RNA–Protein interactions for RNA: ENST00000316891.9

TRIT1-201, Transcript of tRNA isopentenyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIT1, Length 2,112 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-201ENST00000316891 NISCHQ9Y2I1 1504 aa29.51■■■□□ 2.31
TRIT1-201ENST00000316891 CCDC180Q9P1Z9 1646 aa25.87■■□□□ 1.73
TRIT1-201ENST00000316891 ZCCHC6Q5VYS8 1495 aaKnown RBP24.77■■□□□ 1.56
TRIT1-201ENST00000316891 ABCC9O60706 1549 aa24.55■■□□□ 1.52
TRIT1-201ENST00000316891 DCAF1Q9Y4B6 1507 aa24.44■■□□□ 1.5
TRIT1-201ENST00000316891 DCAF8L2P0C7V8 631 aa24.26■■□□□ 1.47
TRIT1-201ENST00000316891 MYO15BQ96JP2 1530 aa24.24■■□□□ 1.47
TRIT1-201ENST00000316891 NACADO15069 1562 aa24.11■■□□□ 1.45
TRIT1-201ENST00000316891 RB1CC1Q8TDY2 1594 aa23.93■■□□□ 1.42
TRIT1-201ENST00000316891 SHROOM4Q9ULL8 1493 aa23.81■■□□□ 1.4
TRIT1-201ENST00000316891 SCRIBQ14160 1630 aa23.69■■□□□ 1.38
TRIT1-201ENST00000316891 UNC13AQ9UPW8 1703 aa23.49■■□□□ 1.35
TRIT1-201ENST00000316891 BICRAQ9NZM4 1560 aa23.26■■□□□ 1.31
TRIT1-201ENST00000316891 PABPN1Q86U42 306 aaKnown RBP eCLIP23.07■■□□□ 1.28
TRIT1-201ENST00000316891 CECR2Q9BXF3 1484 aa22.92■■□□□ 1.26
TRIT1-201ENST00000316891 RSF1Q96T23 1441 aaPredicted RBP22.8■■□□□ 1.24
TRIT1-201ENST00000316891 BAZ1AQ9NRL2 1556 aaPredicted RBP22.79■■□□□ 1.24
TRIT1-201ENST00000316891 SUPT5HO00267 1087 aaKnown RBP22.78■■□□□ 1.24
TRIT1-201ENST00000316891 MROH2BQ7Z745 1585 aa22.78■■□□□ 1.24
TRIT1-201ENST00000316891 SMARCA4P51532 1647 aa22.73■■□□□ 1.23
TRIT1-201ENST00000316891 WIZO95785 1651 aa22.58■■□□□ 1.2
TRIT1-201ENST00000316891 EIF4G1Q04637 1599 aaKnown RBP22.55■■□□□ 1.2
TRIT1-201ENST00000316891 PEG3Q9GZU2 1588 aa22.51■■□□□ 1.19
TRIT1-201ENST00000316891 ATAD2BQ9ULI0 1458 aa22.4■■□□□ 1.18
TRIT1-201ENST00000316891 SMARCA2P51531 1590 aa22.38■■□□□ 1.17
TRIT1-201ENST00000316891 TOP2AP11388 1531 aaKnown RBP22.36■■□□□ 1.17
TRIT1-201ENST00000316891 NCAPD3P42695 1498 aa22.26■■□□□ 1.15
TRIT1-201ENST00000316891 CC2D2AQ9P2K1 1620 aa22.25■■□□□ 1.15
TRIT1-201ENST00000316891 BAZ1BQ9UIG0 1483 aaKnown RBP22.24■■□□□ 1.15
TRIT1-201ENST00000316891 HMGXB3Q12766 1538 aa22.22■■□□□ 1.15
TRIT1-201ENST00000316891 CCDC88BA6NC98 1476 aa22.1■■□□□ 1.13
TRIT1-201ENST00000316891 DNAJC5BQ9UF47 199 aa21.84■■□□□ 1.09
TRIT1-201ENST00000316891 CHIC1Q5VXU3 224 aa21.76■■□□□ 1.07
TRIT1-201ENST00000316891 CFTRP13569 1480 aa21.7■■□□□ 1.06
TRIT1-201ENST00000316891 CADPSQ9ULU8 1353 aa21.64■■□□□ 1.05
TRIT1-201ENST00000316891 PRDM2Q13029 1718 aa21.61■■□□□ 1.05
TRIT1-201ENST00000316891 ABCC8Q09428 1581 aa21.56■■□□□ 1.04
TRIT1-201ENST00000316891 LAMC3Q9Y6N6 1575 aa21.53■■□□□ 1.04
TRIT1-201ENST00000316891 NESP48681 1621 aa21.51■■□□□ 1.03
TRIT1-201ENST00000316891 TRIM41Q8WV44 630 aa21.46■■□□□ 1.03
TRIT1-201ENST00000316891 WRNQ14191 1432 aaPredicted RBP eCLIP21.45■■□□□ 1.021e-6■■■■■ 58.5
TRIT1-201ENST00000316891 FANCD2Q9BXW9 1451 aa21.4■■□□□ 1.02
TRIT1-201ENST00000316891 SYNJ1O43426 1573 aa21.4■■□□□ 1.02
TRIT1-201ENST00000316891 TOP2BQ02880 1626 aa21.34■■□□□ 1.01
TRIT1-201ENST00000316891 BIVM-ERCC5R4GMW8 1640 aa21.33■■□□□ 1.01
TRIT1-201ENST00000316891 PDS5BQ9NTI5 1447 aa21.33■■□□□ 1
TRIT1-201ENST00000316891 CUX1P39880 1505 aa21.32■■□□□ 1
TRIT1-201ENST00000316891 CEP164Q9UPV0 1460 aa21.29■■□□□ 1
TRIT1-201ENST00000316891 KIF21AQ7Z4S6 1674 aa21.28■■□□□ 1
TRIT1-201ENST00000316891 DNMBPQ6XZF7 1577 aa21.2■□□□□ 0.98
TRIT1-201ENST00000316891 URB2Q14146 1524 aaKnown RBP21.16■□□□□ 0.98
TRIT1-201ENST00000316891 TOPBP1Q92547 1522 aa21.16■□□□□ 0.98
TRIT1-201ENST00000316891 FGD5Q6ZNL6 1462 aa21.1■□□□□ 0.97
TRIT1-201ENST00000316891 SOGA1O94964 1423 aa21.1■□□□□ 0.97
TRIT1-201ENST00000316891 MRC2Q9UBG0 1479 aa21.09■□□□□ 0.97
TRIT1-201ENST00000316891 ERCC6Q03468 1493 aa21.05■□□□□ 0.96
TRIT1-201ENST00000316891 RUSC2Q8N2Y8 1516 aa21.04■□□□□ 0.96
TRIT1-201ENST00000316891 POLA1P09884 1462 aaPredicted RBP21.04■□□□□ 0.96
TRIT1-201ENST00000316891 EEA1Q15075 1411 aa21.04■□□□□ 0.96
TRIT1-201ENST00000316891 WDR62O43379 1518 aa21.02■□□□□ 0.96
TRIT1-201ENST00000316891 FAM9AQ8IZU1 332 aaPredicted RBP21.02■□□□□ 0.96
TRIT1-201ENST00000316891 THOC2Q8NI27 1593 aaKnown RBP21.01■□□□□ 0.95
TRIT1-201ENST00000316891 RAD54L2Q9Y4B4 1467 aa20.94■□□□□ 0.94
TRIT1-201ENST00000316891 ABCA10Q8WWZ4 1543 aa20.93■□□□□ 0.94
TRIT1-201ENST00000316891 WDR97A6NE52 1622 aa20.92■□□□□ 0.94
TRIT1-201ENST00000316891 KIF27Q86VH2 1401 aa20.92■□□□□ 0.94
TRIT1-201ENST00000316891 CUX2O14529 1486 aa20.9■□□□□ 0.94
TRIT1-201ENST00000316891 CSRNP3Q8WYN3 585 aa20.9■□□□□ 0.94
TRIT1-201ENST00000316891 TARBP1Q13395 1621 aaKnown RBP20.89■□□□□ 0.93
TRIT1-201ENST00000316891 LOC105371045A0A1W2PR82 267 aa20.88■□□□□ 0.93
TRIT1-201ENST00000316891 KIF21BO75037 1637 aa20.8■□□□□ 0.92
TRIT1-201ENST00000316891 ABCA5Q8WWZ7 1642 aa20.8■□□□□ 0.92
TRIT1-201ENST00000316891 IFT140Q96RY7 1462 aa20.8■□□□□ 0.92
TRIT1-201ENST00000316891 PRXQ9BXM0 1461 aa20.77■□□□□ 0.91
TRIT1-201ENST00000316891 IGF1RP08069 1367 aa20.76■□□□□ 0.91
TRIT1-201ENST00000316891 TDRD9Q8NDG6 1382 aaKnown RBP20.74■□□□□ 0.91
TRIT1-201ENST00000316891 GOLGA3Q08378 1498 aa20.73■□□□□ 0.91
TRIT1-201ENST00000316891 GAPVD1Q14C86 1478 aa20.71■□□□□ 0.91
TRIT1-201ENST00000316891 ERICH3Q5RHP9 1530 aa20.7■□□□□ 0.9
TRIT1-201ENST00000316891 RAPGEF2Q9Y4G8 1499 aa20.7■□□□□ 0.9
TRIT1-201ENST00000316891 EHMT2Q96KQ7 1210 aa20.69■□□□□ 0.9
TRIT1-201ENST00000316891 ZNF608Q9ULD9 1512 aaPredicted RBP20.69■□□□□ 0.9
TRIT1-201ENST00000316891 CUL7Q14999 1698 aa20.65■□□□□ 0.9
TRIT1-201ENST00000316891 AQRO60306 1485 aaKnown RBP eCLIP20.65■□□□□ 0.95e-7■■■■□ 26.4
TRIT1-201ENST00000316891 PBRM1Q86U86 1689 aa20.64■□□□□ 0.9
TRIT1-201ENST00000316891 CARMIL1Q5VZK9 1371 aa20.64■□□□□ 0.89
TRIT1-201ENST00000316891 EIF4G3O43432 1585 aaKnown RBP20.63■□□□□ 0.89
TRIT1-201ENST00000316891 TNIKQ9UKE5 1360 aa20.62■□□□□ 0.89
TRIT1-201ENST00000316891 GRIN2BQ13224 1484 aa20.59■□□□□ 0.89
TRIT1-201ENST00000316891 UBTFP17480 764 aaKnown RBP20.56■□□□□ 0.88
TRIT1-201ENST00000316891 ADAMTS12P58397 1594 aa20.53■□□□□ 0.88
TRIT1-201ENST00000316891 FHAD1B1AJZ9 1412 aa20.5■□□□□ 0.87
TRIT1-201ENST00000316891 CEP162Q5TB80 1403 aa20.49■□□□□ 0.87
TRIT1-201ENST00000316891 SNAPC4Q5SXM2 1469 aa20.48■□□□□ 0.87
TRIT1-201ENST00000316891 MAGI1Q96QZ7 1491 aaPredicted RBP20.46■□□□□ 0.87
TRIT1-201ENST00000316891 CTTNBP2Q8WZ74 1663 aa20.39■□□□□ 0.85
TRIT1-201ENST00000316891 CLIP1P30622 1438 aa20.38■□□□□ 0.85
TRIT1-201ENST00000316891 SYNJ2O15056 1496 aa20.37■□□□□ 0.85
TRIT1-201ENST00000316891 GRIN2AQ12879 1464 aa20.35■□□□□ 0.85
TRIT1-201ENST00000316891 ARHGAP35Q9NRY4 1499 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms