RNA–Protein interactions for RNA: ENST00000594673.5

NUP62-204, Transcript of nucleoporin 62, humanhuman

TSL 5

Gene NUP62, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP62-204ENST00000594673 NISCHQ9Y2I1 1504 aa37.97■■■■□ 3.67
NUP62-204ENST00000594673 CCDC180Q9P1Z9 1646 aa33.66■■■□□ 2.98
NUP62-204ENST00000594673 ABCC9O60706 1549 aa32.74■■■□□ 2.83
NUP62-204ENST00000594673 DCAF8L2P0C7V8 631 aa31.73■■■□□ 2.67
NUP62-204ENST00000594673 NACADO15069 1562 aa31.67■■■□□ 2.66
NUP62-204ENST00000594673 ZCCHC6Q5VYS8 1495 aaKnown RBP31.64■■■□□ 2.66
NUP62-204ENST00000594673 RB1CC1Q8TDY2 1594 aa31.64■■■□□ 2.65
NUP62-204ENST00000594673 MYO15BQ96JP2 1530 aa31.58■■■□□ 2.65
NUP62-204ENST00000594673 DCAF1Q9Y4B6 1507 aa31.49■■■□□ 2.63
NUP62-204ENST00000594673 UNC13AQ9UPW8 1703 aa30.77■■■□□ 2.52
NUP62-204ENST00000594673 PABPN1Q86U42 306 aaKnown RBP eCLIP30.67■■■□□ 2.5
NUP62-204ENST00000594673 SCRIBQ14160 1630 aa30.65■■■□□ 2.5
NUP62-204ENST00000594673 BICRAQ9NZM4 1560 aa30.59■■■□□ 2.49
NUP62-204ENST00000594673 SHROOM4Q9ULL8 1493 aa30.42■■■□□ 2.46
NUP62-204ENST00000594673 DNAJC5BQ9UF47 199 aa29.92■■■□□ 2.38
NUP62-204ENST00000594673 EIF4G1Q04637 1599 aaKnown RBP29.8■■■□□ 2.36
NUP62-204ENST00000594673 CC2D2AQ9P2K1 1620 aa29.63■■■□□ 2.33
NUP62-204ENST00000594673 CECR2Q9BXF3 1484 aa29.52■■■□□ 2.32
NUP62-204ENST00000594673 BAZ1AQ9NRL2 1556 aaPredicted RBP29.43■■■□□ 2.3
NUP62-204ENST00000594673 SMARCA4P51532 1647 aa29.38■■■□□ 2.29
NUP62-204ENST00000594673 NCAPD3P42695 1498 aa29.23■■■□□ 2.27
NUP62-204ENST00000594673 ATAD2BQ9ULI0 1458 aa29.23■■■□□ 2.27
NUP62-204ENST00000594673 SMARCA2P51531 1590 aa29.22■■■□□ 2.27
NUP62-204ENST00000594673 MROH2BQ7Z745 1585 aa29.22■■■□□ 2.27
NUP62-204ENST00000594673 PEG3Q9GZU2 1588 aa29.14■■■□□ 2.26
NUP62-204ENST00000594673 HMGXB3Q12766 1538 aa29.05■■■□□ 2.24
NUP62-204ENST00000594673 BAZ1BQ9UIG0 1483 aaKnown RBP29■■■□□ 2.23
NUP62-204ENST00000594673 RSF1Q96T23 1441 aaPredicted RBP29■■■□□ 2.23
NUP62-204ENST00000594673 WIZO95785 1651 aa28.89■■■□□ 2.21
NUP62-204ENST00000594673 TOP2AP11388 1531 aaKnown RBP28.64■■■□□ 2.18
NUP62-204ENST00000594673 SUPT5HO00267 1087 aaKnown RBP28.43■■■□□ 2.14
NUP62-204ENST00000594673 CADPSQ9ULU8 1353 aa28.4■■■□□ 2.14
NUP62-204ENST00000594673 LAMC3Q9Y6N6 1575 aa28.4■■■□□ 2.14
NUP62-204ENST00000594673 NESP48681 1621 aa28.36■■■□□ 2.13
NUP62-204ENST00000594673 CCDC88BA6NC98 1476 aa28.34■■■□□ 2.13
NUP62-204ENST00000594673 PDS5BQ9NTI5 1447 aa28.26■■■□□ 2.12
NUP62-204ENST00000594673 ERCC6Q03468 1493 aa28.26■■■□□ 2.11
NUP62-204ENST00000594673 CFTRP13569 1480 aa28.24■■■□□ 2.11
NUP62-204ENST00000594673 FANCD2Q9BXW9 1451 aa28.02■■■□□ 2.08
NUP62-204ENST00000594673 KIF21AQ7Z4S6 1674 aa28■■■□□ 2.07
NUP62-204ENST00000594673 CEP164Q9UPV0 1460 aa27.96■■■□□ 2.07
NUP62-204ENST00000594673 PRDM2Q13029 1718 aa27.93■■■□□ 2.06
NUP62-204ENST00000594673 CUX2O14529 1486 aa27.93■■■□□ 2.06
NUP62-204ENST00000594673 MRC2Q9UBG0 1479 aa27.89■■■□□ 2.05
NUP62-204ENST00000594673 THOC2Q8NI27 1593 aaKnown RBP27.88■■■□□ 2.05
NUP62-204ENST00000594673 WDR62O43379 1518 aa27.77■■■□□ 2.04
NUP62-204ENST00000594673 ABCC8Q09428 1581 aa27.7■■■□□ 2.03
NUP62-204ENST00000594673 URB2Q14146 1524 aaKnown RBP27.68■■■□□ 2.02
NUP62-204ENST00000594673 TOPBP1Q92547 1522 aa27.57■■■□□ 2
NUP62-204ENST00000594673 DNMBPQ6XZF7 1577 aa27.56■■■□□ 2
NUP62-204ENST00000594673 IFT140Q96RY7 1462 aa27.41■■□□□ 1.98
NUP62-204ENST00000594673 CUX1P39880 1505 aa27.4■■□□□ 1.98
NUP62-204ENST00000594673 WRNQ14191 1432 aaPredicted RBP eCLIP27.35■■□□□ 1.97
NUP62-204ENST00000594673 POLA1P09884 1462 aaPredicted RBP27.35■■□□□ 1.97
NUP62-204ENST00000594673 SOGA1O94964 1423 aa27.31■■□□□ 1.96
NUP62-204ENST00000594673 FGD5Q6ZNL6 1462 aa27.3■■□□□ 1.96
NUP62-204ENST00000594673 TOP2BQ02880 1626 aa27.24■■□□□ 1.95
NUP62-204ENST00000594673 TARBP1Q13395 1621 aaKnown RBP27.23■■□□□ 1.95
NUP62-204ENST00000594673 BIVM-ERCC5R4GMW8 1640 aa27.22■■□□□ 1.95
NUP62-204ENST00000594673 RAD54L2Q9Y4B4 1467 aa27.21■■□□□ 1.95
NUP62-204ENST00000594673 SYNJ1O43426 1573 aa27.18■■□□□ 1.94
NUP62-204ENST00000594673 ZNF608Q9ULD9 1512 aaPredicted RBP27.18■■□□□ 1.94
NUP62-204ENST00000594673 WDR97A6NE52 1622 aa27.11■■□□□ 1.93
NUP62-204ENST00000594673 AQRO60306 1485 aaKnown RBP eCLIP27.1■■□□□ 1.931e-7■■■□□ 18.3
NUP62-204ENST00000594673 TDRD9Q8NDG6 1382 aaKnown RBP27.09■■□□□ 1.93
NUP62-204ENST00000594673 ABCA10Q8WWZ4 1543 aa27.09■■□□□ 1.93
NUP62-204ENST00000594673 EIF4G3O43432 1585 aaKnown RBP27.06■■□□□ 1.92
NUP62-204ENST00000594673 GAPVD1Q14C86 1478 aa26.97■■□□□ 1.91
NUP62-204ENST00000594673 GRIN2BQ13224 1484 aa26.95■■□□□ 1.91
NUP62-204ENST00000594673 TRIM41Q8WV44 630 aa26.91■■□□□ 1.9
NUP62-204ENST00000594673 DNAJC5Q9H3Z4 198 aa26.91■■□□□ 1.9
NUP62-204ENST00000594673 ABCA5Q8WWZ7 1642 aa26.9■■□□□ 1.9
NUP62-204ENST00000594673 OSCARQ8IYS5 282 aa26.89■■□□□ 1.9
NUP62-204ENST00000594673 MAGI1Q96QZ7 1491 aaPredicted RBP26.86■■□□□ 1.89
NUP62-204ENST00000594673 SNAPC4Q5SXM2 1469 aa26.82■■□□□ 1.88
NUP62-204ENST00000594673 KIF27Q86VH2 1401 aa26.81■■□□□ 1.88
NUP62-204ENST00000594673 FBLN2P98095 1184 aa26.8■■□□□ 1.88
NUP62-204ENST00000594673 CHMP7Q8WUX9 453 aaPredicted RBP26.8■■□□□ 1.88
NUP62-204ENST00000594673 PBRM1Q86U86 1689 aa26.79■■□□□ 1.88
NUP62-204ENST00000594673 ERICH3Q5RHP9 1530 aa26.78■■□□□ 1.88
NUP62-204ENST00000594673 SYNJ2O15056 1496 aa26.74■■□□□ 1.87
NUP62-204ENST00000594673 FHAD1B1AJZ9 1412 aa26.69■■□□□ 1.86
NUP62-204ENST00000594673 IGF1RP08069 1367 aa26.68■■□□□ 1.86
NUP62-204ENST00000594673 CHD1O14646 1710 aa26.66■■□□□ 1.86
NUP62-204ENST00000594673 CHIC1Q5VXU3 224 aa26.66■■□□□ 1.86
NUP62-204ENST00000594673 ADAMTS12P58397 1594 aa26.61■■□□□ 1.85
NUP62-204ENST00000594673 GRIN2AQ12879 1464 aa26.56■■□□□ 1.84
NUP62-204ENST00000594673 CUL7Q14999 1698 aa26.54■■□□□ 1.84
NUP62-204ENST00000594673 CARMIL1Q5VZK9 1371 aa26.53■■□□□ 1.84
NUP62-204ENST00000594673 RUSC2Q8N2Y8 1516 aa26.51■■□□□ 1.83
NUP62-204ENST00000594673 NUP160Q12769 1436 aa26.46■■□□□ 1.83
NUP62-204ENST00000594673 EEA1Q15075 1411 aa26.45■■□□□ 1.82
NUP62-204ENST00000594673 CLASP1Q7Z460 1538 aa26.44■■□□□ 1.82
NUP62-204ENST00000594673 CSRNP3Q8WYN3 585 aa26.4■■□□□ 1.82
NUP62-204ENST00000594673 RAPGEF2Q9Y4G8 1499 aa26.37■■□□□ 1.81
NUP62-204ENST00000594673 CEP170Q5SW79 1584 aa26.37■■□□□ 1.81
NUP62-204ENST00000594673 ARHGEF11O15085 1522 aa26.3■■□□□ 1.8
NUP62-204ENST00000594673 PRXQ9BXM0 1461 aa26.3■■□□□ 1.8
NUP62-204ENST00000594673 KIAA0586Q9BVV6 1533 aa26.29■■□□□ 1.8
NUP62-204ENST00000594673 JPH4Q96JJ6 628 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms