 1.27
TRIT1-214ENST00000537440 PCGF6Q9BYE7 350 aa22.96■■□□□ 1.27
TRIT1-214ENST00000537440 CUX1P39880 1505 aa22.95■■□□□ 1.26
TRIT1-214ENST00000537440 GOLGA3Q08378 1498 aa22.9■■□□□ 1.26
TRIT1-214ENST00000537440 TNIKQ9UKE5 1360 aa22.88■■□□□ 1.25
TRIT1-214ENST00000537440 CEP164Q9UPV0 1460 aa22.85■■□□□ 1.25
TRIT1-214ENST00000537440 KIF21BO75037 1637 aa22.85■■□□□ 1.25
TRIT1-214ENST00000537440 UBTFP17480 764 aaKnown RBP22.83■■□□□ 1.25
TRIT1-214ENST00000537440 CEP162Q5TB80 1403 aa22.82■■□□□ 1.24
TRIT1-214ENST00000537440 TRIM26Q12899 539 aaPredicted RBP22.82■■□□□ 1.24
TRIT1-214ENST00000537440 FANCD2Q9BXW9 1451 aa22.77■■□□□ 1.24
TRIT1-214ENST00000537440 NESP48681 1621 aa22.72■■□□□ 1.23
TRIT1-214ENST00000537440 KIF27Q86VH2 1401 aa22.71■■□□□ 1.23
TRIT1-214ENST00000537440 RAPGEF2Q9Y4G8 1499 aa22.7■■□□□ 1.22
TRIT1-214ENST00000537440 LAMC3Q9Y6N6 1575 aa22.69■■□□□ 1.22
TRIT1-214ENST00000537440 FGD5Q6ZNL6 1462 aa22.65■■□□□ 1.22
TRIT1-214ENST00000537440 ERICH3Q5RHP9 1530 aa22.63■■□□□ 1.21
TRIT1-214ENST00000537440 PRXQ9BXM0 1461 aa22.62■■□□□ 1.21
TRIT1-214ENST00000537440 DNAJC5BQ9UF47 199 aa22.62■■□□□ 1.21
TRIT1-214ENST00000537440 DNMBPQ6XZF7 1577 aa22.61■■□□□ 1.21
TRIT1-214ENST00000537440 CUX2O14529 1486 aa22.59■■□□□ 1.21
TRIT1-214ENST00000537440 HRCP23327 699 aa22.57■■□□□ 1.2
TRIT1-214ENST00000537440 CLIP1P30622 1438 aa22.56■■□□□ 1.2
TRIT1-214ENST00000537440 TOPBP1Q92547 1522 aa22.55■■□□□ 1.2
TRIT1-214ENST00000537440 PPARGC1BQ86YN6 1023 aaKnown RBP22.55■■□□□ 1.2
TRIT1-214ENST00000537440 PDS5BQ9NTI5 1447 aa22.53■■□□□ 1.2
TRIT1-214ENST00000537440 POLA1P09884 1462 aaPredicted RBP22.48■■□□□ 1.19
TRIT1-214ENST00000537440 URB2Q14146 1524 aaKnown RBP22.46■■□□□ 1.19
TRIT1-214ENST00000537440 IGF1RP08069 1367 aa22.45■■□□□ 1.19
TRIT1-214ENST00000537440 RAD54L2Q9Y4B4 1467 aa22.43■■□□□ 1.18
TRIT1-214ENST00000537440 ABCA10Q8WWZ4 1543 aa22.43■■□□□ 1.18
TRIT1-214ENST00000537440 KIF21AQ7Z4S6 1674 aa22.42■■□□□ 1.18
TRIT1-214ENST00000537440 RANGAP1P46060 587 aaPredicted RBP22.41■■□□□ 1.18
TRIT1-214ENST00000537440 VPS8Q8N3P4 1428 aa22.4■■□□□ 1.18
TRIT1-214ENST00000537440 CARMIL1Q5VZK9 1371 aa22.37■■□□□ 1.17
TRIT1-214ENST00000537440 TTBK1Q5TCY1 1321 aaPredicted RBP22.33■■□□□ 1.16
TRIT1-214ENST00000537440 WDR97A6NE52 1622 aa22.31■■□□□ 1.16
TRIT1-214ENST00000537440 ARAP1Q96P48 1450 aa22.28■■□□□ 1.16
TRIT1-214ENST00000537440 CUL7Q14999 1698 aa22.24■■□□□ 1.15
TRIT1-214ENST00000537440 APLP2Q06481 763 aa22.23■■□□□ 1.15
TRIT1-214ENST00000537440 MRC2Q9UBG0 1479 aa22.23■■□□□ 1.15
TRIT1-214ENST00000537440 ABCA5Q8WWZ7 1642 aa22.22■■□□□ 1.15
TRIT1-214ENST00000537440 ARHGAP35Q9NRY4 1499 aa22.21■■□□□ 1.15
TRIT1-214ENST00000537440 TDRD9Q8NDG6 1382 aaKnown RBP22.19■■□□□ 1.14
TRIT1-214ENST00000537440 GAPVD1Q14C86 1478 aa22.17■■□□□ 1.14
TRIT1-214ENST00000537440 TARBP1Q13395 1621 aaKnown RBP22.17■■□□□ 1.14
TRIT1-214ENST00000537440 ZEB1P37275 1124 aaPredicted RBP22.09■■□□□ 1.13
TRIT1-214ENST00000537440 WDR62O43379 1518 aa22.08■■□□□ 1.12
TRIT1-214ENST00000537440 CTTNBP2Q8WZ74 1663 aa22.06■■□□□ 1.12
TRIT1-214ENST00000537440 ERCC6Q03468 1493 aa22.04■■□□□ 1.12
TRIT1-214ENST00000537440 PBRM1Q86U86 1689 aa22.01■■□□□ 1.11
TRIT1-214ENST00000537440 IFT140Q96RY7 1462 aa22■■□□□ 1.11
TRIT1-214ENST00000537440 EFCAB5A4FU69 1503 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms