RNA–Protein interactions for RNA: ENST00000462797.5

TRIT1-205, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 5

Gene TRIT1, Length 2,000 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-205ENST00000462797 NISCHQ9Y2I1 1504 aa26.86■■□□□ 1.89
TRIT1-205ENST00000462797 CCDC180Q9P1Z9 1646 aa23.37■■□□□ 1.33
TRIT1-205ENST00000462797 ZCCHC6Q5VYS8 1495 aaKnown RBP22.55■■□□□ 1.2
TRIT1-205ENST00000462797 ABCC9O60706 1549 aa22.37■■□□□ 1.17
TRIT1-205ENST00000462797 DCAF8L2P0C7V8 631 aa22.36■■□□□ 1.17
TRIT1-205ENST00000462797 HRCP23327 699 aa22.17■■□□□ 1.14
TRIT1-205ENST00000462797 DCAF1Q9Y4B6 1507 aa22.1■■□□□ 1.13
TRIT1-205ENST00000462797 SHROOM4Q9ULL8 1493 aa22.05■■□□□ 1.12
TRIT1-205ENST00000462797 SUPT5HO00267 1087 aaKnown RBP21.91■■□□□ 1.1
TRIT1-205ENST00000462797 MYO15BQ96JP2 1530 aa21.84■■□□□ 1.09
TRIT1-205ENST00000462797 NACADO15069 1562 aa21.79■■□□□ 1.08
TRIT1-205ENST00000462797 CHIC1Q5VXU3 224 aa21.69■■□□□ 1.06
TRIT1-205ENST00000462797 SCRIBQ14160 1630 aa21.65■■□□□ 1.06
TRIT1-205ENST00000462797 RB1CC1Q8TDY2 1594 aa21.65■■□□□ 1.06
TRIT1-205ENST00000462797 PCGF6Q9BYE7 350 aa21.63■■□□□ 1.05
TRIT1-205ENST00000462797 PPARGC1BQ86YN6 1023 aaKnown RBP21.45■■□□□ 1.02
TRIT1-205ENST00000462797 PELP1Q8IZL8 1130 aaKnown RBP21.35■■□□□ 1.01
TRIT1-205ENST00000462797 UNC13AQ9UPW8 1703 aa21.31■■□□□ 1
TRIT1-205ENST00000462797 TRIM26Q12899 539 aaPredicted RBP21.17■□□□□ 0.98
TRIT1-205ENST00000462797 PABPN1Q86U42 306 aaKnown RBP eCLIP21.14■□□□□ 0.97
TRIT1-205ENST00000462797 BICRAQ9NZM4 1560 aa21.11■□□□□ 0.97
TRIT1-205ENST00000462797 ZEB1P37275 1124 aaPredicted RBP21.07■□□□□ 0.96
TRIT1-205ENST00000462797 LOC105371045A0A1W2PR82 267 aa21■□□□□ 0.95
TRIT1-205ENST00000462797 CECR2Q9BXF3 1484 aa20.99■□□□□ 0.95
TRIT1-205ENST00000462797 RSF1Q96T23 1441 aaPredicted RBP20.85■□□□□ 0.93
TRIT1-205ENST00000462797 MROH2BQ7Z745 1585 aa20.83■□□□□ 0.92
TRIT1-205ENST00000462797 SCAF1Q9H7N4 1312 aaKnown RBP20.78■□□□□ 0.92
TRIT1-205ENST00000462797 BAZ1AQ9NRL2 1556 aaPredicted RBP20.7■□□□□ 0.9
TRIT1-205ENST00000462797 SMARCA4P51532 1647 aa20.67■□□□□ 0.9
TRIT1-205ENST00000462797 WIZO95785 1651 aa20.66■□□□□ 0.9
TRIT1-205ENST00000462797 MYT1Q01538 1121 aa20.56■□□□□ 0.88
TRIT1-205ENST00000462797 EIF4G1Q04637 1599 aaKnown RBP20.44■□□□□ 0.86
TRIT1-205ENST00000462797 TRIM41Q8WV44 630 aa20.43■□□□□ 0.86
TRIT1-205ENST00000462797 ACIN1Q9UKV3 1341 aaKnown RBP20.42■□□□□ 0.86
TRIT1-205ENST00000462797 ATAD2BQ9ULI0 1458 aa20.37■□□□□ 0.85
TRIT1-205ENST00000462797 PEG3Q9GZU2 1588 aa20.36■□□□□ 0.85
TRIT1-205ENST00000462797 TOP2AP11388 1531 aaKnown RBP20.35■□□□□ 0.85
TRIT1-205ENST00000462797 SMARCA2P51531 1590 aa20.27■□□□□ 0.84
TRIT1-205ENST00000462797 NEUROD1Q13562 356 aa20.26■□□□□ 0.83
TRIT1-205ENST00000462797 CENPBP07199 599 aaPredicted RBP20.24■□□□□ 0.83
TRIT1-205ENST00000462797 BAZ1BQ9UIG0 1483 aaKnown RBP20.23■□□□□ 0.83
TRIT1-205ENST00000462797 CCDC88BA6NC98 1476 aa20.2■□□□□ 0.82
TRIT1-205ENST00000462797 CC2D2AQ9P2K1 1620 aa20.19■□□□□ 0.82
TRIT1-205ENST00000462797 FAM9AQ8IZU1 332 aaPredicted RBP20.19■□□□□ 0.82
TRIT1-205ENST00000462797 NCAPD3P42695 1498 aa20.15■□□□□ 0.82
TRIT1-205ENST00000462797 GTF3C3Q9Y5Q9 886 aa20.14■□□□□ 0.81
TRIT1-205ENST00000462797 CCER1Q8TC90 406 aaPredicted RBP20.12■□□□□ 0.81
TRIT1-205ENST00000462797 DIEXFQ68CQ4 756 aaKnown RBP20.11■□□□□ 0.81
TRIT1-205ENST00000462797 HMGXB3Q12766 1538 aa20.09■□□□□ 0.81
TRIT1-205ENST00000462797 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.08■□□□□ 0.8
TRIT1-205ENST00000462797 EHMT2Q96KQ7 1210 aa19.92■□□□□ 0.78
TRIT1-205ENST00000462797 DNAJC5BQ9UF47 199 aa19.92■□□□□ 0.78
TRIT1-205ENST00000462797 WRNQ14191 1432 aaPredicted RBP eCLIP19.91■□□□□ 0.781e-6■■■■■ 58.5
TRIT1-205ENST00000462797 ZNF316A6NFI3 1004 aaPredicted RBP19.82■□□□□ 0.76
TRIT1-205ENST00000462797 ABCC8Q09428 1581 aa19.82■□□□□ 0.76
TRIT1-205ENST00000462797 CFTRP13569 1480 aa19.71■□□□□ 0.75
TRIT1-205ENST00000462797 CEP162Q5TB80 1403 aa19.68■□□□□ 0.74
TRIT1-205ENST00000462797 CADPSQ9ULU8 1353 aa19.66■□□□□ 0.74
TRIT1-205ENST00000462797 NESP48681 1621 aa19.65■□□□□ 0.74
TRIT1-205ENST00000462797 TNIKQ9UKE5 1360 aa19.65■□□□□ 0.74
TRIT1-205ENST00000462797 SYNJ1O43426 1573 aa19.58■□□□□ 0.73
TRIT1-205ENST00000462797 YTHDC1Q96MU7 727 aaKnown RBP19.58■□□□□ 0.72
TRIT1-205ENST00000462797 EEA1Q15075 1411 aa19.57■□□□□ 0.72
TRIT1-205ENST00000462797 MIER1Q8N108 512 aa19.56■□□□□ 0.72
TRIT1-205ENST00000462797 CLSPNQ9HAW4 1339 aa19.55■□□□□ 0.72
TRIT1-205ENST00000462797 PRDM2Q13029 1718 aa19.54■□□□□ 0.72
TRIT1-205ENST00000462797 TTBK1Q5TCY1 1321 aaPredicted RBP19.48■□□□□ 0.71
TRIT1-205ENST00000462797 FANCD2Q9BXW9 1451 aa19.47■□□□□ 0.71
TRIT1-205ENST00000462797 CUX1P39880 1505 aa19.46■□□□□ 0.71
TRIT1-205ENST00000462797 LAMC3Q9Y6N6 1575 aa19.46■□□□□ 0.71
TRIT1-205ENST00000462797 TOP2BQ02880 1626 aa19.42■□□□□ 0.7
TRIT1-205ENST00000462797 SOGA1O94964 1423 aa19.42■□□□□ 0.7
TRIT1-205ENST00000462797 CSRNP3Q8WYN3 585 aa19.41■□□□□ 0.7
TRIT1-205ENST00000462797 GOLGA3Q08378 1498 aa19.41■□□□□ 0.7
TRIT1-205ENST00000462797 BIVM-ERCC5R4GMW8 1640 aa19.4■□□□□ 0.7
TRIT1-205ENST00000462797 RUSC2Q8N2Y8 1516 aa19.39■□□□□ 0.69
TRIT1-205ENST00000462797 UBTFP17480 764 aaKnown RBP19.35■□□□□ 0.69
TRIT1-205ENST00000462797 KIF21AQ7Z4S6 1674 aa19.34■□□□□ 0.69
TRIT1-205ENST00000462797 CEP164Q9UPV0 1460 aa19.33■□□□□ 0.68
TRIT1-205ENST00000462797 PDS5BQ9NTI5 1447 aa19.32■□□□□ 0.68
TRIT1-205ENST00000462797 SUPT16HQ9Y5B9 1047 aaKnown RBP19.27■□□□□ 0.68
TRIT1-205ENST00000462797 URB2Q14146 1524 aaKnown RBP19.27■□□□□ 0.68
TRIT1-205ENST00000462797 HNRNPUL2Q1KMD3 747 aaKnown RBP19.27■□□□□ 0.67
TRIT1-205ENST00000462797 TOPBP1Q92547 1522 aa19.25■□□□□ 0.67
TRIT1-205ENST00000462797 FGD5Q6ZNL6 1462 aa19.24■□□□□ 0.67
TRIT1-205ENST00000462797 KIF21BO75037 1637 aa19.24■□□□□ 0.67
TRIT1-205ENST00000462797 DNMBPQ6XZF7 1577 aa19.24■□□□□ 0.67
TRIT1-205ENST00000462797 VPS8Q8N3P4 1428 aa19.21■□□□□ 0.67
TRIT1-205ENST00000462797 CLIP1P30622 1438 aa19.18■□□□□ 0.66
TRIT1-205ENST00000462797 ANP32EQ9BTT0 268 aa19.17■□□□□ 0.66
TRIT1-205ENST00000462797 POLA1P09884 1462 aaPredicted RBP19.17■□□□□ 0.66
TRIT1-205ENST00000462797 RAD54L2Q9Y4B4 1467 aa19.16■□□□□ 0.66
TRIT1-205ENST00000462797 TSHZ2Q9NRE2 1034 aa19.14■□□□□ 0.65
TRIT1-205ENST00000462797 APLP2Q06481 763 aa19.12■□□□□ 0.65
TRIT1-205ENST00000462797 ERCC6Q03468 1493 aa19.11■□□□□ 0.65
TRIT1-205ENST00000462797 MRC2Q9UBG0 1479 aa19.11■□□□□ 0.65
TRIT1-205ENST00000462797 CUX2O14529 1486 aa19.1■□□□□ 0.65
TRIT1-205ENST00000462797 DHX57Q6P158 1386 aaKnown RBP19.09■□□□□ 0.65
TRIT1-205ENST00000462797 KIF27Q86VH2 1401 aa19.07■□□□□ 0.64
TRIT1-205ENST00000462797 ABCA10Q8WWZ4 1543 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms