RNA–Protein interactions for RNA: ENST00000352066.7

NUP62-201, Transcript of nucleoporin 62, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP62, Length 2,870 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP62-201ENST00000352066 NISCHQ9Y2I1 1504 aa24.72■■□□□ 1.55
NUP62-201ENST00000352066 CCDC180Q9P1Z9 1646 aa21.63■■□□□ 1.05
NUP62-201ENST00000352066 SHROOM4Q9ULL8 1493 aa21.61■■□□□ 1.05
NUP62-201ENST00000352066 SUPT5HO00267 1087 aaKnown RBP21.33■■□□□ 1
NUP62-201ENST00000352066 DCAF8L2P0C7V8 631 aa21.06■□□□□ 0.96
NUP62-201ENST00000352066 ZCCHC6Q5VYS8 1495 aaKnown RBP20.88■□□□□ 0.93
NUP62-201ENST00000352066 CHIC1Q5VXU3 224 aa20.6■□□□□ 0.89
NUP62-201ENST00000352066 DCAF1Q9Y4B6 1507 aa20.56■□□□□ 0.88
NUP62-201ENST00000352066 MYO15BQ96JP2 1530 aa20.43■□□□□ 0.86
NUP62-201ENST00000352066 PCGF6Q9BYE7 350 aa20.31■□□□□ 0.84
NUP62-201ENST00000352066 HRCP23327 699 aa20.24■□□□□ 0.83
NUP62-201ENST00000352066 LOC105371045A0A1W2PR82 267 aa20.14■□□□□ 0.81
NUP62-201ENST00000352066 NACADO15069 1562 aa20.08■□□□□ 0.8
NUP62-201ENST00000352066 ABCC9O60706 1549 aa20.03■□□□□ 0.8
NUP62-201ENST00000352066 PPARGC1BQ86YN6 1023 aaKnown RBP19.93■□□□□ 0.78
NUP62-201ENST00000352066 RB1CC1Q8TDY2 1594 aa19.85■□□□□ 0.77
NUP62-201ENST00000352066 TRIM41Q8WV44 630 aa19.77■□□□□ 0.76
NUP62-201ENST00000352066 FAM9AQ8IZU1 332 aaPredicted RBP19.76■□□□□ 0.75
NUP62-201ENST00000352066 SCRIBQ14160 1630 aa19.75■□□□□ 0.75
NUP62-201ENST00000352066 TRIM26Q12899 539 aaPredicted RBP19.75■□□□□ 0.75
NUP62-201ENST00000352066 EHMT2Q96KQ7 1210 aa19.72■□□□□ 0.75
NUP62-201ENST00000352066 RSF1Q96T23 1441 aaPredicted RBP19.7■□□□□ 0.74
NUP62-201ENST00000352066 UNC13AQ9UPW8 1703 aa19.39■□□□□ 0.69
NUP62-201ENST00000352066 CECR2Q9BXF3 1484 aa19.38■□□□□ 0.69
NUP62-201ENST00000352066 ZEB1P37275 1124 aaPredicted RBP19.36■□□□□ 0.69
NUP62-201ENST00000352066 MROH2BQ7Z745 1585 aa19.28■□□□□ 0.68
NUP62-201ENST00000352066 BICRAQ9NZM4 1560 aa19.21■□□□□ 0.67
NUP62-201ENST00000352066 WIZO95785 1651 aa19.16■□□□□ 0.66
NUP62-201ENST00000352066 TTBK1Q5TCY1 1321 aaPredicted RBP19.1■□□□□ 0.65
NUP62-201ENST00000352066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.05■□□□□ 0.64
NUP62-201ENST00000352066 CCER1Q8TC90 406 aaPredicted RBP19.04■□□□□ 0.64
NUP62-201ENST00000352066 BAZ1AQ9NRL2 1556 aaPredicted RBP19.02■□□□□ 0.63
NUP62-201ENST00000352066 SMARCA4P51532 1647 aa18.9■□□□□ 0.62
NUP62-201ENST00000352066 UBTFP17480 764 aaKnown RBP18.89■□□□□ 0.61
NUP62-201ENST00000352066 ABCC8Q09428 1581 aa18.88■□□□□ 0.61
NUP62-201ENST00000352066 CCDC88BA6NC98 1476 aa18.85■□□□□ 0.61
NUP62-201ENST00000352066 PEG3Q9GZU2 1588 aa18.83■□□□□ 0.61
NUP62-201ENST00000352066 PABPN1Q86U42 306 aaKnown RBP eCLIP18.83■□□□□ 0.6
NUP62-201ENST00000352066 TOP2AP11388 1531 aaKnown RBP18.79■□□□□ 0.6
NUP62-201ENST00000352066 SOGA1O94964 1423 aa18.78■□□□□ 0.6
NUP62-201ENST00000352066 SCAF1Q9H7N4 1312 aaKnown RBP18.78■□□□□ 0.6
NUP62-201ENST00000352066 CSRNP3Q8WYN3 585 aa18.77■□□□□ 0.6
NUP62-201ENST00000352066 CEP162Q5TB80 1403 aa18.76■□□□□ 0.59
NUP62-201ENST00000352066 EIF4G1Q04637 1599 aaKnown RBP18.75■□□□□ 0.59
NUP62-201ENST00000352066 SMARCA2P51531 1590 aa18.71■□□□□ 0.59
NUP62-201ENST00000352066 DIEXFQ68CQ4 756 aaKnown RBP18.68■□□□□ 0.58
NUP62-201ENST00000352066 TNIKQ9UKE5 1360 aa18.67■□□□□ 0.58
NUP62-201ENST00000352066 RUSC2Q8N2Y8 1516 aa18.66■□□□□ 0.58
NUP62-201ENST00000352066 RANGAP1P46060 587 aaPredicted RBP18.63■□□□□ 0.57
NUP62-201ENST00000352066 WRNQ14191 1432 aaPredicted RBP eCLIP18.63■□□□□ 0.57
NUP62-201ENST00000352066 EEA1Q15075 1411 aa18.59■□□□□ 0.57
NUP62-201ENST00000352066 HNRNPUL2Q1KMD3 747 aaKnown RBP18.57■□□□□ 0.56
NUP62-201ENST00000352066 ACIN1Q9UKV3 1341 aaKnown RBP18.56■□□□□ 0.56
NUP62-201ENST00000352066 ATAD2BQ9ULI0 1458 aa18.56■□□□□ 0.56
NUP62-201ENST00000352066 NEUROD1Q13562 356 aa18.56■□□□□ 0.56
NUP62-201ENST00000352066 GOLGA3Q08378 1498 aa18.53■□□□□ 0.56
NUP62-201ENST00000352066 PELP1Q8IZL8 1130 aaKnown RBP18.53■□□□□ 0.56
NUP62-201ENST00000352066 APLP2Q06481 763 aa18.53■□□□□ 0.56
NUP62-201ENST00000352066 CENPBP07199 599 aaPredicted RBP18.52■□□□□ 0.56
NUP62-201ENST00000352066 HMGXB3Q12766 1538 aa18.52■□□□□ 0.56
NUP62-201ENST00000352066 NCAPD3P42695 1498 aa18.48■□□□□ 0.55
NUP62-201ENST00000352066 ZNF316A6NFI3 1004 aaPredicted RBP18.44■□□□□ 0.54
NUP62-201ENST00000352066 GTF3C3Q9Y5Q9 886 aa18.44■□□□□ 0.54
NUP62-201ENST00000352066 BAZ1BQ9UIG0 1483 aaKnown RBP18.42■□□□□ 0.54
NUP62-201ENST00000352066 YTHDC1Q96MU7 727 aaKnown RBP18.41■□□□□ 0.54
NUP62-201ENST00000352066 CLIP1P30622 1438 aa18.41■□□□□ 0.54
NUP62-201ENST00000352066 CEP164Q9UPV0 1460 aa18.4■□□□□ 0.54
NUP62-201ENST00000352066 SYNJ1O43426 1573 aa18.35■□□□□ 0.53
NUP62-201ENST00000352066 CC2D2AQ9P2K1 1620 aa18.29■□□□□ 0.52
NUP62-201ENST00000352066 RAPGEF2Q9Y4G8 1499 aa18.28■□□□□ 0.52
NUP62-201ENST00000352066 VPS8Q8N3P4 1428 aa18.27■□□□□ 0.52
NUP62-201ENST00000352066 MIER1Q8N108 512 aa18.24■□□□□ 0.51
NUP62-201ENST00000352066 KIF21BO75037 1637 aa18.23■□□□□ 0.51
NUP62-201ENST00000352066 ITGAEP38570 1179 aa18.1■□□□□ 0.49
NUP62-201ENST00000352066 KANK4Q5T7N3 995 aaPredicted RBP18.09■□□□□ 0.49
NUP62-201ENST00000352066 PRDM2Q13029 1718 aa18.07■□□□□ 0.48
NUP62-201ENST00000352066 TOP2BQ02880 1626 aa18.05■□□□□ 0.48
NUP62-201ENST00000352066 CFTRP13569 1480 aa18.04■□□□□ 0.48
NUP62-201ENST00000352066 KIF27Q86VH2 1401 aa17.98■□□□□ 0.47
NUP62-201ENST00000352066 PRXQ9BXM0 1461 aa17.98■□□□□ 0.47
NUP62-201ENST00000352066 DHX57Q6P158 1386 aaKnown RBP17.97■□□□□ 0.47
NUP62-201ENST00000352066 ARAP1Q96P48 1450 aa17.96■□□□□ 0.46
NUP62-201ENST00000352066 CLSPNQ9HAW4 1339 aa17.94■□□□□ 0.46
NUP62-201ENST00000352066 ERICH3Q5RHP9 1530 aa17.93■□□□□ 0.46
NUP62-201ENST00000352066 MYT1Q01538 1121 aa17.93■□□□□ 0.46
NUP62-201ENST00000352066 CADPSQ9ULU8 1353 aa17.91■□□□□ 0.46
NUP62-201ENST00000352066 ATP1B4Q9UN42 357 aaPredicted RBP17.91■□□□□ 0.46
NUP62-201ENST00000352066 CUX1P39880 1505 aa17.91■□□□□ 0.46
NUP62-201ENST00000352066 BIVM-ERCC5R4GMW8 1640 aa17.91■□□□□ 0.46
NUP62-201ENST00000352066 LAMC3Q9Y6N6 1575 aa17.87■□□□□ 0.45
NUP62-201ENST00000352066 CCNB3Q8WWL7 1395 aa17.87■□□□□ 0.45
NUP62-201ENST00000352066 P3H3Q8IVL6 736 aa17.83■□□□□ 0.45
NUP62-201ENST00000352066 FAM50AQ14320 339 aaKnown RBP17.81■□□□□ 0.44
NUP62-201ENST00000352066 ARHGAP35Q9NRY4 1499 aa17.81■□□□□ 0.44
NUP62-201ENST00000352066 RRBP1Q9P2E9 1410 aaKnown RBP17.81■□□□□ 0.44
NUP62-201ENST00000352066 CUX2O14529 1486 aa17.81■□□□□ 0.44
NUP62-201ENST00000352066 IGF1RP08069 1367 aa17.76■□□□□ 0.43
NUP62-201ENST00000352066 CARMIL1Q5VZK9 1371 aa17.74■□□□□ 0.43
NUP62-201ENST00000352066 RAB3GAP2Q9H2M9 1393 aa17.74■□□□□ 0.43
NUP62-201ENST00000352066 SIN3AQ96ST3 1273 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms